New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3603646 =	38 (1.070)	6 (0.180)	5/238	3.1	15.3%	coding (598/1494 nt)	ftsY	Signal Recognition Particle (SRP) receptor
	?	NC_000913	3603693 =	30 (0.880)					coding (551/1494 nt)	ftsY	Signal Recognition Particle (SRP) receptor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAATTTTACGTGTGGTTTCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCA  >  NC_000913/3603498‑3603780                                                                                                                                                     |                                                                                                                                       aTAATTTTACGTGTGGTTTCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGttt                                                                                                                                        >  3:71632/1‑149 (MQ=255)    aTTTTACGTGTGGTTTCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAg                                                                                                                                     <  6:72990/149‑1 (MQ=255)                gTTTCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGaaaaa                                                                                                                         >  4:75562/1‑149 (MQ=255)                  ttCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAAc                                                                                                                       >  5:6281/1‑149 (MQ=255)                     cacaCCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGACCCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACctt                                                                                                                    >  8:62337/1‑149 (MQ=255)                     cacaCCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACctt                                                                                                                    <  6:6281/149‑1 (MQ=255)                      acacCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACcttc                                                                                                                   <  3:75562/149‑1 (MQ=255)                          ccACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTg                                                                                                               >  6:80431/1‑149 (MQ=255)                               tCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCgg                                                                                                          >  1:199770/1‑149 (MQ=255)                                 ggCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAAc                                                                                                                       <  1:72867/134‑1 (MQ=255)                                 ggCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAAc                                                                                                                       >  2:72867/1‑134 (MQ=255)                                      tCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTcc                                                                                                   >  5:18482/1‑149 (MQ=255)                                         aaaGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGc                                                                                                >  4:100104/1‑149 (MQ=255)                                         aaaGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGc                                                                                                <  5:80431/149‑1 (MQ=255)                                           aGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTc                                                                                              <  3:16561/149‑1 (MQ=255)                                                     ccAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGa                                                                                      <  6:18482/147‑1 (MQ=255)                                                              cAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGgcgcgc                                                                                                                               <  7:23870/97‑1 (MQ=255)                                                              cAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGgcgcgc                                                                                                                               >  8:23870/1‑97 (MQ=255)                                                               aaaCAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCa                                                                             <  4:40820/146‑1 (MQ=255)                                                               aaaCAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCa                                                                             >  3:40820/1‑146 (MQ=255)                                                                         tcgtcgATTTTTTTACCGCGGAACAGGCTGATGAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGgctgc                                                                     >  5:108725/1‑144 (MQ=255)                                                                         tcgtcgATTTTTTTACCGCGGAACAGGCTGATGAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGgctgc                                                                     <  6:108725/144‑1 (MQ=255)                                                                            tcgATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCtcttcttc                                                             <  7:62337/149‑1 (MQ=255)                                                                              gATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCtcttcttct                                                            <  3:100104/148‑1 (MQ=255)                                                                               aTTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACAGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGc                                                          >  6:15457/1‑149 (MQ=255)                                                                                tttttttACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGcc                                                         <  4:71632/149‑1 (MQ=255)                                                                                    tttACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCgga                                                      <  1:41808/148‑1 (MQ=255)                                                                                     ttACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCggag                                                     <  5:15457/148‑1 (MQ=255)                                                                                        ccGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGaa                                                  <  2:199770/148‑1 (MQ=255)                                                                                                   gCTGATAAATCCGGTACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATttct                                                                                 <  1:60371/106‑1 (MQ=255)                                                                                                   gCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCg                                      >  8:25869/1‑149 (MQ=255)                                                                                                             ccGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGgc                                                                                                                                   >  7:77479/1‑46 (MQ=255)                                                                                                             ccGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGgc                                                                                                                                   <  8:77479/46‑1 (MQ=255)                                                                                                             ccGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGc                            >  7:5048/1‑149 (MQ=255)                                                                                                               ggAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCg                          >  4:83432/1‑149 (MQ=255)                                                                                                                              tttGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAgcg           >  5:13869/1‑149 (MQ=255)                                                                                                                                  gTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGt       <  8:5048/149‑1 (MQ=255)                                                                                                                                        aaCAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCa  <  6:13869/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                       ATAATTTTACGTGTGGTTTCCACACCCACATCGGCGATCAAAAGCTGCTCTTCCAGCTCCTCAAACAGATCATCGTCGATTTTTTTACCGCGGAACAGGCTGATAAATCCGGAACCGAGATTTTCTTTGGTTTTTAACAGGCTGCGTTTCAGGCGCGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCA  >  NC_000913/3603498‑3603780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.