| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 756106 = | 9 (0.250) | 25 (0.720) | 21/240 | 0.7 | 82.4% | coding (200/1767 nt) | sdhA | succinate dehydrogenase, flavoprotein subunit |
| ? | NC_000913 | 756221 = | 2 (0.060) | coding (315/1767 nt) | sdhA | succinate dehydrogenase, flavoprotein subunit | |||||
GCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTC > NC_000913/755958‑756231 | tcaGGTATGCGCGCGGCGCTGCAAATATCAAAGATCGGACATACATGAGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCAGCGCAAGTCGGCATTACCGTTTCGCTGGGAAATACCCAAGAAGATAACTGCGAATG > 2:138224‑M1/2‑149 (MQ=255)gCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATG > 8:71932‑M1/1‑149 (MQ=255) gttctgctgataaagcgtgtgcaacagtgcgtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCa > 3:72182‑M1/146‑149 (MQ=255) ctgataaagcgtgtgcaacagtgagtgcccggtagggtcagctgctgacgaagtgcgtgcagcctgctcgccgccgaagtttttcgactgaccgccaaactgactgtgatagatactaccatcatcgagacgcgagaacGGCATATGt > 8:28586‑M1/140‑148 (MQ=255) tgataaagcgtgtgcaacagtgcgtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGc < 8:13110‑M1/3‑1 (MQ=255) tgataaagcgtgtgcaacagtgcgtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGc > 7:13110‑M1/139‑141 (MQ=255) aagcgtgtgcaacagtgcgtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGaca > 1:154004‑M1/134‑148 (MQ=255) gCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagt > 1:168501‑M1/1‑132 (MQ=255) caacagtgcgtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAgg < 6:159154‑M1/25‑1 (MQ=255) gtgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACta < 6:79123‑M1/34‑1 (MQ=255) tgaccggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACta < 3:44827‑M1/34‑1 (MQ=255) cggtacggtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGt > 6:31656‑M1/111‑119 (MQ=255) gtcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCa > 5:79123‑M1/104‑149 (MQ=255) tcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCatat > 6:123257‑M1/103‑109 (MQ=255) tcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCatat < 5:123257‑M1/7‑1 (MQ=255) tcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCa > 6:13677‑M1/103‑106 (MQ=255) tcagctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCa < 5:13677‑M1/4‑1 (MQ=255) gtgCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGC > 1:146461‑M1/1‑105 (MQ=255) gtgCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGC < 2:146461‑M1/105‑1 (MQ=255) gctgctgccgcagtgcgtgccgcctgctcgccgccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGAc > 5:159154‑M1/100‑149 (MQ=255) cgcTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttac < 7:71932‑M1/148‑46 (MQ=255) tgctCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGAcgc > 5:82966/1‑148 (MQ=255) ctctctAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttcca < 2:23573‑M1/119‑22 (MQ=255) ctctctAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttcca > 1:23573‑M1/1‑98 (MQ=255) gTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAatatat < 6:82966/149‑1 (MQ=255) cccGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgt < 2:168501‑M1/147‑64 (MQ=255) ccGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtca > 7:120433‑M1/1‑78 (MQ=255) ttCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACAcc > 8:26156/1‑88 (MQ=255) ttCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACAcc < 7:26156/88‑1 (MQ=255) ccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCg < 2:84043‑M1/39‑1 (MQ=255) ccgaagtttttcgactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCg > 1:84043‑M1/67‑105 (MQ=255) ccGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtcaccgatatagtc < 1:138224‑M1/149‑83 (MQ=255) ccGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtcaccgatatagtc < 8:120433‑M1/149‑83 (MQ=255) gactgaccgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGaa < 8:109510‑M1/95‑1 (MQ=255) gcAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAg > 1:196362‑M1/1‑57 (MQ=255) gcAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAg < 2:196362‑M1/58‑2 (MQ=255) cgccaaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGaa < 5:172887‑M1/101‑1 (MQ=255) caaacggacgttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGAAAAACCGGGCCGGAAGCGATTCTGGAACTCGAAcaca < 5:24419‑M1/105‑1 (MQ=255) aTTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtcaccgatatagtccgaccctttcacggtgtcg > 6:172887‑M1/1‑47 (MQ=255) aTTACCGTTGCGCTGGGTAATA‑CCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTg > 2:23028/1‑84 (MQ=255) aTTACCGTTGCGCTGGGTAATA‑CCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTg < 1:23028/84‑1 (MQ=255) gttgatagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATCTGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGc > 4:44827‑M1/36‑149 (MQ=255) atagatacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGAAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCctgccatt > 6:24419‑M1/32‑146 (MQ=255) atacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAac > 3:123695‑M1/28‑129 (MQ=255) atacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCAttcc < 5:58747‑M1/120‑2 (MQ=255) tacgaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGccattcccag > 6:58747‑M1/27‑145 (MQ=255) gaccatcatcgagacgcgagaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCctgccattcccagtta > 7:109510‑M1/24‑142 (MQ=255) ccATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttcc > 7:10630‑M1/1‑24 (MQ=255) ccATGAAGATAACTGGGAATGGCAggcccatgtgttcgagttcc < 8:10630‑M1/44‑21 (MQ=255) ccATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGAtt > 2:17917/1‑76 (MQ=255) gATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATgg > 6:84123/1‑121 (MQ=255) gATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATgg < 5:84123/121‑1 (MQ=255) tGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtcaccgatatagtccga > 2:9681‑M1/1‑11 (MQ=255) tGGGAATGGCAggcccatgtgttcgagttccagaatcgcttccggcccggttttacacatatattcaatcgcgtcctggtcaccgatatagtccga < 1:9681‑M1/96‑86 (MQ=255) agaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTg > 7:152572‑M1/6‑97 (MQ=255) agaacGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTg < 8:152572‑M1/92‑1 (MQ=255) cGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGc > 1:178041‑M1/2‑79 (MQ=255) cGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGc < 2:178041‑M1/78‑1 (MQ=255) | GCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTC > NC_000913/755958‑756231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |