New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3743832 =	57 (1.570)	6 (0.180)	6/224	2.9	10.7%	coding (90/468 nt)	yiaL	DUF386 family protein
	?	NC_000913	3743855 =	47 (1.380)					coding (113/468 nt)	yiaL	DUF386 family protein
Rejected: Frequency below/above cutoff threshold.

GGCCAAAATCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTAT  >  NC_000913/3743710‑3743996                                                                                                                                                  |                                                                                                                                              ttcgccccccgccagaaactgaatctcgatataccgacgatgcacttccggacggtttaccaccgctgcgcgtgtggttaaatcgatattttgcgtataaatatttttgccgtcgatttcgaCAACGCCCTGGAGCCGGGCGTTGTc                                                                                                                                              >  7:67928‑M1/123‑147 (MQ=255)  gCCAAAATCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGa                                                                                                                                            >  7:83149/1‑148 (MQ=255)     aaaaTCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATc                                                                                                                                        >  1:131318/1‑149 (MQ=255)     aaaaTCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATc                                                                                                                                        <  5:165648/149‑1 (MQ=255)         tCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACg                                                                                                                                    <  8:83149/149‑1 (MQ=255)                gTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCaaaaa                                                                                                                             >  7:53797/1‑149 (MQ=255)                   aTGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAatat                                                                                                                          >  4:47093/1‑149 (MQ=255)                       ggagATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACg                                                                                                                                    >  1:176141/1‑135 (MQ=255)                       ggagATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACg                                                                                                                                    <  2:176141/135‑1 (MQ=255)                             aaGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTta                                                                                                                       <  7:125222/142‑1 (MQ=255)                             aaGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTta                                                                                                                       >  8:125222/1‑142 (MQ=255)                                            gACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAAc                                                                                                  <  8:53797/148‑1 (MQ=255)                                            gACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAAc                                                                                                  >  1:5608/1‑148 (MQ=255)                                                 atCGCGCAGCCCAATCCGTGCCGTTTGCCCCCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACAcg                                                                                            >  2:25850/1‑149 (MQ=255)                                                    gcgcAGCCTAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACAcgcg                                                                                          >  8:126981/1‑148 (MQ=255)                                                    gcgcAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACAcg                                                                                            >  7:143709/1‑146 (MQ=255)                                                    gcgcAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACAcg                                                                                            <  8:143709/146‑1 (MQ=255)                                                        aGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACg                                                                                                                                    <  2:80891/102‑1 (MQ=255)                                                        aGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACg                                                                                                                                    >  1:80891/1‑102 (MQ=255)                                                           ctaaTCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCggtg                                                                                  <  7:126981/147‑1 (MQ=255)                                                            ccaccgcttcgcgtgtggttaaatcgataatttgcgtataaatatttttgccgtcgatttcgaCAACGCCCTGGAGCCGGGCGTTGTCGAAATc                                                                                                                                        <  4:89861‑M1/31‑1 (MQ=255)                                                            ccaccgcttcgcgtgtggttaaatcgataatttgcgtataaatatttttgccgtcgatttcgaCAACGCCCTGGAGCCGGGCGTTGTCGAAATc                                                                                                                                        >  3:89861‑M1/64‑94 (MQ=255)                                                            cAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCggtgg                                                                                 <  2:131318/149‑1 (MQ=255)                                                                  gTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAata                                                                                                                           >  6:84829/1‑101 (MQ=255)                                                                  gTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAata                                                                                                                           <  5:84829/101‑1 (MQ=255)                                                                  gTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAAcc                                                                           >  2:93243/1‑149 (MQ=255)                                                                      cGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGa                                                                                                        >  8:34526/1‑116 (MQ=255)                                                                      cGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGa                                                                                                        <  7:34526/116‑1 (MQ=255)                                                                           gCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAAt                                                                                                                                         <  5:115456/78‑1 (MQ=255)                                                                           gCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAAt                                                                                                                                         >  6:115456/1‑78 (MQ=255)                                                                            ggttaaatcgataatttgcgtataaatatttttgccgtcgatttcgaCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGAc                                                                                                                                     <  4:60878‑M1/34‑1 (MQ=255)                                                                            ggttaaatcgataatttgcgtataaatatttttgccgtcgatttcgaCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGAc                                                                                                                                     >  3:60878‑M1/48‑81 (MQ=255)                                                                             ccgccgCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTg                                                                >  2:36017/1‑149 (MQ=255)                                                                                            aGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCg                                                                      >  6:151106/1‑128 (MQ=255)                                                                                            aGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCg                                                                      <  5:151106/128‑1 (MQ=255)                                                                                            aGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATc                                                 <  3:47093/149‑1 (MQ=255)                                                                                                gcTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGata                                             >  3:101946/1‑149 (MQ=255)                                                                                                 cTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGc                                                                                      >  7:1370/1‑107 (MQ=255)                                                                                                 cTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGc                                                                                      <  8:1370/107‑1 (MQ=255)                                                                                                  tCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGata                                             >  6:46070/1‑147 (MQ=255)                                                                                                  tCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGata                                             <  5:46070/147‑1 (MQ=255)                                                                                                       tttCTGCGCGCTACCGATTTCAACGCCCTGGAGCAGGGCGTTGTCGAAATAGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGtt                                      >  3:149495/1‑149 (MQ=255)                                                                                                         tCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTc                                    >  5:113206/1‑149 (MQ=255)                                                                                                                gtcgatttcgacaacgcccggctccagggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAAcc                                                                                                 <  4:60878‑M2/47‑1 (MQ=255)                                                                                                                gtcgatttcgacaacgcccggctccagggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAAcc                                                                                                 >  3:60878‑M2/35‑81 (MQ=255)                                                                                                                  tACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCAtcgt                                                          >  4:80894/1‑118 (MQ=255)                                                                                                                  tACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCAtcgt                                                          <  3:80894/118‑1 (MQ=255)                                                                                                                  tACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTggg                           >  7:24583/1‑149 (MQ=255)                                                                                                                   gatttcgacaacgcccggctccagggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCggtgg                                                                                 <  4:89861‑M2/63‑1 (MQ=255)                                                                                                                   gatttcgacaacgcccggctccagggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCggtgg                                                                                 >  3:89861‑M2/32‑94 (MQ=255)                                                                                                                    ccGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATAc                                                                                                                    >  1:165559/1‑58 (MQ=255)                                                                                                                    ccGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATAc                                                                                                                    <  2:165559/58‑1 (MQ=255)                                                                                                                     cGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTg                             <  1:66602/144‑1 (MQ=255)                                                                                                                     cGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTg                             >  2:66602/1‑144 (MQ=255)                                                                                                                        tttCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAag                     <  1:25850/149‑1 (MQ=255)                                                                                                                         gacaacgcccggctccagggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAAATATCGATTTAACCACACGCGCAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGAGATTCAGTTTCTGGCGGGGGGCGaa                      >  7:67928‑M2/26‑147 (MQ=255)                                                                                                                            AACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGa                                                                    >  6:183263‑M1/1‑98 (MQ=255)                                                                                                                            AACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGa                                                                    <  5:183263‑M1/98‑1 (MQ=255)                                                                                                                            AACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAgaga                  <  5:168444‑M1/148‑1 (MQ=255)                                                                                                                             ACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGaa                                                                   <  4:146749‑M1/98‑1 (MQ=255)                                                                                                                             ACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGaa                                                                   >  3:146749‑M1/1‑98 (MQ=255)                                                                                                                               GCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAAt              <  1:90574‑M1/149‑1 (MQ=255)                                                                                                                                 CCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCg            <  2:184828‑M1/149‑1 (MQ=255)                                                                                                                                    ccggctccagggcgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCa         >  6:131134‑M2/15‑149 (MQ=255)                                                                                                                                     gAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCAt        <  6:168444/149‑1 (MQ=255)                                                                                                                                           ggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTAt  <  2:90574‑M2/142‑1 (MQ=255)                                                                                                                                           ggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTAt  <  7:163316‑M2/142‑1 (MQ=255)                                                                                                                                           ggcgttgTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTAt  >  8:163316‑M2/8‑149 (MQ=255)                                                                                                                                                 gTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGt                                                      <  4:90535‑M2/90‑1 (MQ=255)                                                                                                                                                 gTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGt                                                      >  3:90535‑M2/2‑91 (MQ=255)                                                                                                                                                  |                                                                                                                                              GGCCAAAATCCAGGCGTTATGAGGAGATAAGTCATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTAT  >  NC_000913/3743710‑3743996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.