| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1759424 = | 30 (0.940) | 6 (0.200) | 5/242 | 2.9 | 17.6% | coding (1100/1221 nt) | sufS | cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP‑dependent |
| ? | NC_000913 | 1759462 = | 28 (0.930) | coding (1062/1221 nt) | sufS | cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP‑dependent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGCAATAAAGCCATAGTGCCTCCCTGTTATCCCAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTGAGATCCGG > NC_000913/1759276‑1759563 | cGGCAATAAAGCCATAGTGCCTCCCTGTTATCCCAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGCTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATg > 6:81668/1‑149 (MQ=255) acagaatctgatgcattatgcgctatcacagctggaatctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCa < 6:100202‑M1/4‑1 (MQ=255) acagaatctgatgcattatgcgctatcacagctggaatctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCa < 4:78787‑M1/4‑1 (MQ=255) cagaatctgatgcattatgcgctatcacagctggaatctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCAt > 1:22401‑M1/145‑149 (MQ=255) aaaGCCATAGTGCCTCCCTGTTATCCCAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTgc > 3:116146/1‑149 (MQ=255) gatgcattatgcgctatcacagctggaatctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGt < 3:73841‑M1/13‑1 (MQ=255) gatgcattatgcgctatcacagctggaatctgtaccggatatcactctctatgtcccacaaaacaggcttggagttattgattttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGt < 5:106470‑M1/13‑1 (MQ=255) gCCTCCCTGTTATCCCAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTc < 4:116146/149‑1 (MQ=255) cAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGc > 4:3/1‑147 (MQ=255) cAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGc > 3:54982/1‑149 (MQ=255) aatctgtaccggatctcactctctatggcccacaaaacaggctttgcgttattgcttttaatctcgggaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGTGATGTCCGGTACTCACAGCAATGCCg > 6:106470‑M1/111‑149 (MQ=255) tctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGcc > 2:133888‑M1/109‑146 (MQ=255) tctgtaccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGcc < 1:133888‑M1/38‑1 (MQ=255) ggTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCATaa < 3:3/149‑1 (MQ=255) ccggatctcactctctatggcccacaaaacaggcttggcgttattgcttttaatctcggtaaacaccacgcctatgatgttggcagttttctcgataattacGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATc > 4:73841‑M1/103‑149 (MQ=255) aTACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGCTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATc < 5:81668/149‑1 (MQ=255) aGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAAcatca > 7:16765/1‑147 (MQ=255) gggAGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGAATTGCGCAGTGATGTCCGGTACGCACAGAAATGCAGTAATTATCGAGAAAAATGCCAACATCATATGCGTGGTGTTTAcc > 8:24660/1‑145 (MQ=255) ttATACATGGCCAGCGACGCGCGACACTTCGCAGGGACGTTGTAATAGGATATCAATGGCATTTCGCAGTTATGTCCGGTACGCACAGCAATGGCGTAATTATCGAGAAAACTTCCAACATCATAGGCGTTGTGTTTACCGAGATTaa < 7:24660/148‑1 (MQ=255) aCATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGc > 7:6398/1‑148 (MQ=255) cATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTTCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCaa > 5:54744/1‑149 (MQ=255) cATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCaa < 8:16765/149‑1 (MQ=255) ggCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATa < 6:106467/117‑1 (MQ=255) ccAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCa < 7:95441/107‑1 (MQ=255) ccAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCa > 8:95441/1‑107 (MQ=255) ccAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACg > 3:84256/1‑149 (MQ=255) cAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGc > 2:61903/1‑149 (MQ=255) cccGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTTCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTg < 6:54744/149‑1 (MQ=255) ccGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGt > 1:74661/1‑149 (MQ=255) cAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCa > 5:44321/1‑149 (MQ=255) aGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCa > 5:100202/1‑148 (MQ=255) gTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATagagag > 7:85182/1‑149 (MQ=255) tAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGt > 3:78787/1‑146 (MQ=255) tAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTgag < 1:61903/149‑1 (MQ=255) aaTAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAg > 2:35472/1‑108 (MQ=255) aaTAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAg < 1:35472/108‑1 (MQ=255) gCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTGAGATCCgg < 6:44321/149‑1 (MQ=255) gCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTGAGATCCgg < 2:74661/149‑1 (MQ=255) gCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTGAGATCCgg < 8:6398/149‑1 (MQ=255) | CGGCAATAAAGCCATAGTGCCTCCCTGTTATCCCAGCAAACGGTGAATACGTTGCAGGCCGGTCACCAGACGATCCACTTCTTCATGGGTGTTATACATGGCCAGCGACGCCCGACACATCGCAGGGACGTTGTAATAGGCCATCAATGGCATTGCGCAGTGATGTCCGGTACGCACAGCAATGCCGTAATTATCGAGAAAACTGCCAACATCATAGGCGTGGTGTTTACCGAGATTAAAAGCAATAACGCCAAGCCTGTTTTGTGGGCCATAGAGAGTGAGATCCGG > NC_000913/1759276‑1759563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |