New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1411899 =111 (1.100)15 (0.190) 13/204 NT 15.6% coding (50/936 nt) ttcA tRNA s(2)C32 thioltransferase, iron sulfur cluster protein
?NC_000913 = 1434958 74 (0.920)pseudogene (51/51 nt) ttcC pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related

Only 100 of 146 total aligned reads displayed.

AAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGT  >  NC_000913/1434812‑1435104
                                                                                                                                                  |                                                                                                                                                  
 aaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACtt                                                                                                                                                  >  1:447787‑M2/1‑146 (MQ=255)
  aTGGGGCAAACCGCTGCAAAAGCGGCAAAAAAGTGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttg                                                                                                                                                 >  6:101262‑M2/1‑145 (MQ=255)
   tGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgt                                                                                                                                                >  7:366273‑M2/1‑144 (MQ=255)
     gggCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTCGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgtt                                                                                                                                               >  4:225618‑M2/1‑142 (MQ=255)
       gCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcag                                                                                                                                            >  8:133888‑M2/1‑140 (MQ=255)
         aaaaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggt                                                                                                                                          <  1:89596‑M2/148‑11 (MQ=255)
          aaaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGAAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggtt                                                                                                                                         <  8:433738‑M2/148‑12 (MQ=255)
           aaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttg                                                                                                                                        <  3:86203‑M2/148‑13 (MQ=255)
            ccgCTGCAAAATGGGCAAAAAAGGGTCAAAAAAAGATTGGATTATCTTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcagggtgt                                                                                                                                       >  3:7286‑M2/2‑135 (MQ=255)
            aCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgt                                                                                                                                       >  5:153100‑M2/1‑135 (MQ=255)
            aCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgt                                                                                                                                       >  2:89596‑M2/1‑135 (MQ=255)
            aCGCTGCAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                      >  1:164568‑M2/1‑134 (MQ=255)
            aCGCTACAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgt                                                                                                                                       >  5:389828‑M2/1‑135 (MQ=255)
             cGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                      >  4:304526‑M2/1‑134 (MQ=255)
             cGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                      >  2:85774‑M2/1‑134 (MQ=255)
              gCTGCAAAAGGGGCAAAAAAGCGGCAATACAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGTTATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcagggtgtat                                                                                                                                     >  6:280940‑M2/1‑133 (MQ=255)
                  cAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgtt                                                                                                                                 <  1:256604‑M2/148‑20 (MQ=255)
                   aaaaggggcaaaaaaggggcaaAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttc                                                                                                                                >  5:84897‑M2/1‑128 (MQ=255)
                   aaaaggggcaaaaaaggggcaaAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttc                                                                                                                                >  7:387941‑M2/1‑128 (MQ=255)
                    aaaggggcaaaaaaggggcaaaAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttc                                                                                                                                              >  6:435404‑M2/1‑127 (MQ=255)
                      aggggcaaaaaaggggcaaaaaAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttcttt                                                                                                                             >  1:132039‑M2/1‑125 (MQ=255)
                          gcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctt                                                                                                                          >  5:382428‑M2/1‑121 (MQ=255)
                             aaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTa                                                                                                                      <  1:303051/148‑1 (MQ=255)
                              aaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttcttt                                                                                                                             <  8:476792‑M2/140‑24 (MQ=255)
                              aaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                      >  7:466365‑M2/1‑117 (MQ=255)
                              aaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                      <  8:466365‑M2/131‑15 (MQ=255)
                              aaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACt                                                                                                                                                   <  5:349223‑M2/118‑2 (MQ=255)
                               aaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAAt                                                                                                                    >  3:22275/1‑148 (MQ=255)
                                        aaaaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAtt                                                                                                           >  2:131510/1‑148 (MQ=255)
                                        aaaaaaGAGTGGATTATCGTAGATTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAATTTACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAtt                                                                                                           <  5:157411/148‑1 (MQ=255)
                                        aaaaaaGAGTATATTAACGTAGATAAATGTTGAAACAGATGATATTTAACACAATGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTGGTGATGTTAGCCCTTACTTCTTCACGTTGTATTCTTCTATCTTACTAATTTCTTGAtt                                                                                                           >  4:363420/1‑148 (MQ=255)
                                         aaaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgtt                                                                                                                                               <  3:425565‑M2/111‑6 (MQ=255)
                                          aaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAtttt                                                                                                         >  2:188355/1‑148 (MQ=255)
                                                  ggATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACAtt                                                                                                 >  1:355312/1‑148 (MQ=255)
                                                   gATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACAtt                                                                                                 <  4:109631/147‑1 (MQ=255)
                                                    aTTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattat                                                                                               <  8:206613‑M2/148‑54 (MQ=255)
                                                    aTTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTa                                                                                               <  1:131510/148‑1 (MQ=255)
                                                      tATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTaa                                                                                              >  1:412612/1‑147 (MQ=255)
                                                       aTCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattattt                                                                                             <  7:176054‑M2/147‑56 (MQ=255)
                                                         cGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGc                                                                                          >  6:20951/1‑148 (MQ=255)
                                                           tAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGa                                                                                        >  7:427638/1‑148 (MQ=255)
                                                            aGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGAc                                                                                       >  1:345844/1‑148 (MQ=255)
                                                             gCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGAc                                                                                       <  6:264395/147‑1 (MQ=255)
                                                               ttATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctct                                                                                    <  7:94619‑M2/148‑65 (MQ=255)
                                                                     ttgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCg                                                                               <  2:345844/147‑1 (MQ=255)
                                                                     ttgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGt                                                                              >  6:236620/1‑148 (MQ=255)
                                                                     ttgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGGCAGAGAGTTGTGATTTTTGCCTTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAAATCGt                                                                              <  4:429666/148‑1 (MQ=255)
                                                                       gtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTta                                                                            >  4:110994/1‑148 (MQ=255)
                                                                        tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaa                                                                            >  8:176054‑M2/1‑75 (MQ=255)
                                                                        tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                                                           <  1:188355/148‑1 (MQ=255)
                                                                        tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                                                           <  7:433738/148‑1 (MQ=255)
                                                                        tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATAATTATGAGTCAGATAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                                                           <  3:282361/148‑1 (MQ=255)
                                                                           cTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATg                                                                        <  8:83545/148‑1 (MQ=255)
                                                                           cTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATg                                                                        <  1:142667/148‑1 (MQ=255)
                                                                              atgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                                                     >  7:329851/1‑148 (MQ=255)
                                                                              atgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                                                     <  5:20951/148‑1 (MQ=255)
                                                                               tgatATTTAACCAATTGAAAAATAAGTAAAATACTTAGGAGTCAGAGAGTTGTGATTTTTGCGCTTACTAGTTCAGGTAGAATTGTTCTTTCTTACTAATTTCTTGATTATGCTACATATAAAATCGACTCAATTCGATATATGGCa                                                                     >  6:397127/1‑147 (MQ=255)
                                                                                 atatTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCg                                                                                                      >  5:359863/1‑112 (MQ=255)
                                                                                 atatTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCg                                                                                                      <  6:359863/112‑1 (MQ=255)
                                                                                  tatTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCAt                                                                    >  8:389466/1‑145 (MQ=255)
                                                                                    tttAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaatt                                                                >  7:49635‑M2/1‑63 (MQ=255)
                                                                                      tAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                                                 >  1:33856/1‑144 (MQ=255)
                                                                                        acacATTTAAAAAAAAGTAAAATAATTATTATTCAGAGTTTTGTTATTTTTTCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGt                                                           <  3:422556/148‑1 (MQ=255)
                                                                                         cacaTTGAAAAATAAGTAAAATACTTATGAGTCAGAGCGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTGTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGGCTCAATTCGTTATATGGCATCAGATGAGTa                                                          >  3:349925/1‑148 (MQ=255)
                                                                                             ttGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACAtt                                                                                                 <  2:312543/105‑1 (MQ=255)
                                                                                             ttGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                             >  7:341953/1‑125 (MQ=255)
                                                                                             ttGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                             <  8:341953/125‑1 (MQ=255)
                                                                                              tGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGt                                                     >  8:355430/1‑147 (MQ=255)
                                                                                                aaaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    <  4:86203/147‑1 (MQ=255)
                                                                                                aaaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    <  2:40926/147‑1 (MQ=255)
                                                                                                aaaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCCACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    <  2:355312/147‑1 (MQ=255)
                                                                                                aaaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGGTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    <  6:67786/147‑1 (MQ=255)
                                                                                                       aGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGa                                            <  5:236620/148‑1 (MQ=255)
                                                                                                       aGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTAACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCACTTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGa                                            <  1:384633/148‑1 (MQ=255)
                                                                                                             agaCTTATGAGTCAGAGAGTTCTGATTTTTGCCCTTACTTGTTCAGTATGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCTTCAGAAGAGTATGCGTCATGCCGGAACGccc                                      >  8:92418/3‑148 (MQ=255)
                                                                                                                cTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCATGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAATAGTATGCGTCATGCCGGAACGCCCAGc                                   <  7:465671/148‑1 (MQ=255)
                                                                                                                  tATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCa                                  >  6:13395/1‑147 (MQ=255)
                                                                                                                    tGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCa                                  <  5:52529/145‑1 (MQ=255)
                                                                                                                        tCAGAGAGTTGTGATTTTTGCCCTTACTTGTTTAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGaa                            <  6:14141/147‑1 (MQ=255)
                                                                                                                          agagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAACGCGACTCAATTCGTTATATGGCATCAGAAGAGTAAGCGTCATGCCGGAACGCCCAGCATAAGAAAt                          <  5:277849/147‑1 (MQ=255)
                                                                                                                           gagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGTGTCATGCCGGAACGCCCAGCATAAGAAATCt                        >  7:324364/1‑148 (MQ=255)
                                                                                                                           gagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCt                        >  6:383200/1‑148 (MQ=255)
                                                                                                                            agagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTATTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCt                        >  3:72910/1‑147 (MQ=255)
                                                                                                                             gagTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatg                      <  2:311508‑M2/148‑127 (MQ=255)
                                                                                                                             gagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATATGAAATCTGa                      >  3:406441/1‑148 (MQ=255)
                                                                                                                                   tgATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaa                                                                            <  3:164655‑M2/88‑73 (MQ=255)
                                                                                                                                   tgATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaa                                                                            >  4:164655‑M2/1‑16 (MQ=255)
                                                                                                                                   tgATTTTTGCCCTTACTTGTTCAGGATGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAACCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaa                 <  5:233267/147‑1 (MQ=255)
                                                                                                                                     aTTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaaaa               >  1:307968/1‑147 (MQ=255)
                                                                                                                                           gCCCTTACTTGTTCAGGTTGTTTTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGATGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACtgt         <  1:338271/147‑1 (MQ=255)
                                                                                                                                              cTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgtt     >  7:206613‑M2/1‑5 (MQ=255)
                                                                                                                                              cTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCg     <  7:389466/148‑1 (MQ=255)
                                                                                                                                              cTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCg     >  2:286051/1‑148 (MQ=255)
                                                                                                                                                tACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgtg   >  2:25882/1‑148 (MQ=255)
                                                                                                                                                tACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGAATAAGAAATCTGATATAAAAAACTGTGGCgt  >  3:294560/1‑147 (MQ=255)
                                                                                                                                                 aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    >  5:269676/1‑98 (MQ=255)
                                                                                                                                                 aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                                                    <  6:269676/98‑1 (MQ=255)
                                                                                                                                                 aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc                                   >  1:253387/1‑115 (MQ=255)
                                                                                                                                                 aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc                                   <  2:253387/115‑1 (MQ=255)
                                                                                                                                                 aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgtg   >  6:318783/1‑147 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
AAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGT  >  NC_000913/1434812‑1435104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.