New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3735289 =127 (1.480)4 (0.050) 4/268 6.8 3.2% coding (311/1179 nt) xylR xylose divergent operon transcriptional activator
?NC_000913 3735310 = 121 (1.480)coding (332/1179 nt) xylR xylose divergent operon transcriptional activator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 128 total aligned reads displayed.

CCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTT  >  NC_000913/3735163‑3735457
                                                                                                                                                   |                                                                                                                                                    
ccGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCAttt                                                                                                                                                     >  7:288091/1‑149 (MQ=255)
 cGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCAtttt                                                                                                                                                    >  4:266098/1‑149 (MQ=255)
  gACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCAttttt                                                                                                                                                   <  8:288091/149‑1 (MQ=255)
  gACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCAttttt                                                                                                                                                   <  8:243240/149‑1 (MQ=255)
    cTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGc                                                                                                                                                 <  3:216145/149‑1 (MQ=255)
    cTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGc                                                                                                                                                 <  8:240068/149‑1 (MQ=255)
     ttCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCCCCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCa                                                                                                                                                >  2:359981/1‑149 (MQ=255)
     ttCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCa                                                                                                                                                <  7:258242/149‑1 (MQ=255)
       cgacgaCAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCa                                                                                                                                                <  7:262920/147‑1 (MQ=255)
        gacgacAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCAtt                                                                                                                                              <  1:153674/148‑1 (MQ=255)
                aCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAagag                                                                                                                                      >  1:45280/1‑148 (MQ=255)
                aCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAagag                                                                                                                                      >  2:211974/1‑148 (MQ=255)
                aCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACACACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAagag                                                                                                                                      >  8:58693/1‑148 (MQ=255)
                   gATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAg                                                                                                                                  <  8:261835/149‑1 (MQ=255)
                       gAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAAGTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCg                                                                                                                               <  5:99869/148‑1 (MQ=255)
                        aGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGaaa                                                                                                                                   <  3:321209/143‑1 (MQ=255)
                        aGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGtt                                                                                                                             <  4:45385/149‑1 (MQ=255)
                          ctaGCGCTGGCTGATGTCGAGGTCACGATTGTTTGGGTTTGCTGCTCTTATCACCTTTCAGATAGTTACCATCCCGTTCTTTACATTGCCACCGATAACTATTCGCTGGTTGAAAGCGCATTTTTGCATTTATAAGATATATGCGTTaa                                                                                                                           <  4:215980/147‑1 (MQ=255)
                           aaGCGCTGGCTGATATCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAAc                                                                                                                          >  1:262521/1‑149 (MQ=255)
                            aGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCCCCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCTTTTTTGCATTTAAAAGAGAAAGGCGTTAAcc                                                                                                                         >  1:155460/1‑149 (MQ=255)
                             gcgcTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCg                                                                                                                        >  7:138272/1‑149 (MQ=255)
                               gctggctgATGTAGACGTCCCCATTGTTTGGGTGGGCGGCTCGTATCACCTTGCAGAAAGTTACACACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgct                                                                                                                      <  1:170774/149‑1 (MQ=255)
                                ctggctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGACACCGATAACTATTCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctt                                                                                                                     >  2:237687/1‑149 (MQ=255)
                                 tggctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgcttt                                                                                                                    >  7:68671/1‑149 (MQ=255)
                                   gctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgc                                                                                                                  <  7:334075/149‑1 (MQ=255)
                                   gctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgc                                                                                                                  >  8:334075/1‑149 (MQ=255)
                                       aTGTCGACGTCCCCATTGTTGGGGTTGGCGTCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgcttt                                                                                                               <  7:58693/148‑1 (MQ=255)
                                       aTGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCtttt                                                                                                              >  8:124907/1‑149 (MQ=255)
                                        tGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCttttt                                                                                                             <  6:140452/149‑1 (MQ=255)
                                          tCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                                         >  2:341279/1‑119 (MQ=255)
                                          tCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                                         <  1:341279/119‑1 (MQ=255)
                                          tCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTa                                                                                                            <  8:68671/148‑1 (MQ=255)
                                          tCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTa                                                                                                            <  4:100866/148‑1 (MQ=255)
                                            gACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                                         <  6:24915/117‑1 (MQ=255)
                                            gACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                                         >  5:24915/1‑117 (MQ=255)
                                            gACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                                          <  4:329604/148‑1 (MQ=255)
                                            gACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                                          <  2:331030/148‑1 (MQ=255)
                                                  cccATTGTTGCGGTTGGCGGCTCGTCTCACCTTGCAGAAAGTTACCCACCCGCTCATAACATAGCCACCGAGAAGTATTAGCTGGTTGAAAGCGCCTTTTTGCATTTAACAGAGAACGGCGTTAACCGCTTTGCTTTTTATGGTCTTca                                                                                                   <  3:182079/149‑2 (MQ=255)
                                                   ccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGATAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCg                                                                                                  >  2:179242/1‑149 (MQ=255)
                                                     aTTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGa                                                                                                <  8:133884/149‑1 (MQ=255)
                                                      ttgttgGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGaa                                                                                               <  1:359981/149‑1 (MQ=255)
                                                        gttgGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTAACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAAt                                                                                              <  8:187755/148‑1 (MQ=255)
                                                           ggggTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACACGTTCATTACATTGCCACCGATTACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAg                                                                                          >  5:333716/1‑149 (MQ=255)
                                                            gggTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAg                                                                                          <  3:343372/148‑1 (MQ=255)
                                                            gggTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGc                                                                                         >  3:343919/1‑149 (MQ=255)
                                                                  gcggcTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCaaa                                                                                   >  5:2178/1‑149 (MQ=255)
                                                                    ggcTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACg                                                                                 >  6:305642/1‑149 (MQ=255)
                                                                      cTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACAGAGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGtt                                                                               <  2:155460/149‑1 (MQ=255)
                                                                         gTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgctt                                                                                                                >  1:18857/1‑113 (MQ=255)
                                                                         gTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgctt                                                                                                                <  2:18857/113‑1 (MQ=255)
                                                                         gTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTg                                                                              <  1:211974/147‑1 (MQ=255)
                                                                         gTATCACATTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATTCGCTGGTTGAAAGCGCATTTTTGCATTAAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTgg                                                                             <  6:302021/148‑1 (MQ=255)
                                                                            tCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGc                                                                           <  2:249315/147‑1 (MQ=255)
                                                                            tCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGc                                                                           >  1:249315/1‑147 (MQ=255)
                                                                               ccTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGaa                                                                                               >  4:183519/1‑124 (MQ=255)
                                                                                cTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTGGTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACt                                                                       >  8:254331/1‑147 (MQ=255)
                                                                                 ttGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAACCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg                                                                    >  2:84146/1‑149 (MQ=255)
                                                                                    cttaaaGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGATAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg‑cgc                                                                <  6:333716/146‑1 (MQ=255)
                                                                                     aGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg‑cgc                                                                >  3:309739/1‑148 (MQ=255)
                                                                                             acccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACTTTGGGCCACTGAG‑CGCGAATATGCa                                                       >  8:77443/1‑149 (MQ=255)
                                                                                              cccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCTCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCa                                                       <  6:102060/148‑1 (MQ=255)
                                                                                              cccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAt                                                      <  3:182047/149‑1 (MQ=255)
                                                                                               ccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCAttt                                                                                                                                             >  5:174072/1‑62 (MQ=255)
                                                                                               ccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg‑c                                                                  <  3:141083/136‑1 (MQ=255)
                                                                                               ccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg‑c                                                                  >  4:141083/1‑136 (MQ=255)
                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTc                                                   <  7:77443/149‑1 (MQ=255)
                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAGTTc                                                   >  6:16460/1‑149 (MQ=255)
                                                                                                  cccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCg                                                  >  4:245194/1‑149 (MQ=255)
                                                                                                          ttACATTGCCACCGATAACTATGCGCTGGTTGCAAGCGCAGTTTTGCATTTAACAGAGGAAGGCGTTGACCGCTGTGCTTTTTATGGTCTTACGGAATCAAGCGGCACACGTTGGGCCACTGAG‑CGCGAAGATGCATTTCGTAAGcggg                                          >  8:331474/1‑146 (MQ=255)
                                                                                                          ttACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTg                                          >  8:10575/1‑149 (MQ=255)
                                                                                                           tACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTcc                                                                                                   <  4:10725/92‑1 (MQ=255)
                                                                                                            aCATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGt                                         <  7:9499/148‑1 (MQ=255)
                                                                                                                   cACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCg                                    >  4:330975/1‑146 (MQ=255)
                                                                                                                    aCCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAt                                                      >  6:189264/1‑127 (MQ=255)
                                                                                                                    aCCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAt                                                      >  6:184602/1‑127 (MQ=255)
                                                                                                                    aCCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAt                                                      <  5:189264/127‑1 (MQ=255)
                                                                                                                    aCCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCAt                                                      <  5:184602/127‑1 (MQ=255)
                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCgaagaa                               >  4:280643/1‑147 (MQ=255)
                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGaaaa                             <  3:104915/149‑1 (MQ=255)
                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGaaaa                             <  4:309739/149‑1 (MQ=255)
                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCAGTTAAAAGATAAAGGCGTTAACCGCTTTGCTGTTTATGGTCTTCCGGCAGCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGaaaa                             <  7:254331/149‑1 (MQ=255)
                                                                                                                           cattggcgcTGGTTGAAAGCGCATTTTTGCTTTTAAATGCGAACGGGGTT‑ACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATc                        <  3:190989/144‑1 (MQ=255)
                                                                                                                               tGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCTGAAGAAAAGTATcgcg                     <  3:245194/149‑1 (MQ=255)
                                                                                                                               tGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATcgcg                     <  8:138272/149‑1 (MQ=255)
                                                                                                                               tGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATcgc                      <  7:368358/148‑1 (MQ=255)
                                                                                                                                gcgcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGa                                                              <  2:298689/107‑1 (MQ=255)
                                                                                                                                gcgcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGa                                                              >  1:298689/1‑107 (MQ=255)
                                                                                                                                 cgcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGa                   <  7:205190/149‑1 (MQ=255)
                                                                                                                                  gcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTTTGGTGTGCCGGATTCAGCGGGCAAACTTTGGGCC‑CTGGGCCGCGATTATGCATTTCTCCTCATTTTCCCGTAAGAAAATTATGGCGGAg                  >  3:329981/1‑149 (MQ=255)
                                                                                                                                   cTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATAAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGt                 <  2:45280/149‑1 (MQ=255)
                                                                                                                                     ggTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTgg               <  2:202775/149‑1 (MQ=255)
                                                                                                                                      gTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGt              <  7:21997/149‑1 (MQ=255)
                                                                                                                                      gTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGt              <  4:343919/149‑1 (MQ=255)
                                                                                                                                          aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTAt          >  3:342635/1‑149 (MQ=255)
                                                                                                                                          aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTAt          >  4:21711/1‑149 (MQ=255)
                                                                                                                                          aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTGTATGGTCTTCCGGAATACAGCGGCAAACGTTGTGCCACTGAG‑CGCGAATATGCATTTCGGCCGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTa           <  2:262521/148‑1 (MQ=255)
                                                                                                                                              cgcATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAgg      <  5:305642/149‑1 (MQ=255)
                                                                                                                                               gcATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCAACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAggg     >  6:187058/1‑149 (MQ=255)
                                                                                                                                               gcATTTTTACATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAg                                                                                          <  3:249246/65‑1 (MQ=255)
                                                                                                                                                  tttttGCATTTAAAAGAGAAAGGCGTTACCCGCTTTGCTTTTTAAGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGt   >  3:272851/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAG‑CGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTT  >  NC_000913/3735163‑3735457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.