New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2432896 | 38 (0.980) | 6 (0.160) | 6/246 | 3.9 | 13.6% | coding (47/1269 nt) | folC | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase |
? | NC_000913 | = 2432915 | 40 (1.070) | coding (28/1269 nt) | folC | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ACAAATGGCGCTGGTTTCAGGACGCCAAGACGCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2432791‑2432896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCT < NC_000913/2432915‑2432884 ACAAATGGCGCTGGTTTCAGGACGCCAAGACGCTCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGG > 8:49196/1‑127 ACAAATGGCGCTGGTTTCAGGACGCCAAGACGCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGG < 7:49196/127‑1 CTGGTTTCAGGACGCCAAGACGCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATC < 7:76885/127‑1 CTGGTTTCAGGACGCCAAGACGCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATC > 8:76885/1‑127 GCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCT > 1:13620/1‑107 GCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCT < 2:13620/107‑1 ACAAATGGCGCTGGTTTCAGGACGCCAAGACGCGCCGCGACCAGGCTCACGCGCTCAAGGCCGAGATCGATAGTTTTACTGTGCAGGTTTTCCAGATAAGAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2432791‑2432896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCT < NC_000913/2432915‑2432884 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |