New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3372652	104 (1.090)	4 (0.040)	4/264	8.4	4.3%	intergenic (‑78/+31)	nanT/nanA	sialic acid transporter/N‑acetylneuraminate lyase
	?	NC_000913	= 3372669	81 (0.910)					intergenic (‑95/+14)	nanT/nanA	sialic acid transporter/N‑acetylneuraminate lyase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGGCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3372498‑3372652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcccctcGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTGCAC  <  NC_000913/3372669‑3372523                                                                                                                                                                                                                                                                                                                CAGGCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTT                                                                                                                                                           <  2:122778/149‑1  AGGCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATAGCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTATGGTACAGATGCGTTTATTTC                                                                                                                                                          <  8:254190/149‑1    GCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCC                                                                                                                                                        <  8:251098/149‑1    GCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCC                                                                                                                                                        <  4:1388/149‑1     CAGCGGAAAATGCGCGCGATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCC                                                                                                                                                       <  7:227545/149‑1     CAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCC                                                                                                                                                       <  6:117382/149‑1      AGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATTTTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCT                                                                                                                                                      >  8:410017/1‑149                                                      GATATTCTGGGTTGTAGTACTCATTGTGGGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAAC                                                                                                                      >  4:379776/1‑133                                                      GATATTCTGGGTTGTAGTACTCATTGTGGGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAAC                                                                                                                      <  3:379776/133‑1                                                             TGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCGCACGCGTTGGTATGAAAATTGTAGGGTACAGATGCGTGTATTTCCCC                                                                                                                                                       >  4:286694/1‑93                                                             TGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCC                                                                                                                                                       <  3:286694/93‑1                                                                            ATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAA                                                                                                                       >  5:332868/1‑110                                                                            ATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAA                                                                                                                       <  6:332868/110‑1                                                                                                                                                   TTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAAC         >  4:176960/1‑149                                                                                                                                                   TTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAAC         >  3:361411/1‑149                                                                                                                                                   TTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAAC         >  7:151936/1‑149                                                                                                                                                   TTTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAA          <  1:234082/148‑1                                                                                                                                                    TTCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGGGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACC        >  4:305501/1‑149                                                                                                                                                     TCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCA                                                        <  6:192004/100‑1                                                                                                                                                     TCCCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCA                                                        >  5:192004/1‑100                                                                                                                                                       CCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTG     <  7:268133/149‑1                                                                                                                                                       CCCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTG     <  3:112012/149‑1                                                                                                                                                        CCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTGC    <  8:151936/149‑1                                                                                                                                                        CCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTG     >  6:163742/1‑148                                                                                                                                                        CCTCGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTG     >  7:351453/1‑148                                                                                                                                                           CGCTCGCCACAACCGGGTGACGGGAAATAAACGCATCAGTACCATACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGAACTACAACCCAGAAAATCCCGTGGTATCGCCATCTCACCCGTGCAC  >  4:7971/1‑148                                                                                                                                                                                                                                                                                                                CAGGCAGCGGAAAATGCGCGCCATTGTGCACGGTTGAGATGGCGATACCACGGGATATTCTGGGTTGTAGTACTCATTGTGAGTCTCCCGCGGTGGGCGATGCCCACACGCTTTGGTATGAAAATTGTAGGGTACAGATGCGTTTATTTCCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3372498‑3372652 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcccctcGCTCGCCCCTACCGGGTGAGGGGAAATAAACGCATCTGTACCCTACAATTTTCATACCAAAGCGTGTGGGCATCGCCCACCGCGGGAGACTCACAATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTGCAC  <  NC_000913/3372669‑3372523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.