| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3688674 = | 0 (0.000) | 21 (0.650) | 18/268 | 0.9 | 56.0% | coding (500/3474 nt) | bcsC | cellulose synthase subunit |
| ? | NC_000913 | = 4506221 | 33 (1.020) | coding (935/1119 nt) | yjhC | GFO/IDH/MOCA family putative oxidoreductase. NAD(P)‑dependent | |||||
CGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGA > NC_000913/4506075‑4506367 | cGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGTAAGGCAATATGACCTCAGATATGGATTGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGat > 4:114298‑M2/1‑147 (MQ=255)cGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGaa < 7:80112/149‑1 (MQ=255) aaaGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGt > 2:3311/1‑149 (MQ=255) aaGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcg > 2:96910‑M2/1‑137 (MQ=255) aaGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcg < 1:96910‑M2/141‑5 (MQ=255) aaGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGtt < 5:60063/149‑1 (MQ=255) cATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAatat > 5:30724/1‑149 (MQ=255) aTGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCGGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATc > 3:114589/1‑149 (MQ=255) gAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttc < 2:6097‑M2/149‑31 (MQ=255) acaAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGCTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCtgtg < 3:5016/149‑1 (MQ=255) caAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTgtgg > 7:65668/1‑149 (MQ=255) gaagaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTgtggtg > 2:104756/1‑148 (MQ=255) aagaagaTGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGc > 1:54386/1‑148 (MQ=255) gatgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCtgtg > 5:92268/1‑136 (MQ=255) gatgatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCtgtg < 6:92268/136‑1 (MQ=255) gatCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactc < 7:81567‑M2/148‑51 (MQ=255) gtcgGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgacaccgtactccagtactcgacag > 3:107398‑M2/1‑94 (MQ=255) gtcgGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAagaaga < 1:104756/148‑1 (MQ=255) aaGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATAtt < 5:113551/149‑1 (MQ=255) tCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggc < 8:45975‑M2/149‑76 (MQ=255) ggAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGt < 4:114589/147‑1 (MQ=255) gAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACAACATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCAATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGt > 7:49302/1‑147 (MQ=255) aaaTGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcac < 6:7008‑M2/149‑80 (MQ=255) gatggCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgtt < 1:15764‑M2/148‑84 (MQ=255) gcTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTgtggt < 6:31400/96‑1 (MQ=255) gcTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTgtggt > 5:31400/1‑96 (MQ=255) gcTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATCGACCTTCTCAATGGTGAGGCGGCCATGTc < 2:54386/149‑1 (MQ=255) tataGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCgg > 3:95964/1‑149 (MQ=255) taGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttg > 8:81567‑M2/1‑55 (MQ=255) taGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttg > 1:6097‑M2/1‑55 (MQ=255) gCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttg > 7:45975‑M2/1‑53 (MQ=255) cATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGATTAATAAGatcgcttcgccacggcgagccgcaattttcgccaccgtactccagtactcgacagcaaagtcaccttccggcggcgcaccgttgaacagtttgttg < 1:60686‑M2/148‑97 (MQ=255) tCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATgg < 6:112037/117‑1 (MQ=255) tCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATgg > 5:112037/1‑117 (MQ=255) aGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGAtg > 2:21841/1‑149 (MQ=255) aaaaaaCACCATTATTGCTTTCCAGTTTAATAAGAAAGGAGTCGTTATTCCTCCATAATATCCTCTGTGGTGCAAAAACTGAAGAAGATTATATTGACCTTCTCAATGGTGAGTCGGCCATGTCGGCGATTGCTACTGCTGAtgctgc < 8:49302/148‑1 (MQ=255) aaaaCACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCAc > 5:54789/1‑149 (MQ=255) aaaaCACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACCTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAAt < 7:22982/105‑1 (MQ=255) aaaaCACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACATTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAAt > 8:22982/1‑105 (MQ=255) aTTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTc > 4:70806/1‑147 (MQ=255) tATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTc > 2:163588/1‑145 (MQ=255) aTGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGa < 1:21841/148‑1 (MQ=255) cTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGca < 6:54789/149‑1 (MQ=255) gCCAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcatgaccggtcgtcgcc < 3:19529‑M2/149‑136 (MQ=255) gCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGcag < 1:163588/147‑1 (MQ=255) cAGTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcatgaccggtcgtcgcctg > 2:60686‑M2/1‑12 (MQ=255) gTTTAATAAGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcatgaccggtcgtcgcctgc < 1:38519‑M2/148‑139 (MQ=255) ttAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGcaggacagga < 1:3311/148‑1 (MQ=255) aataaGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGaaa < 4:95964/148‑1 (MQ=255) aaGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcat > 1:138236‑M2/1‑3 (MQ=255) aaGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcat < 8:37422‑M2/124‑122 (MQ=255) aaGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcat > 7:37422‑M2/1‑3 (MQ=255) aaGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagcaatgtcaccttccggcggcgcaccgttgaacagtttgttgtaactcgccacagcttcttctgcat < 2:138236‑M2/124‑122 (MQ=255) aGatcgcttcgccacggcgagccggaattttcgccaccgtactccagtactcgacagaaatgtcaccttccggcggcggaccgttgaacagtttgttgtaactcgccacatcttcttctgcatgaccggtcgtcgcctgcaatcttgc > 4:19529‑M2/1‑2 (MQ=255) | CGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGA > NC_000913/4506075‑4506367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |