New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3858205	57 (1.800)	4 (0.140)	4/244	3.2	7.1%	coding (200/1494 nt)	yidJ	sulfatase/phosphatase superfamily protein
	?	NC_000913	= 3858228	53 (1.850)					coding (177/1494 nt)	yidJ	sulfatase/phosphatase superfamily protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGCTATAGCAACCGACCA  >  NC_000913/3858061‑3858352                                                                                                                                                 |                                                                                                                                                    ggACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACtatt                                                                                                                                                  >  1:23296/1‑145 (MQ=255)     acTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCg                                                                                                                                             >  1:145608/1‑149 (MQ=255)       tCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCg                                                                                                                                             >  5:104598/1‑147 (MQ=255)              tGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGGGATAGCCGGCATCCTTAAAGTAGCGCCGCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGTTCCACGTGCCGGACTGGTTAGCGTAGATACCg                                                                                                                                    <  7:49075/149‑1 (MQ=255)                ccGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg                                                                                                                                   >  4:51589/1‑148 (MQ=255)                  gAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa                                                                                                                                <  5:135724/149‑1 (MQ=255)                     aTAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATa                                                                                                                             <  6:104598/149‑1 (MQ=255)                        gTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTc                                                                                                                          <  1:146810/149‑1 (MQ=255)                                    gagaTGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAg                                                                                                              >  4:107542/1‑149 (MQ=255)                                    gagaTGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAg                                                                                                              <  3:51589/149‑1 (MQ=255)                                      gaTGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCg                                                                                                                                    >  4:55176/1‑125 (MQ=255)                                      gaTGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCg                                                                                                                                    <  3:55176/125‑1 (MQ=255)                                      gaTGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGc                                                                                                            >  7:45850/1‑149 (MQ=255)                                                 ccGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAGATAGTCCGGCCCGTGCAGGCGTACAAACCg                                                                                                  <  6:17729/148‑1 (MQ=255)                                                      gTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt                                                                                                <  4:119410/145‑1 (MQ=255)                                                      gTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt                                                                                                >  3:119410/1‑145 (MQ=255)                                                      gTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGaa                                                                                             >  1:88522/1‑148 (MQ=255)                                                       tAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACa                                                                                           <  3:107542/149‑1 (MQ=255)                                                          cAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGgt                                                                                        <  5:44803/149‑1 (MQ=255)                                                           aGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGgtg                                                                                       >  7:82603/1‑149 (MQ=255)                                                                tgATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAgg                                                                                   <  2:145608/148‑1 (MQ=255)                                                                  aTAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACTGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCg                                                                                 <  8:45850/148‑1 (MQ=255)                                                                   tAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCg                                                                                                                                    >  3:110580/1‑96 (MQ=255)                                                                   tAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCg                                                                                                                                    <  4:110580/96‑1 (MQ=255)                                                                     gCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGAGGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGTCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGTaa                                                                              <  6:60023/148‑1 (MQ=255)                                                                     gCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAAt                                                                             <  2:88522/149‑1 (MQ=255)                                                                      ccGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGgtg                                                                                       <  2:64546/138‑1 (MQ=255)                                                                      ccGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGgtg                                                                                       >  1:64546/1‑138 (MQ=255)                                                                           aTCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGc                                                                       >  2:151763/1‑149 (MQ=255)                                                                              cTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGc                                                                       <  2:18755/146‑1 (MQ=255)                                                                              cTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGc                                                                       >  1:18755/1‑146 (MQ=255)                                                                               ttAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGaa                                                                    >  6:19955/1‑148 (MQ=255)                                                                                        cgcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTccgc                                                          <  8:82603/149‑1 (MQ=255)                                                                                         gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTccgcc                                                         >  3:67192/1‑149 (MQ=255)                                                                                           cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaaa                                                                                                                               <  4:24421/77‑1 (MQ=255)                                                                                           cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaaa                                                                                                                               >  3:24421/1‑77 (MQ=255)                                                                                           cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGa                                                                     <  5:126378/135‑1 (MQ=255)                                                                                           cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGa                                                                     >  6:126378/1‑135 (MQ=255)                                                                                           cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCcgccgc                                                       >  5:120618/1‑149 (MQ=255)                                                                                             cATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATa                                                                  >  5:60632/1‑136 (MQ=255)                                                                                             cATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATa                                                                  <  6:60632/136‑1 (MQ=255)                                                                                              aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCcgccgc                                                       >  1:112635/1‑146 (MQ=255)                                                                                                    gagaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTAt                                               >  3:62548/1‑148 (MQ=255)                                                                                                     agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATc                                              >  2:1508/1‑148 (MQ=255)                                                                                                     agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCa                                             <  4:62548/149‑1 (MQ=255)                                                                                                      gaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCaa                                            >  1:123104/1‑149 (MQ=255)                                                                                                              tGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTg                                     <  6:120618/148‑1 (MQ=255)                                                                                                               gCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCg                                   >  7:5881/1‑149 (MQ=255)                                                                                                                              gttgGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGc                           >  2:43112/1‑142 (MQ=255)                                                                                                                              gttgGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGc                           <  1:43112/142‑1 (MQ=255)                                                                                                                                  gTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGc                 <  4:67192/148‑1 (MQ=255)                                                                                                                                    ccACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTCCAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGCta               >  4:1706/1‑148 (MQ=255)                                                                                                                                      aCGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCg                          >  2:118355/1‑135 (MQ=255)                                                                                                                                      aCGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCg                          <  1:118355/135‑1 (MQ=255)                                                                                                                                      aCGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGCTATAg            >  4:77456/1‑149 (MQ=255)                                                                                                                                        gggCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGc                                                                       >  1:150983/1‑88 (MQ=255)                                                                                                                                        gggCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGc                                                                       <  2:150983/88‑1 (MQ=255)                                                                                                                                                cTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGCTATAGCAACCGACCa  >  1:117876/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGAACAGGTGTAGGCGGAATTAAAGCGAATACCTTCCGCCGCCAGACTATCAATATTTTGCGTATTCAGCGGTTTACCGCTATAGCAACCGACCA  >  NC_000913/3858061‑3858352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.