New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4277035	54 (1.700)	4 (0.130)	4/254	3.3	7.6%	coding (1565/1587 nt)	yjcC	putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
	?	NC_000913	= 4277043	47 (1.580)					coding (1573/1587 nt)	yjcC	putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCGGTG  >  NC_000913/4276888‑4277180                                                                                                                                                    |                                                                                                                                                  ggTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCgg                                                                                                                                                  >  4:100091/1‑149 (MQ=255)   ttAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCgg                                                                                                                                                  >  1:132143/1‑147 (MQ=255)       aaaCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGtt                                                                                                                                             >  6:98096/1‑148 (MQ=255)       aaaCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGtt                                                                                                                                             >  6:132697/1‑148 (MQ=255)         aCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGACGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAc                                                                                                                                          <  3:64718/149‑1 (MQ=255)         aCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAc                                                                                                                                          <  5:98096/149‑1 (MQ=255)           gATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAcgc                                                                                                                                        >  7:113810/1‑149 (MQ=255)                cTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCggg                                                                                                                                   >  8:120515/1‑149 (MQ=255)                      gCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATa                                                                                                                              >  4:52189/1‑148 (MQ=255)                           gAATCTGAGGTGCAGGTTTTGTGGCTGCGCATTCGGGGCGTGCGCTTTTGCGAGGGATGGTTCTTTGCGATGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAAtt                                                                                                                         <  8:73884/148‑1 (MQ=255)                           gAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTa                                                                                                                        <  6:6559/149‑1 (MQ=255)                            aaaCTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTa                                                                                                                        >  7:79518/1‑148 (MQ=255)                                tGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGc                                                                                                                   >  7:16857/1‑149 (MQ=255)                                  aggagCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCgg                                                                                                                 <  4:60586/149‑1 (MQ=255)                                  aggagCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCg                                                                                                                  <  5:132697/148‑1 (MQ=255)                                   ggagCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGt                                                                                                                <  3:84645/149‑1 (MQ=255)                                        aGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGtt                                                                                                                                             <  3:48538/115‑1 (MQ=255)                                        aGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGa                                                                                                           <  4:82863/149‑1 (MQ=255)                                        aGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCACGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGtt                                                                                                                                             >  4:48538/1‑115 (MQ=255)                                                  gCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTgg                                                                                                 <  2:132143/149‑1 (MQ=255)                                                  gCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTg                                                                                                  <  7:120515/148‑1 (MQ=255)                                                      cgcAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGa                                                                                               <  2:108345/147‑1 (MQ=255)                                                                   tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATc                                                                                       >  7:32136/1‑142 (MQ=255)                                                                   tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATc                                                                                       <  8:32136/142‑1 (MQ=255)                                                                             ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGaaaa                                                                      <  8:16857/149‑1 (MQ=255)                                                                              cAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa                                                                             >  7:51413/1‑141 (MQ=255)                                                                              cAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa                                                                             <  8:51413/141‑1 (MQ=255)                                                                                 ggATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGa                                                                         >  6:90780/1‑142 (MQ=255)                                                                                 ggATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGa                                                                         <  5:90780/142‑1 (MQ=255)                                                                                  gATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTgg                                                                                                              >  2:22545/1‑104 (MQ=255)                                                                                  gATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTgg                                                                                                              <  1:22545/104‑1 (MQ=255)                                                                                  gATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCgg                                                                 <  8:113810/149‑1 (MQ=255)                                                                                  gATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCgg                                                                 >  1:130012/1‑149 (MQ=255)                                                                                   aTGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCgg                                                                 >  5:110751/1‑148 (MQ=255)                                                                                    tGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGga                                                               <  2:1230/149‑1 (MQ=255)                                                                                      gTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa                                                                             <  6:86492/133‑1 (MQ=255)                                                                                      gTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa                                                                             >  5:86492/1‑133 (MQ=255)                                                                                             gCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTct                                                       <  5:140377/148‑1 (MQ=255)                                                                                               gAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTctgct                                                    >  2:50724/1‑149 (MQ=255)                                                                                                     gATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGAc                                                                            <  6:46812/119‑1 (MQ=255)                                                                                                     gATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGAc                                                                            >  5:46812/1‑119 (MQ=255)                                                                                                      aTGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGAc                                             <  2:130012/149‑1 (MQ=255)                                                                                                        gccgccGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGaa                                                                        >  1:70226/1‑120 (MQ=255)                                                                                                        gccgccGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGaa                                                                        <  2:70226/120‑1 (MQ=255)                                                                                                                          gCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAg                                    >  6:84193/1‑138 (MQ=255)                                                                                                                          gCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAg                                    <  5:84193/138‑1 (MQ=255)                                                                                                                           cAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGa                         <  6:59525/148‑1 (MQ=255)                                                                                                                            aaTGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAg                                    <  2:38312/136‑1 (MQ=255)                                                                                                                            aaTGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAg                                    >  1:38312/1‑136 (MQ=255)                                                                                                                            aaTGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGata                       >  7:17639/1‑149 (MQ=255)                                                                                                                                     aGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATc              <  3:52189/149‑1 (MQ=255)                                                                                                                                        aaTTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGa           <  8:17639/149‑1 (MQ=255)                                                                                                                                                gcgcgGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCggt   >  3:93637/1‑149 (MQ=255)                                                                                                                                                 cgcgGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCggtg  <  3:100091/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCGGTG  >  NC_000913/4276888‑4277180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.