New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1213105 =24 (0.250)44 (0.460) 42/274 1.9 64.7% coding (3/405 nt) ycgX DUF1398 family protein
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 117 total aligned reads displayed.

GTGAGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACG  >  NC_000913/1212961‑1213253
                                                                                                                                                |                                                                                                                                                    
gTGAGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCa                                                                                                                                                  <  4:228007/149‑1 (MQ=255)
  accttgcagatgcgttcgagcattataacgaatggcatccgcatagtgagctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAgg                                                                                                                                                >  1:279522‑M1/143‑149 (MQ=255)
   aGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATc                                                                                                                                                   >  2:135655/1‑145 (MQ=255)
   aGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATc                                                                                                                                                   <  1:135655/145‑1 (MQ=255)
   aGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGa                                                                                                                                               <  7:235975/149‑1 (MQ=255)
    gTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtaga                                                                                                                                              <  6:194762‑M1/149‑5 (MQ=255)
     taataaTTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagcc                                                                                                                                             >  1:214937‑M1/1‑144 (MQ=255)
     taataaTTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGata                                                                                                                                             <  2:137415/149‑1 (MQ=255)
       ataatTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGataat                                                                                                                                           <  6:396820/149‑1 (MQ=255)
         agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGAtaataa                                                                                                                                         >  3:66735‑M1/136‑149 (MQ=255)
         agaggcggtcgagcattataaagaatggcatacgcagagtgcgctgggttatcgctcgccacgggaatatctggggcagcgggcttggtatgggtttagtgataacagatgtctggaaatttaggtggaaatccaCATAAGGataata                                                                                                                                          <  2:113714‑M1/13‑1 (MQ=255)
           aggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAAcc                                                                                                                                       <  7:361969‑M1/16‑1 (MQ=255)
                aTGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCtt                                                                                                                                   <  1:162180/148‑1 (MQ=255)
                aTGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTg                                                                                                                                  >  4:155606/1‑149 (MQ=255)
                  gTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaat                                                                                                                                >  4:250616‑M1/1‑131 (MQ=255)
                     aTCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAta                                                                                                                                                >  1:151522‑M1/1‑128 (MQ=255)
                     aTCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAta                                                                                                                                                <  2:151522‑M1/130‑3 (MQ=255)
                      tCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctcc                                                                                                                            <  4:288272‑M1/149‑23 (MQ=255)
                      tCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctc                                                                                                                             <  8:3194‑M1/148‑22 (MQ=255)
                      cattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGtt                                                                                                                            >  1:113714‑M1/123‑149 (MQ=255)
                           taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTtgt                                                                                                                          <  3:125267‑M1/29‑1 (MQ=255)
                                   aataaATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCg                                                                                                                 >  2:30789/1‑147 (MQ=255)
                                           taatgtGCAATACGGTGATGTTTTAATTCTGAATAAAACCATGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAta                                                                                                                                                >  8:393466‑M1/1‑106 (MQ=255)
                                           taatgtGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAta                                                                                                                                                <  7:393466‑M1/108‑3 (MQ=255)
                                           catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCAc                                                                                                       >  4:125267‑M1/102‑149 (MQ=255)
                                                tgCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCg                                                                                                  <  3:155606/149‑1 (MQ=255)
                                                 gCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcactt                                                                                                          >  5:99997‑M1/1‑100 (MQ=255)
                                                 gCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcactt                                                                                                          <  6:99997‑M1/140‑41 (MQ=255)
                                                 gCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCgg                                                                                                 >  4:94731/1‑149 (MQ=255)
                                                  cAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                                                                 <  1:27118‑M1/148‑50 (MQ=255)
                                                        ggTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                          <  2:210851‑M1/149‑57 (MQ=255)
                                                             tGTTTTAATTCTGAAAAAAACCAGGAGTAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                                                                     <  1:102818‑M1/149‑62 (MQ=255)
                                                              gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTc                                                                                     <  4:350388‑M1/66‑1 (MQ=255)
                                                               ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCaa                                                                                   <  7:181397‑M1/68‑1 (MQ=255)
                                                                tttAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                                                                    >  5:301965‑M1/1‑85 (MQ=255)
                                                                tttAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGtt                                                                                                                            <  8:414649/107‑1 (MQ=255)
                                                                tttAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGtt                                                                                                                            >  7:414649/1‑107 (MQ=255)
                                                                tttAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAAt                                                                                  >  1:35249/1‑149 (MQ=255)
                                                                tttAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACCTCAAt                                                                                  >  7:214209/1‑149 (MQ=255)
                                                                  tAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcactt                                                                                                          >  8:143457‑M1/1‑83 (MQ=255)
                                                                  tAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcactt                                                                                                          <  7:143457‑M1/123‑41 (MQ=255)
                                                                  tAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACCTCAATc                                                                                 <  8:214209/148‑1 (MQ=255)
                                                                    aTTCTGAATAAAACCAGGAGAAGTTTAGCTCATTTCTCACTTGCTCAAACATCTATTGAAAAACAAAGACCTGATACATCAtagactggccccctgaatctccagacaaccaataacacttaaaaaagagatattcttaatactagttt                                                                              >  5:354706‑M1/1‑81 (MQ=255)
                                                                       gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCt                                                                           <  1:228828‑M1/76‑1 (MQ=255)
                                                                             atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCtt                                                                     <  5:246845‑M1/82‑1 (MQ=255)
                                                                              tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACAACTTCAATCTGGTCTGTCCttt                                                                    <  6:368140‑M1/83‑1 (MQ=255)
                                                                              aaaCCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                                                                    >  1:322987‑M1/1‑71 (MQ=255)
                                                                               ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGttt                                                                                              <  3:25249‑M1/57‑1 (MQ=255)
                                                                               ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGttt                                                                                              >  4:25249‑M1/66‑122 (MQ=255)
                                                                                tgctgaagcgggcttgtacttggttaagtgataacagatttctttaaatataggggaaaatcaaCATAACGATAATAACCTATTGTTAGTTTTGAGACTGCTTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTgg                                                                  >  4:303094‑M1/65‑149 (MQ=255)
                                                                                 gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCa                                                                                         >  3:384568‑M1/64‑125 (MQ=255)
                                                                                  cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTgg                                                                  >  4:308139‑M1/63‑147 (MQ=255)
                                                                                  cAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt                                                                >  7:96614‑M1/1‑67 (MQ=255)
                                                                                     cagcgggcttgttatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCtgtg                                                             >  2:323326‑M1/60‑149 (MQ=255)
                                                                                          gTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca                                                        <  6:301965‑M1/149‑91 (MQ=255)
                                                                                           ttttGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataag                                                                                                   <  3:337335‑M1/105‑48 (MQ=255)
                                                                                           ttttGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataag                                                                                                   >  4:331918‑M1/1‑58 (MQ=255)
                                                                                           ttttGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataag                                                                                                   >  4:337335‑M1/1‑58 (MQ=255)
                                                                                           ttttGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataag                                                                                                   <  3:331918‑M1/105‑48 (MQ=255)
                                                                                             ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTa                                                      <  4:44735‑M1/97‑1 (MQ=255)
                                                                                                  atgggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAgt                                                <  1:48674‑M1/103‑1 (MQ=255)
                                                                                                     ggttaagtgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAgtgt                                              >  3:44735‑M1/44‑148 (MQ=255)
                                                                                                        tcACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct                                          >  2:205986‑M1/1‑45 (MQ=255)
                                                                                                          aCTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                         <  3:250616‑M1/148‑106 (MQ=255)
                                                                                                          aCTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                         <  1:205986‑M1/148‑106 (MQ=255)
                                                                                                          aCTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                               <  4:299798‑M1/126‑84 (MQ=255)
                                                                                                          aCTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                               >  3:299798‑M1/1‑43 (MQ=255)
                                                                                                          aCTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATa                                          >  8:404731/1‑147 (MQ=255)
                                                                                                            tgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCg                                                                                                  <  2:78667‑M1/53‑1 (MQ=255)
                                                                                                            tgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCg                                                                                                  >  1:78667‑M1/37‑89 (MQ=255)
                                                                                                            tgataacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAgg                                      >  3:350388‑M1/37‑149 (MQ=255)
                                                                                                                aacagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGaa                                   <  1:410211‑M1/116‑1 (MQ=255)
                                                                                                                 cAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAata                                 >  1:355703/1‑149 (MQ=255)
                                                                                                                 acagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAata                                 <  7:267366‑M1/118‑1 (MQ=255)
                                                                                                                 acagatgtctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAat                                  <  8:332346‑M1/117‑1 (MQ=255)
                                                                                                                  aaaCATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg                                 <  2:322987‑M1/148‑114 (MQ=255)
                                                                                                                  aaaCATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAatat                                >  2:225907/1‑149 (MQ=255)
                                                                                                                    aCATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggag                               >  4:288407‑M1/1‑33 (MQ=255)
                                                                                                                    aCATCTTTTGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggag                               >  7:177701‑M1/1‑33 (MQ=255)
                                                                                                                      aTCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGa                                            >  6:299423/1‑133 (MQ=255)
                                                                                                                        tctggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAAt                          <  7:289028‑M1/125‑1 (MQ=255)
                                                                                                                         ttttGAAAAACAACGCCCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgcttgatgtcttagggccggagaaacg                          >  6:99608‑M1/1‑28 (MQ=255)
                                                                                                                         ttttGAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg                          >  6:286635‑M1/1‑28 (MQ=255)
                                                                                                                          tggaaatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATtc                        <  4:288687‑M1/127‑1 (MQ=255)
                                                                                                                             gAAAAACAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac                     >  7:1000‑M1/1‑24 (MQ=255)
                                                                                                                              aatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACtt                                                                                      >  7:55986‑M1/19‑83 (MQ=255)
                                                                                                                              aatataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACtt                                                                                      <  8:55986‑M1/65‑1 (MQ=255)
                                                                                                                                aaaCAACGACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc                  <  8:177701‑M1/149‑129 (MQ=255)
                                                                                                                                 ataggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGt                 <  8:47036‑M1/134‑1 (MQ=255)
                                                                                                                                  taggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTg                >  2:228828‑M1/15‑149 (MQ=255)
                                                                                                                                   caacGCCCTGATCCATCAtagactggccccctgaatctccagacaaccagtatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta               >  4:186667‑M1/1‑18 (MQ=255)
                                                                                                                                    ggggcaaatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGa               >  7:332346‑M1/13‑148 (MQ=255)
                                                                                                                                       gACCTGATCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggcaggagaaacgcagacggcgtacca            >  3:47321‑M1/1‑14 (MQ=255)
                                                                                                                                          aatccaCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCAtttt        >  8:289028‑M1/7‑149 (MQ=255)
                                                                                                                                             aTCCATCAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag       <  5:286635‑M1/147‑140 (MQ=255)
                                                                                                                                             aTCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCAGGTGAGCATTTTGc      >  4:245307/1‑148 (MQ=255)
                                                                                                                                              caCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCaa    >  6:246845‑M1/3‑149 (MQ=255)
                                                                                                                                               aCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCt                                                                <  2:246471‑M1/87‑1 (MQ=255)
                                                                                                                                               aCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCt                                                                >  1:246471‑M1/2‑88 (MQ=255)
                                                                                                                                                cATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGCTCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACg  >  1:348849/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
GTGAGTAATAATTCTGATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACGGTGATGTTTTAATTCTGAATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAACGACCTGATCCATCAGGATAATAACCTCTTGTTAGTTGTGAGACTGCGTAGTGTGCACGATCGGTTTTACCACTTCAATCTGGTCTGTCCTTTGGCTGTGATATGTACAGAGTGTGATAGAGGGAATATCTGAATTCTCCCGGTGAGCATTTTGCAACG  >  NC_000913/1212961‑1213253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.