New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3429875 =	41 (1.100)	5 (0.150)	4/262	4.2	11.0%	coding (149/258 nt)	yrdB	DUF1488 family protein
	?	NC_000913	3429908 =	43 (1.250)					coding (116/258 nt)	yrdB	DUF1488 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAATTACGTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCA  >  NC_000913/3429732‑3430022                                                                                                                                                |                                                                                                                                                    ataatTACGTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGc                                                                                                                                                <  2:67145/149‑1 (MQ=255)          tGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCa                                                                                                                                       <  1:137692/149‑1 (MQ=255)           gAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAtcgctt                                                                                                                                       >  5:136132/1‑144 (MQ=255)            aaaTGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGt                                                                                                                                     <  2:106345/149‑1 (MQ=255)              aTGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCt                                                                                                                                                   <  6:77053/133‑1 (MQ=255)              aTGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCt                                                                                                                                                   >  5:77053/1‑133 (MQ=255)                               tGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc                                                                                                                  >  5:151486/1‑149 (MQ=255)                                     aGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGc                                                                                                              >  5:134517/1‑147 (MQ=255)                                      gggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGc                                                                                                              >  3:48770/1‑146 (MQ=255)                                                  ccAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATg                                                                                               >  7:133564/1‑149 (MQ=255)                                                          gATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt                                                                                         <  5:38524/147‑1 (MQ=255)                                                            tcatcTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCaga                                                                                                          >  1:123283/1‑128 (MQ=255)                                                            tcatcTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCaga                                                                                                          <  2:123283/128‑1 (MQ=255)                                                            tcatcTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCAt                                                                                     <  7:133748/149‑1 (MQ=255)                                                                  tCACTTTGTTCCTTAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGGTATGCTTACTAAAACTCGCTAACCACTGTTCTGGCGTATCTCCCGTAAAGCTATACGCCAGACTCTCGCCAGAGATCGCGCAt                                                                                                <  2:119461/132‑1 (MQ=255)                                                                  tCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCAt                                                                                                >  1:119461/1‑132 (MQ=255)                                                                   cACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc                                                                                  <  6:151486/145‑1 (MQ=255)                                                                   cACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCa                                                                                 <  6:134517/146‑1 (MQ=255)                                                                      tttGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCAc                                                                            >  6:146462/1‑148 (MQ=255)                                                                      tttGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCAAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCAc                                                                            >  8:62900/1‑148 (MQ=255)                                                                            ccTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCg                                                                     >  6:115637/1‑149 (MQ=255)                                                                              tGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCgg                                                                    >  6:37670/1‑148 (MQ=255)                                                                                aaTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaa                                                                 <  5:115637/149‑1 (MQ=255)                                                                                aaTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGa                                                                  >  4:79661/1‑148 (MQ=255)                                                                                 aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc                                                                                                    <  6:118296/113‑1 (MQ=255)                                                                                      gTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATa                                                           <  8:133564/149‑1 (MQ=255)                                                                                                 cttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTa                                                >  8:91201/1‑149 (MQ=255)                                                                                                     ttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATtct                                            >  7:103725/1‑149 (MQ=255)                                                                                                      tcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATtctc                                           >  3:76495/1‑149 (MQ=255)                                                                                                       ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATtctc                                           <  7:95155/148‑1 (MQ=255)                                                                                                         aGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTc                                        <  5:37670/149‑1 (MQ=255)                                                                                                         aGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTc                                        <  4:76495/149‑1 (MQ=255)                                                                                                           gTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTcc                                       >  2:75766/1‑148 (MQ=255)                                                                                                              ccAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCAct                                   >  1:76322/1‑149 (MQ=255)                                                                                                                        tGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTc                         >  2:26817/1‑149 (MQ=255)                                                                                                                            gAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCgg                      >  7:127033/1‑148 (MQ=255)                                                                                                                             aaaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGaa                    <  7:62900/149‑1 (MQ=255)                                                                                                                              aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGaaa                   <  4:48770/149‑1 (MQ=255)                                                                                                                                    gCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGa              <  8:103725/148‑1 (MQ=255)                                                                                                                                         ccACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCt        <  8:127033/149‑1 (MQ=255)                                                                                                                                               ttCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCa  >  8:67857/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    ATAATTACGTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCA  >  NC_000913/3429732‑3430022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.