| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522063 | 84 (1.070) | 4 (0.060) | 4/230 | NT | 4.9% | intergenic (‑43/+64) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | = 4522085 | 80 (1.110) | intergenic (‑65/+42) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4521908‑4522063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attatccgactCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < NC_000913/4522085‑4521939 GCGATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTA > 1:146594/1‑149GCGATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTA > 3:50155/1‑149 GATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATC < 6:359335/149‑1 GACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT > 3:105485/1‑148 ACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGT > 2:247301/1‑148 TATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGAT < 2:374590/149‑1 TTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATG < 2:23481/148‑1 AAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGG < 1:247301/148‑1 TTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCTGA < 5:328487/103‑1 TTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCTGA > 6:328487/1‑103 TCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGT > 4:50837/1‑149 TCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCATGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGT > 1:62427/1‑149 CCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTT > 8:184402/1‑149 CTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACGCTGTTATGAGAGTACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < 3:273730/149‑1 CTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGACACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < 1:216200/149‑1 GCGATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4521908‑4522063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attatccgactCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < NC_000913/4522085‑4521939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |