| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 289,256 | G→C | 7.7% | intergenic (‑94/+45) | yagI ← / ← argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 289,256 | 0 | G | C | 7.7% | 228.8 / 9.1 | 72 | intergenic (‑94/+45) | yagI/argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Reads supporting (aligned to +/- strand): ref base G (37/29); new base C (2/3); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.40e-01 | |||||||||||
GTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCC > NC_000913/289109‑289400 | gTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgt > 2:163479/1‑149 (MQ=255)gTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgt < 8:206799/149‑1 (MQ=255) ttGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgtg < 7:281562/149‑1 (MQ=255) ttGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGAATAATGCTGGCATGTCCACGCTGGAATTAAGGCTAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgtg < 7:139973/149‑1 (MQ=255) gAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATTTCCACGCTGGAATTAAGGCGATAACGTACCTTTTTCGGGATGAAAAATCATTGAAATGGAGCCGGT‑GT‑TCTCCCTCTGCCTGTgg < 2:265137/148‑1 (MQ=255) gAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTgg < 5:227497/148‑1 (MQ=255) cAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGgaga < 1:163479/149‑1 (MQ=255) aGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAATGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGagag < 6:295571/149‑1 (MQ=255) ggTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCACAGGGAGAgg < 6:375387/149‑1 (MQ=255) ggTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCGCCCTCTCCCACAGGGAGAgg < 3:352959/149‑1 (MQ=255) aGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCgg < 2:55485/149‑1 (MQ=255) cTGCAACGCACGGTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGa < 1:160769/149‑1 (MQ=255) tGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGt > 2:160769/1‑146 (MQ=255) cAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAggg < 6:36977/149‑1 (MQ=255) aCGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 7:348327/1‑149 (MQ=255) ctcACGTTCAAAAGACTTATTAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACTTAGCTTTTTCGGGATGAAAATTCAATGAATTGGCGCCGGT‑TT‑TCACCCTCTCCGTGTGGGAGAGGGCGGGGGTGAGGGCAc < 6:17425/147‑1 (MQ=255) gCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAc > 1:15151/1‑148 (MQ=255) aCGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCaa > 3:68006/1‑149 (MQ=255) gTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAAcg > 1:233658/1‑149 (MQ=255) gTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAAcg > 3:295926/1‑149 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgtg < 6:224610/117‑1 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgtg > 5:224610/1‑117 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAAcgcg > 3:99530/1‑147 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAAcgcg > 1:274595/1‑147 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAAcgcg > 5:203519/1‑147 (MQ=255) aCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAg > 4:92309/1‑149 (MQ=255) cAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGc > 7:194041/1‑149 (MQ=255) tGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGAcc > 6:30741/1‑149 (MQ=255) tGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGAcc > 1:170374/1‑149 (MQ=255) gAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCCCAACGCGCAGCGGAcc > 2:174171/1‑148 (MQ=255) aatatgcGGCATAATGGTGGCATGTCCCCGATTGAATTACGGCGAAAACGTACCTTTTTCGTGATTAAAAATCATTCAAATGGACCCGGT‑GT‑TCTCCCTCTCCCTGTGGGCGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGAccc < 6:350807/142‑1 (MQ=255) taatCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGgaga < 8:218967/111‑1 (MQ=255) taatCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGgaga > 7:218967/1‑111 (MQ=255) gCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTcc > 3:195441/1‑149 (MQ=255) aTAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgt < 3:230120/97‑1 (MQ=255) aTAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCtgt > 4:230120/1‑97 (MQ=255) ggCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTg > 2:221239/1‑149 (MQ=255) aTGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGCCCCAATCACTCCCCAAGCGTTGCca > 6:123846/1‑149 (MQ=255) gcccACGCTGTAATTAAGGCTAAAACTTACTTTTTTGGGGTTCAAAAATCATTGAATTGGCGCCGGT‑GT‑TCTCCCGCCCCCTGGGGGTGTGGGCCGGGGGGCGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCcatc < 4:295926/147‑1 (MQ=255) cACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTcc > 1:212278/1‑131 (MQ=255) cACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCcatcat > 7:374730/1‑148 (MQ=255) aaCGCTGTAATTAAGGCTAAAACGTACCTTTTTCGGGATTAAAAATCAATGAAATGGAGCCGGT‑TT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTcc < 2:212278/130‑1 (MQ=255) ccttgAATTACGGCCAAAACGTACCTTTTGCGTGATCAAAAAGAAATCAAATGGAGCGGGT‑GG‑TCTCCCTCCCCCTGGGGTCGTGGGCGGGGGTGAGGCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCAcc < 1:157058/145‑1 (MQ=255) aGGCGAAACCGTACCTTTTTCGGGATTAAAAATCAATGAAAGGGCGCCGGT‑GT‑GCTCCCTCTCCCTGGGGGAGAGGGCCGGGGGGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATc < 3:92309/148‑1 (MQ=255) aGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCg > 4:321418/1‑149 (MQ=255) gctaaaaCGTACCTTTTTCGGGATTAAAAATCAATTAATTGGCGCGGGT‑GT‑TCTCCCTCGCCCGGGGGTTGTGGGCCGGGGGGAGGGCACCAACGCGCAGGGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTa < 4:99530/146‑1 (MQ=255) gCGAAAACGTACCTTTTTCGGGATTAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTa < 2:274595/149‑1 (MQ=255) ctaaaaCGTACCTTTTTCGGGATGAAAAATCAATCAAAGGGACCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGTGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTAt < 2:233658/147‑1 (MQ=255) cGAAACCGTACCTTTTTCGGTATTAAAAATCAATTAAATGGAGCCGGG‑GT‑TCTCCCTCTCCCTGGGGGAGCGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTAt < 2:280394/149‑1 (MQ=255) cGAAACCGACCCTTTTTGGGGATGAAAAATCAATGAAAGGGACCCGGT‑GT‑GCTCCCTCTCCCTGGGGGAGAGGGCCGGGGGGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTAt < 5:157200/149‑1 (MQ=255) acaaacCGTACTTTTTGGGGTATCAAAAAACAAT‑AAATGGGCGCGGG‑GTGTCTCCCTCTCCGTGGGGGCGTGGGCGGGGGGGCGGCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTAt < 5:30741/147‑1 (MQ=255) gAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATg > 3:100977/1‑149 (MQ=255) aCGTCCCTTTTGCGGGACTAAAAATCATTGAACGGCCCCGGGT‑GT‑GCTCCCTCGCCGTGGGGGAGTGGGCCGGGGGGTGGCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATc < 5:123846/149‑1 (MQ=255) gTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAAt > 3:208066/1‑102 (MQ=255) gTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCg > 7:338445/1‑149 (MQ=255) tcatttttCGGTGTTAAAAATACATTAAAGGGTGGCGGTGGT‑GCTCCCGCTCCGTGGGTGTTTGGGCGGGGGTGAGGCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCg < 8:348327/145‑1 (MQ=255) ccTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGGGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGtt < 1:221239/149‑1 (MQ=255) cTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCACAGGGAGAgg > 5:262323/1‑62 (MQ=38) cTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCACAGGGAGAgg < 6:262323/62‑1 (MQ=38) ggATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCACCGGACCCAATCACTCCCCAACCGTTCCCATCATCACCGCCTTAATCTTATCCAACCGGTTTACCCCCTg > 2:248362/1‑149 (MQ=38) gATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCACGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTgg > 2:344650/1‑149 (MQ=255) gAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGACATCATCACCGCCTTAATCGTTTGCATCCGGGTTTCCGCCTGGTc > 8:379154/1‑148 (MQ=255) aTGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATg > 6:367559/1‑149 (MQ=255) aaaTGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCa > 7:126960/1‑63 (MQ=255) aaTGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAac > 7:205414/1‑139 (MQ=255) ggT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACt > 7:265137/1‑149 (MQ=255) t‑gt‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGGTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGCTGCTCGCCGCCGACTc > 3:201894/1‑148 (MQ=255) ctccctctccctGTGGGAGTGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAac < 1:248362/148‑1 (MQ=255) accctctccgtGTGGTTGTGGGCGGGGGGGCGGCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAaca < 1:174171/147‑1 (MQ=255) cctctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGTGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCt > 2:80017/1‑149 (MQ=255) cctctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGCATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCt > 1:121457/1‑149 (MQ=255) cctctccctGTGGGAGAGGGCCGGGGTGAGGGCACAAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATACGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCt > 3:260085/1‑149 (MQ=255) cctctcccaCAGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCt > 7:149312/1‑149 (MQ=255) cctctcccaAAGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCt > 2:368124/1‑149 (MQ=255) tctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTgg > 7:203392/1‑113 (MQ=255) tctccctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTgg < 8:203392/113‑1 (MQ=255) cgctGGGGGTGAGGGCGGGGGTGCGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtcc < 2:170374/147‑1 (MQ=255) cctGTGGTTGTGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtc < 2:15151/147‑1 (MQ=255) cctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTcgcc < 8:155765/127‑1 (MQ=255) cctGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTcgcc > 7:155765/1‑127 (MQ=255) | GTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGT‑GT‑TCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCC > NC_000913/289109‑289400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |