| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3873741 = | 120 (1.410) | 5 (0.060) | 4/270 | 8.8 | 4.1% | coding (734/879 nt) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase |
| ? | NC_000913 | 3873793 = | 119 (1.470) | coding (682/879 nt) | dgoK | 2‑oxo‑3‑deoxygalactonate kinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3873894‑3873741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaacaAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCTGCG > NC_000913/3873793‑3873939 GTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCAT < 6:32741/149‑1GTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCAT > 3:13213/1‑149 TCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC < 7:249065/149‑1 TCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC < 8:35434/149‑1 CTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC > 1:46930/1‑148 CTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC > 8:39211/1‑148 TTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGAGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAA > 1:269538/1‑149 ATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC > 8:7999/1‑131 ATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC < 7:7999/131‑1 AACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC > 8:181565/1‑75 AACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATC < 7:181565/75‑1 GTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCG > 4:44573/1‑148 TTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTA > 3:111162/1‑149 TTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACAAACCAGAGAGAAATTCGCTGA > 2:36813/1‑75 TTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACAAACCAGAGAGAAATTCGCTGA < 1:36813/75‑1 AGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAG < 4:111162/149‑1 ATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTC > 6:138503/1‑149 ATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTC > 4:106803/1‑149 ATCAACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTC < 1:346699/149‑1 AACGAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCTG < 2:320920/149‑1 AACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCTGGAGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGTCAGAGTTTTCATG > 6:14225/1‑149 AACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCTG > 8:224668/1‑149 AACAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCACGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCT < 2:346281/148‑1 CAAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCTGCG > 7:141787/1‑149 GTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3873894‑3873741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaacaAACCAGAGAGAAATTCGCTGACCTGTTCGCGGGGAAGTGTTCCCAGCACATGCGAGGCGCGAACTTCAAAAAGCTGCGGCAATATGGCGGGCGTATTAAGACCACGCTCAAGGCCAGCTGTGAAGGCATCGGCAGAGTTTTCCTGCG > NC_000913/3873793‑3873939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |