New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 109728221 (0.180)21 (0.190) 18/276 10.7 40.5% intergenic (+453/+283) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 = 1097467 42 (0.370)intergenic (+638/+98) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

TCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1097133‑1097282
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactggcGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGA  <  NC_000913/1097467‑1097319
                                                                                                                                                                                                                                                                                                           
TCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGC                                                                                                                                                       >  1:1150958/1‑150
                            GAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTG                                                                                                                                                         <  2:582145/120‑1
                            GAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTG                                                                                                                                                         >  1:582145/1‑120
                             AAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        >  2:180686/1‑120
                             AAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        <  1:180686/120‑1
                              AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            <  1:124499/115‑1
                              AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            >  2:124499/1‑115
                                                  TACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGT                                                                                                                                             >  3:446402/1‑110
                                                  TACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGT                                                                                                                                             <  4:446402/110‑1
                                                              tcTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGC                                                                                                                                                 <  1:133286/92‑1
                                                              TTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGC                                                                                                                                                 >  2:133286/1‑94
                                                                      TGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAC                                                                                                                                                           <  4:61068/76‑1
                                                                      TGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAC                                                                                                                                                           >  3:61068/1‑76
                                                                         CGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        >  3:52441/1‑76
                                                                         CGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        <  4:52441/76‑1
                                                                                GGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACc                                                                                                                                                   >  1:39179/1‑73
                                                                                GGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACA                                                                                                                                                   <  2:39179/74‑1
                                                                                            TCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGT                                                                                                                        <  1:832800/89‑1
                                                                                            TCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGT                                                                                                                        >  2:832800/1‑89
                                                                                            TCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        <  2:384647/57‑1
                                                                                            TCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGG                                                                                                                                                        >  1:384647/1‑57
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           <  3:277480/63‑1
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           >  4:277480/1‑63
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            <  1:1275871/46‑1
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            >  2:1275871/1‑46
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            >  3:291451/1‑46
                                                                                                   GCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            <  4:291451/46‑1
                                                                                                     TCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACCGCCAG                                                                                                                                              >  2:300701/1‑58
                                                                                                     TCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAG                                                                                                                                              <  1:300701/58‑1
                                                                                                       GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           >  1:354866/1‑59
                                                                                                       GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           <  2:354866/59‑1
                                                                                                           TGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            <  1:631872/38‑1
                                                                                                           TGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAA                                                                                                                                                            >  2:631872/1‑38
                                                                                                                    CCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGC                                                                                                                                                 <  2:818737/40‑1
                                                                                                                    CCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGACAGC                                                                                                                                                 >  1:818737/1‑40
                                                                                                                           ACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           <  4:82659/39‑1
                                                                                                                           ACTGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTTG                                                                                                                                           >  3:82659/1‑39
                                                                                                                             TGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTT                                                                                                                                            >  2:498053/1‑36
                                                                                                                             TGCGTTCACGGTCTGTCCAACTGGCGACAGCCAGTT                                                                                                                                            <  1:498053/36‑1
                                                                                                                                            TCCAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCATCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACA           >  1:1306234/1‑150
                                                                                                                                             gCAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACAC          <  4:231069/149‑1
                                                                                                                                             gCAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACAC          <  4:526290/149‑1
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCAACGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCG        >  4:581084/1‑150
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCC                                                                             >  1:958480/1‑81
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCC                                                                             <  2:958480/81‑1
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCC                                                                               >  2:30147/1‑79
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCC                                                                               <  1:30147/79‑1
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGC                                                                                                    >  4:397949/1‑58
                                                                                                                                               AACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGC                                                                                                    <  3:397949/58‑1
                                                                                                                                                ACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTCCGGGCTTTTTTTTCGTATATTGCACACACCGG       <  2:1227922/150‑1
                                                                                                                                                 CTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGG      >  2:306588/1‑150
                                                                                                                                                 CTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGG      >  2:303547/1‑150
                                                                                                                                                  TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGG     >  2:1202531/1‑150
                                                                                                                                                  TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAA                                                        <  2:1312021/99‑1
                                                                                                                                                  TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAA                                                        >  1:1312021/1‑99
                                                                                                                                                  TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAG                                                                                        >  3:294877/1‑67
                                                                                                                                                  TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAG                                                                                        <  4:294877/67‑1
                                                                                                                                                   GGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAG                                                                                                       <  2:374926/51‑1
                                                                                                                                                   GGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAG                                                                                                       >  1:374926/1‑51
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCC                                                                             >  2:506148/1‑76
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCC                                                                             <  1:506148/76‑1
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGC                                                                                                    >  3:88576/1‑53
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGC                                                                                                    <  4:88576/53‑1
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTG                                                                                                              <  2:151865/43‑1
                                                                                                                                                    GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTG                                                                                                              >  1:151865/1‑43
                                                                                                                                                     CGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGA  <  2:642515/150‑1
                                                                                                                                                     CGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGA  <  1:788136/150‑1
                                                                                                                                                                                                                                                                                                           
TCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1097133‑1097282
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caactggcGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGA  <  NC_000913/1097467‑1097319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.