New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1097294	26 (0.220)	25 (0.220)	19/276	10.3	49.2%	intergenic (+465/+271)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
	?	NC_000913	= 1097455	27 (0.240)					intergenic (+626/+110)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

GCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACT  >  NC_000913/1097152‑1097439                                                                                                                                               |                                                                                                                                                  gCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcc                                                                                                                                            >  4:200128/1‑150 (MQ=32)   aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcccc                                                                                                                                          <  1:1080654/150‑1 (MQ=32)     tACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCgg                                                                                                                                        >  1:1314962/1‑150 (MQ=32)                                                                                                             cGTTCCCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAGAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAAATATGGCCGTGAGGGGGGGATTGTCtcgc                                <  4:136265/150‑1 (MQ=11)                                                                                                               ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                              <  1:377243/150‑1 (MQ=34)                                                                                                                     gTCTGTTCATCTGGCTGTCGTGAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCTCCCAGTGTGTGCAATATACGAAAAAAAACACCATACTTTCGTACGAGCTCGTCTTTAAATATGGTGGTGATGGGGGGATTTACtggcttcaatcg                        >  4:282217/1‑145 (MQ=11)                                                                                                                     gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATAAGAAAACAAAGCCCGTACTATCCTACGAGATACTCTTTTAACATGGCGGCGAGGGGGGGATTGACTCGCTtcgctcg                        >  1:273090/1‑150 (MQ=11)                                                                                                                       ctctCCAACTGCCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTTTCATCCCCCCTGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGGGCTCTTCTTTAAATGTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                      <  1:974431/147‑1 (MQ=11)                                                                                                                       cTGTCCAACTTGCTGTCGCCAGTTGTCAAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTCTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                      <  3:38566/150‑1 (MQ=255)                                                                                                                       cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                      <  3:282217/150‑1 (MQ=35)                                                                                                                       cTGTCCAACTGGCTGTCGCCAGTTGTCAAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                      <  1:892574/150‑1 (MQ=21)                                                                                                                       cTGTCCAACTGGCTGTCGCCAGTTGTCAAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                      <  3:444529/150‑1 (MQ=25)                                                                                                                        tGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGccc                     >  1:752444/1‑150 (MQ=35)                                                                                                                         gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTCCTCAGCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCt                    <  1:13028/150‑1 (MQ=21)                                                                                                                          tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg                   >  2:186666/1‑150 (MQ=35)                                                                                                                          tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg                   >  1:303547/1‑150 (MQ=35)                                                                                                                            cAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTCAGGGGGGGATTGACTCCCCTCGCTCGCCCTGCg                 >  4:602410/1‑150 (MQ=255)                                                                                                                                  gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGGTTCGCAACCCCCCGGGGTGGGCAACCTACGAACCAAAGGCCCGTCCTTTCGTACGAGCTCTTCGTGAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGc           >  1:488586/1‑150 (MQ=11)                                                                                                                                  gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGc           >  3:362121/1‑150 (MQ=35)                                                                                                                                    tGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc         <  2:752444/150‑1 (MQ=35)                                                                                                                                      tCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGc       >  1:306588/1‑150 (MQ=35)                                                                                                                                        gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg               <  4:431222/140‑1 (MQ=37)                                                                                                                                        gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg               >  3:431222/1‑140 (MQ=35)                                                                                                                                         ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCa    >  2:1057222/1‑150 (MQ=35)                                                                                                                                         ccAGTTGTCGAACCCCGGCCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCCCGCCCTGCGGGCAGCCCGCTCa    >  1:1229310/1‑150 (MQ=25)                                                                                                                                           aGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCACTGCGGTCAGCCCGCTCACt  >  1:780448/1‑150 (MQ=25)                                                                                                                                               |                                                                                                                                                  GCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACT  >  NC_000913/1097152‑1097439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.