| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,152 | 0 | A | G | 22.4% | 157.3 / 17.4 | 85 | intergenic (+135/‑63) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (55/11); new base G (0/19); total (55/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGT > NC_000913/3781005‑3781298 | gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAgg < 1:1383657/150‑1 (MQ=255)gAATGCGGCATAGTCGGTTGCGCCCCGGCACCCTAACCCTCTCCCTCAGGGAGAGGGGCCCGTTCGG‑CGCTGTATGTTCTCCCTCACTCTGAAACGA‑CACCGCACTCCTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAgg < 3:318628/150‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCACCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGCCCGTTCGG‑CGATGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GCGGGCCGGGGCGAggg > 2:693817/1‑150 (MQ=255) aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCGCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAgggg < 2:783046/150‑1 (MQ=255) gCATAGTCGTTTGCGCACCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAg > 1:1109692/1‑150 (MQ=255) aTAGTCGTTTGCGCCCCCTCCCCCTAACCCCCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCGGTATGTACCCCCCCCCCCTGAACCGC‑CACCGAACTCTTTTTTTCTCCCCCGCCCCCCCGGGGA‑GGGGGCCGGGGTGAGGGG‑AAAAGGc < 4:187665/150‑1 (MQ=255) tCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGcc > 2:1005513/1‑149 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTGCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCGCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAACGGCCGGACt > 1:852471/1‑150 (MQ=255) tcggcgcCCCCTCCCCCTCCCCCCCCCCCGCGGGGGGGGGGGCCCGTCGGG‑CGTTGTATGTCCCCCCTCCCTCTGAACCGC‑CCCCGCCCTTTTTTTTGCCCCCCCGCCCCGCGGGGGG‑GGGGGCGGGGGTGAGGGG‑AAAAGGCCGCACTg < 2:308639/147‑1 (MQ=255) gcCCCCTCACCCTAACCCTCACCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTGTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑ACAAGGCGGCACTGCTCAc > 1:504289/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCCCACCAAtt > 2:936263/1‑150 (MQ=255) ccttcgcccTCTCCCTCGGGGAG‑GGGGGCCGTTTGGTCTTTTTATGTTCTCCCTCACT‑GGAAAAGACCCCCGCTCTTTTTTTTTCTCCCCCGCCCGGCGGGGGG‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt < 1:1172269/144‑1 (MQ=255) cccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt > 3:206217/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 2:1196736/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 1:1272594/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 3:392784/1‑150 (MQ=255) tAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCt > 1:1077158/1‑150 (MQ=255) taCCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTa > 3:113027/2‑150 (MQ=255) cccTCTCCCTGAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCGTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCACACAATGGA‑GAGGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:1008860/1‑150 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:1364407/1‑150 (MQ=255) ccTGAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 4:440346/1‑150 (MQ=255) ctgggggAGGGGGCCCCTTGCGG‑CGGTGTTTTTCCCCCCCCCCTGTGAACCGA‑CCCCGCACTTTTTTTTTCCCCCCCCCCCCCCGGGGGG‑GGGGGCGGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc < 1:1338383/146‑1 (MQ=255) cTCGGGGAGGGGGGCCCGTGCGG‑GGCTTTATGTCCCCCCCCTCTCGGAACCGA‑CCCCCCCCTCTTTTTTCCTCCCCCCCCCCCCCGGGGG‑GGGGGCGGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc < 2:1250312/150‑1 (MQ=255) tCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 2:239846/1‑150 (MQ=255) tCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTCCCCCCg > 2:1198367/1‑150 (MQ=255) ggggGAGGGGTCGTTTCGG‑TGTTTTATGTCCCCCCCCCCTCTAACACAG‑CCCCGCACTTTTTTTTTCCCCCGCGCCCCTCGGGGGA‑GGGGGCCGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc < 1:1083923/150‑1 (MQ=255) ggAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt > 2:932132/1‑150 (MQ=255) gagaGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCACTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 1:27725/1‑150 (MQ=255) gagaGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCACTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 1:1264355/1‑150 (MQ=255) ggggCCCGTCCGG‑CGCTTTATGTACCCCCTCCCTCAAAACCGA‑CCCCCCACTCTTTTTTCCTCCCCCCCCCCCCGGGGGA‑GGGGGCGGGGGGGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 1:236774/150‑1 (MQ=255) gggcccggTTGGG‑CGCTTTTTGTCCTCCCCCCCTGGCAACCGC‑CGCCCCCCTCTTTTTTCCCCCCCCCCCCCCCCGGGGA‑GGGGGCCGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 4:298772/143‑1 (MQ=255) gggACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAACGGCCGCACTGCTCACCAATCTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:1147415/1‑150 (MQ=255) gggACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:138076/1‑150 (MQ=255) gggACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 4:113743/1‑150 (MQ=255) gggACCGTTCGG‑CGATGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 4:39693/1‑150 (MQ=255) ggACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGGCCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg > 1:83377/1‑150 (MQ=255) aaCCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggggt > 2:1332379/2‑149 (MQ=255) cccGTCCGG‑CGCTGTTGGTACCCCCTCCCTCTAAACCCC‑CCCCCCTCTTTTTTTTCCCCCCCCCCCCCCGGGGGGG‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa < 3:22599/149‑1 (MQ=255) aCCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa > 2:1211916/1‑150 (MQ=255) ccGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACAAAGGGGGCAg > 1:269240/1‑150 (MQ=255) ttCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 1:422919/1‑150 (MQ=255) g‑cgcTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTGTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa > 2:496485/1‑150 (MQ=255) tCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGTTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:959497/1‑150 (MQ=255) tCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:846889/1‑150 (MQ=255) gcTCACACTGAAACGA‑CACCGCACTCTTTTTTGCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGCGGCAGTATGCTAAACATAGTACttacc > 2:122173/2‑147 (MQ=255) ccTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGC‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 4:520291/1‑150 (MQ=255) ccTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:810830/1‑150 (MQ=255) cTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg > 1:526423/1‑150 (MQ=255) aCTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:1182035/1‑150 (MQ=255) tctGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 4:451386/1‑150 (MQ=255) tctGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 2:993798/1‑150 (MQ=255) aCGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt > 1:189921/1‑150 (MQ=255) cacCGCCCTGTTTTTTCCGCCCGCCCCCCGCGGGGGG‑GGGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGc < 2:1115410/150‑1 (MQ=255) cccGCGCTCTTTTTGCCCCCCGCGCCCCTCCGGGGG‑GAGGCCGGGGGGGAGGGG‑TAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGcc < 2:1112989/149‑1 (MQ=255) ccGCACTCTTTTTTTTTTTTTTTTCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCa > 2:365118/1‑150 (MQ=255) cccccttttttttcCCCCCCCGCCCCCCGGGGGG‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa < 1:1371489/143‑1 (MQ=255) gccctttttttttCTCCCGCCCCCCTCGGGGGG‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaaa < 2:83147/144‑1 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:344608/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 2:854184/1‑150 (MQ=255) tttttttCCCCCCCCCCCCCCCCGGGAGGAGGGCGGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg < 2:422919/150‑1 (MQ=255) tttttcCCCCCCCCCCCCCCGGGGGA‑GGGGCCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc < 1:1376359/150‑1 (MQ=255) tttccgcccccgcccccgCGGGGA‑GAGGGCGGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCaa < 2:1132835/144‑1 (MQ=255) tctcCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcat > 2:42181/1‑150 (MQ=255) cccTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:1373983/1‑150 (MQ=255) ccTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 3:140085/1‑150 (MQ=255) ccTCCCCCCTGGGGGGG‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc < 1:1072771/150‑1 (MQ=255) ccccccccccGGGGGG‑GAGGGCGGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc < 2:1272594/146‑1 (MQ=255) tCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 3:491470/1‑150 (MQ=255) gCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTc > 4:49653/1‑150 (MQ=255) ccccTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCt > 1:330163/1‑150 (MQ=255) cccgggggg‑gggggCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg < 1:1222937/146‑1 (MQ=255) ccccGGGGA‑GGGGGCGGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg < 1:1149537/148‑1 (MQ=255) cTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 1:925371/1‑150 (MQ=255) cTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 1:570768/1‑150 (MQ=255) ggaggggC‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgc < 1:555446/147‑1 (MQ=255) cGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcgc > 1:1190570/1‑150 (MQ=255) ggA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTaa > 1:456187/1‑150 (MQ=255) ggggggggCCGGGGGGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTaa < 1:555792/145‑1 (MQ=255) gtgggCCGGGGTGGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAc < 1:362194/148‑1 (MQ=255) gggggCGGGGGGGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAc < 1:1246097/148‑1 (MQ=255) ggggCCGGGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAc < 4:282504/149‑1 (MQ=255) gggCCGGGGGGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCg < 1:810830/150‑1 (MQ=255) cgggggTGGGGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCt < 1:1245864/148‑1 (MQ=255) ggTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAGGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCg > 2:740887/1‑150 (MQ=255) gTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGt > 4:368534/1‑150 (MQ=255) | GAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGG‑CGCTGTATGTACTCCCTCACTCTGAAACGA‑CACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGA‑GAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGT > NC_000913/3781005‑3781298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |