| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 303629 | 19 (0.610) | 5 (0.180) | 5/218 | 3.0 | 21.3% | intergenic (+24/+224) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein |
| ? | NC_000913 | = 303636 | 20 (0.720) | intergenic (+31/+217) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein | |||||
TGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAAGAAGTATCG > NC_000913/303500‑303780 | tttgccagcaacaatgcctctcttctgtagcgttcttcggatctacatcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCAttt > 4:106926‑M1/118‑146 (MQ=255) tctggttctggtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaaaaa < 7:128092/149‑1 (MQ=255) gctggttctcgtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCAAGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaaaaa < 7:126269/148‑1 (MQ=255) tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttta > 1:141655‑M2/1‑113 (MQ=255) tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttta < 2:141655‑M2/125‑13 (MQ=255) aaaTTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCt > 5:708/1‑149 (MQ=255) tcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt < 4:84202‑M1/54‑1 (MQ=255) tcatcctgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt > 3:84202‑M1/71‑124 (MQ=255) gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta > 3:60160/1‑149 (MQ=255) tgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAt < 8:81588‑M1/46‑1 (MQ=255) tgaagtagcgcgatatactcactgactatctgcatcagaatataaaaagcaatgtttttaacctATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAt > 7:81588‑M1/65‑110 (MQ=255) aaTTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttt > 8:34396‑M2/1‑80 (MQ=255) aaTTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttt < 7:34396‑M2/91‑12 (MQ=255) cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTAc < 6:708/148‑1 (MQ=255) cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACt > 3:28946/1‑149 (MQ=255) aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCa < 4:60160/149‑1 (MQ=255) gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcg < 8:46879‑M2/149‑82 (MQ=255) aGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatgat < 2:168275/149‑1 (MQ=255) aGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatgat > 1:168275/1‑149 (MQ=255) cTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaagaa < 7:23144/149‑1 (MQ=255) tttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataat < 5:32381‑M2/149‑100 (MQ=255) tAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataat > 7:46879‑M2/1‑48 (MQ=255) tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt < 2:37096/104‑1 (MQ=255) tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt > 1:37096/1‑104 (MQ=255) tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg < 8:32665/121‑1 (MQ=255) tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg > 7:32665/1‑121 (MQ=255) gATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGc < 4:8749/137‑1 (MQ=255) gATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGc > 3:8749/1‑137 (MQ=255) tAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGt > 2:125760/1‑120 (MQ=255) tAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGt < 1:125760/120‑1 (MQ=255) cATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgtaaatctctgcgaataatttcaatagaccagaaccaga > 6:32381‑M2/1‑29 (MQ=255) ttGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCAttgttg > 8:128979/1‑149 (MQ=255) aTGGCGCAAATACAgcgcaatttttatcattaaatgcattatctgtttgagcctaaagggatctcagggtctatctcatgagtaattctgtttagtaaatatctgagaataatatcaatagaacagaac < 1:174576‑M2/129‑116 (MQ=255) TGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATag < 2:123008‑M1/146‑1 (MQ=255) GCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAgaagaa > 1:123008‑M1/1‑149 (MQ=255) aTACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACTCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAAGAAGTATCg < 7:128979/149‑1 (MQ=255) | TGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAAGAAGTATCG > NC_000913/303500‑303780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |