Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,335,759 IS1 (–) +9 bp intergenic (+301/‑64) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)73 (0.900) 57/286 0.4 95.8% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1335767 3 (0.040)intergenic (+309/‑64) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
* ? NC_000913 1335759 =3 (0.040)69 (0.850) 60/286 0.3 95.6% intergenic (+301/‑72) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 151 total aligned reads displayed.

CGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGC  >  NC_000913/1335612‑1335906
                                                                                                                                                   |                                                                                                                                                   
agatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAt                                                                                                                                                    <  2:66876‑M1/2‑1 (MQ=255)
       gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTtgtg                                                                                                                                             <  6:119418‑M1/9‑1 (MQ=255)
       gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTtgtg                                                                                                                                             >  8:238142‑M1/141‑149 (MQ=255)
         tGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTTCGCGATGTTtgt                                                                                                                                              <  8:165455/146‑1 (MQ=255)
         tGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgt                                                                                                                                              <  5:186210/146‑1 (MQ=255)
           tCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGg                                                                                                                                            >  7:256449‑M2/1‑145 (MQ=255)
           atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTa                                                                                                                                          <  2:148151‑M1/12‑1 (MQ=255)
           atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTAt                                                                                                                                         <  7:216652‑M1/13‑1 (MQ=255)
             gtccggcgttgcttttgccgttacgcacaaccccgtctttcgctcaacaggcggtactgctgatagaaactgatgccactggtgcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATc                                                                                                                                        >  3:3414‑M1/135‑148 (MQ=255)
             gATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaat                                                                                                                                       <  4:313450‑M2/149‑7 (MQ=255)
               tGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatga                                                                                                                                     >  1:171906‑M2/1‑141 (MQ=255)
                  gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAat                                                                                                                                  >  1:66876‑M1/130‑149 (MQ=255)
                    ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactcc                                                                                                                                 <  6:322762‑M2/148‑13 (MQ=255)
                      ctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaa                                                                                                                               >  1:199302‑M2/1‑134 (MQ=255)
                         ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCAcc                                                                                                                           <  8:135456‑M1/27‑1 (MQ=255)
                         ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCAcc                                                                                                                           <  7:88492‑M1/27‑1 (MQ=255)
                          gCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttat                                                                                                                          >  7:40290‑M2/1‑130 (MQ=255)
                          gCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGATTTGCCACAAGGTTTCTCGTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttat                                                                                                                          <  4:267322‑M2/149‑20 (MQ=255)
                                   ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATg                                                                                                                                                   >  1:320760/1‑115 (MQ=255)
                                    tctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgtt                                                                                                                <  4:194577‑M2/149‑30 (MQ=255)
                                      caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCa                                                                                                              >  5:119418‑M1/110‑149 (MQ=255)
                                        gATCATTACTCACTGATCCTTGTCCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGTTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgtttta                                                                                                             >  8:271590‑M2/1‑116 (MQ=255)
                                        gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttat                                                                                                            <  7:123261‑M2/149‑34 (MQ=255)
                                         caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                             >  7:319422‑M1/107‑147 (MQ=255)
                                          tCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGACACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgt                                                                                                          <  3:231850‑M2/149‑36 (MQ=255)
                                          accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                    <  6:226902‑M1/34‑1 (MQ=255)
                                          accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGc                                                                                                          <  1:90321‑M1/44‑1 (MQ=255)
                                                   aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 <  3:292112‑M2/149‑45 (MQ=255)
                                                   aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                 <  2:177202‑M2/149‑45 (MQ=255)
                                                   aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                                  >  8:308126‑M2/1‑105 (MQ=255)
                                                   aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                                  >  6:155616‑M2/1‑105 (MQ=255)
                                                   aCTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttaattttcagataa                                                                                                 <  2:259753‑M2/149‑45 (MQ=255)
                                                    cTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                                <  5:153458‑M2/149‑46 (MQ=255)
                                                       aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGCTGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                             <  4:323887‑M2/149‑49 (MQ=255)
                                                       aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                             >  4:292112‑M2/1‑101 (MQ=255)
                                                           acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAt                                                                                          <  6:254345‑M1/60‑1 (MQ=255)
                                                               gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                      <  6:228376‑M1/64‑1 (MQ=255)
                                                               gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtaggcagcatcaccATGATTGTGTTATCTATAATATTCACCCTTAAGACAATCAGGCCTACGCAACCCTGTCATTAag                                                                                      <  2:304211‑M1/64‑1 (MQ=255)
                                                                cccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                    <  6:322711‑M2/149‑58 (MQ=255)
                                                                cccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                    >  6:63934‑M2/1‑92 (MQ=255)
                                                                   gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAggagga                                                                                 >  6:305784‑M1/81‑149 (MQ=255)
                                                                   gCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                   >  3:323126/1‑147 (MQ=255)
                                                                    acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGgaggag                                                                                <  4:38209‑M1/70‑1 (MQ=255)
                                                                      agctgatagaaacagaagccactggagcacctcataaacacattcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGATAATCAGGGCTTCGCAACCCTGTCATTTAAGTGGAGCt                                                                              >  8:164039‑M1/78‑149 (MQ=255)
                                                                           atagaaacagaagccactggagcacctcaaaaacaccatcataaactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGTAGGAGCTATgtc                                                                         <  3:83794‑M1/77‑1 (MQ=255)
                                                                              gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt                                                                       <  8:220132‑M1/79‑1 (MQ=255)
                                                                               aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc                                                                      <  5:4143‑M1/80‑1 (MQ=255)
                                                                                    gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCa                                                                                                              >  2:218916‑M1/64‑103 (MQ=255)
                                                                                      agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                              >  6:78318‑M1/62‑149 (MQ=255)
                                                                                        gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgttagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                             >  2:94002‑M2/1‑68 (MQ=255)
                                                                                        gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                              <  5:147139‑M2/147‑80 (MQ=255)
                                                                                         ctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                                                           >  5:322762‑M2/1‑67 (MQ=255)
                                                                                         cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                              <  3:122948‑M1/88‑1 (MQ=255)
                                                                                              gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGAGTTATCTTTAATATTCACCCTGaa                                                                                                                      <  5:286312‑M1/32‑1 (MQ=255)
                                                                                               cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                     >  1:177202‑M2/1‑61 (MQ=255)
                                                                                               cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga                                                      <  1:262395‑M2/148‑88 (MQ=255)
                                                                                               agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa                                                     >  6:312491‑M1/53‑149 (MQ=255)
                                                                                                acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATGATATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTAGTCAACCCTACGAGAAGCCAg                                                    <  1:284029/149‑1 (MQ=255)
                                                                                                acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                    >  2:335000‑M2/1‑60 (MQ=255)
                                                                                                acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGg                                                                                                                                            <  5:160943‑M2/61‑2 (MQ=255)
                                                                                                   cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGTAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa                                                 >  5:228376‑M1/49‑149 (MQ=255)
                                                                                                    ggTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga                                                <  4:273739‑M2/149‑94 (MQ=255)
                                                                                                    ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                <  2:118948‑M1/102‑1 (MQ=255)
                                                                                                     tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                <  5:112903‑M1/102‑1 (MQ=255)
                                                                                                       aaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGa                                              <  3:60064‑M1/104‑1 (MQ=255)
                                                                                                        tctcCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                             >  3:313450‑M2/1‑52 (MQ=255)
                                                                                                           cctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcccccgattttgagaacgacagcgacttccgt                                         <  4:233561‑M2/149‑101 (MQ=255)
                                                                                                            ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcctccgattttgagaacgacagcgacttccgtc                                        <  1:254435‑M2/149‑102 (MQ=255)
                                                                                                            caccatcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                        >  5:306618‑M1/40‑149 (MQ=255)
                                                                                                               catcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                       <  5:267051‑M1/111‑1 (MQ=255)
                                                                                                                 ttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                   <  3:291721‑M2/149‑107 (MQ=255)
                                                                                                                 tcatacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAgg                                   >  2:89585‑M1/35‑149 (MQ=255)
                                                                                                                    tacactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTTAAGAGAATCAGGGATTAGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCAACGAGAAGCCCGTAAGGACACGTTGAAGGcc                                 <  1:322202‑M1/117‑1 (MQ=255)
                                                                                                                      cactaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGccata                              >  6:60488‑M1/30‑147 (MQ=255)
                                                                                                                       actaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                <  5:169902‑M1/118‑1 (MQ=255)
                                                                                                                       actaaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                <  1:111281‑M1/118‑1 (MQ=255)
                                                                                                                         taaatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGa                            <  8:87003‑M1/122‑1 (MQ=255)
                                                                                                                           aatcagtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATa                          >  1:38272‑M1/25‑148 (MQ=255)
                                                                                                                             tcagtaagtttgcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                       >  6:267051‑M1/23‑149 (MQ=255)
                                                                                                                                gtaagttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACt                     <  1:139378‑M1/129‑1 (MQ=255)
                                                                                                                                   agttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                  >  1:304211‑M1/17‑148 (MQ=255)
                                                                                                                                   aTCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  <  2:201617‑M2/148‑124 (MQ=255)
                                                                                                                                   aTCAAATCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgaatttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  >  2:282141‑M2/1‑25 (MQ=255)
                                                                                                                                   aTCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                  <  4:323126/148‑1 (MQ=255)
                                                                                                                                     ttggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCac               >  2:139378‑M1/15‑149 (MQ=255)
                                                                                                                                       ggcagcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta             <  4:88340‑M1/137‑1 (MQ=255)
                                                                                                                                       aaTCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                     <  8:116477‑M2/109‑89 (MQ=255)
                                                                                                                                       aaTCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                     >  7:116477‑M2/1‑21 (MQ=255)
                                                                                                                                         tCGTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc           >  2:329176‑M2/1‑19 (MQ=255)
                                                                                                                                           gcatcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa                                                     <  6:111961‑M1/97‑1 (MQ=255)
                                                                                                                                           gTTACGCGATGTTTGTGggtaatgactccaacttattgatagtgtcttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag         >  1:151078‑M2/1‑17 (MQ=255)
                                                                                                                                             atcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAg       <  6:179887‑M1/143‑1 (MQ=255)
                                                                                                                                              tcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc      <  7:216208‑M1/144‑1 (MQ=255)
                                                                                                                                              tcaccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc      <  7:134161‑M1/144‑1 (MQ=255)
                                                                                                                                               cgcgATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt      >  6:153458‑M2/1‑13 (MQ=255)
                                                                                                                                                gcgATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                            >  4:77984‑M2/1‑12 (MQ=255)
                                                                                                                                                 cgATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg   >  3:267322‑M2/1‑11 (MQ=255)
                                                                                                                                                 ccATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTg   >  6:169902‑M1/3‑149 (MQ=255)
                                                                                                                                                  gATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc  <  3:209405‑M2/149‑140 (MQ=255)
                                                                                                                                                  gATGTTTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc  >  3:273495‑M2/1‑10 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGC  >  NC_000913/1335612‑1335906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.