| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,335,761 | IS3 (–) +3 bp :: +TCA | 100% | intergenic (+303/‑68) | yciX → / → acnA | uncharacterized protein/aconitate hydratase 1; aconitase A |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 19 (0.170) +TCA |
19/244 | NT | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 1335761 = | 0 (0.000) | intergenic (+303/‑70) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
| * | ? | NC_000913 | = 1335763 | 0 (0.000) | 27 (0.240) | 23/246 | NT | 100% | intergenic (+305/‑68) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A |
| ? | NC_000913 | = 2171428 | NA (NA) | noncoding (1258/1258 nt) | IS3 | repeat region | |||||
GTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCA > NC_000913/1335613‑1335892 | tcagcaagcttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcag < 8:28448‑M2/1‑1 (MQ=255) caggaagctgcagggcttcactgcgaaattgaggtgactgctgtttactgggttttttactgggtgatactgtttttgtcatgtgagtgacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcag < 2:233517‑M2/1‑1 (MQ=255) cagcaagcttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcag < 1:376929‑M2/1‑1 (MQ=255) agcaagcttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGt < 7:302791‑M2/2‑1 (MQ=255) tGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgat < 3:436958‑M1/147‑5 (MQ=255) cttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttattcacttagccgcgtgtccactattgctgggtaagatcaGt < 1:272802‑M2/2‑1 (MQ=255) cttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttattcacttagccgcgtgtccactattgctgggtaagatcaGt > 2:272802‑M2/141‑142 (MQ=255) cttcagggcttcactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTgtgt > 6:83956‑M2/141‑148 (MQ=255) ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaa > 1:237903‑M1/1‑132 (MQ=255) ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaa > 7:58837‑M1/1‑132 (MQ=255) ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaa > 1:282155‑M1/1‑132 (MQ=255) cactgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAatat > 1:305863‑M2/130‑149 (MQ=255) ctgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATAtt > 8:207231‑M2/128‑148 (MQ=255) tgcgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGt > 8:221973‑M2/127‑128 (MQ=255) ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaata < 8:562051‑M1/146‑20 (MQ=255) cgaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCAc < 7:207231‑M2/24‑1 (MQ=255) gaaattcaggcgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCAccc > 5:514844‑M2/124‑149 (MQ=255) gCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatgga < 8:58837‑M1/149‑24 (MQ=255) aaCTCCTCTGGATCATTACTCACTGATCCTTGACACCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGATTCTCCTCTTTTATCAATATGGGTTGTTATCAAATCGTTACGCGATGATtcatactacacacgaaatatggaca > 5:135681‑M1/1‑122 (MQ=255) tctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCTTTACGAGCTGTTtgatcctccccacgtaatatggacccaggcct > 6:372852‑M1/1‑116 (MQ=255) cgaatgctgtttacggggttttttactggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt < 5:83956‑M2/36‑1 (MQ=255) gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagc > 6:358556‑M1/1‑112 (MQ=255) tACTCACTCATCCTTGACCCCGCTGCGGCGGGGTTTTCATTTCCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTCTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggccaaagcgagattc > 6:468630‑M1/1‑106 (MQ=255) cTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttt < 2:237903‑M1/149‑50 (MQ=255) tGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgtttt > 2:177809‑M1/1‑99 (MQ=255) cTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaagatggacacaggcctaagcggggttcttgttttcaaat > 7:199672‑M1/1‑94 (MQ=255) ctggttgatactgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa < 2:305863‑M2/61‑1 (MQ=255) aCCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgt < 5:358556‑M1/148‑59 (MQ=255) ccccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttc < 2:282155‑M1/149‑61 (MQ=255) ccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccg < 1:177809‑M1/149‑63 (MQ=255) ctgtttttgtcatgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa > 3:250764‑M2/79‑149 (MQ=255) gTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgc > 3:48107‑M1/1‑74 (MQ=255) ttGTCATTTGCTTTGCTTCAAGGGTTATCCTCTTTTATCTATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggtcacaggcctaagcgaggttcttgttttcaaattgttccggtcttaggcctcca < 4:48107‑M1/149‑77 (MQ=255) atgtgagtcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAc < 6:514844‑M2/81‑1 (MQ=255) tgctttgaCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGGTACGCGATGTTtgatcctccccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaac < 5:372852‑M1/148‑84 (MQ=255) gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactg > 5:552490‑M1/1‑64 (MQ=255) tcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTa > 8:545584‑M2/61‑120 (MQ=255) tcacctctgactgagagtttactcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTa < 7:545584‑M2/60‑1 (MQ=255) caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaata > 8:330042‑M1/1‑55 (MQ=255) caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaata < 7:330042‑M1/74‑20 (MQ=255) tctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatgga > 7:133014‑M1/1‑43 (MQ=255) tctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatgga < 8:133014‑M1/66‑24 (MQ=255) ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccgattgtaat > 6:341346‑M1/1‑41 (MQ=255) tcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc > 5:430620‑M2/39‑88 (MQ=255) tcacttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc < 6:430620‑M2/50‑1 (MQ=255) acttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc < 2:383188‑M2/78‑1 (MQ=255) acttagccgcgtgtccactattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc > 1:383188‑M2/37‑114 (MQ=255) aTCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccgattgtaatcacat > 5:51272‑M1/1‑37 (MQ=255) gttgttATCAAATCGTTACGCGATTTTtgatcctaccgacgtaatatggacacaggcctaatcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccgattgtaatcacattcgatataa < 5:468630‑M1/148‑122 (MQ=255) ctattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa > 7:540180‑M2/20‑98 (MQ=255) ctattgctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa < 8:540180‑M2/79‑1 (MQ=255) tCAAATCGTTACGCGATGTTtgatcctacccacgtaatatggacacaggcctaagcgaggttcttgttttcaaattgttccggactgaggccgccacaccaactgtgccgccgccaccgattgtaatcacattcgatataattaaacac > 2:13729‑M1/1‑20 (MQ=255) ctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc > 4:74684‑M2/14‑143 (MQ=255) ctgggtaagatcaGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc < 3:74684‑M2/130‑1 (MQ=255) | GTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCA > NC_000913/1335613‑1335892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |