BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,335,075	Δ714 bp		ymiA–yciX	ymiA, yciX

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1335075	1335788	714	114 [0]	[1] 113	ymiA–yciX	ymiA,yciX

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1335074	0 (0.000)	112 (1.260)	82/278	0.1	99.6%	intergenic (+245/‑50)	cysB/ymiA	N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein
*	?	NC_000913	1335789 =	1 (0.010)	112 (1.260)	82/278	0.1	99.6%	intergenic (+331/‑42)	yciX/acnA	uncharacterized protein/aconitate hydratase 1; aconitase A

Only 100 of 114 total aligned reads displayed.

CCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCT  >  NC_000913/1334926‑1335218

ccTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTc                                                                                                                                                  <  5:249863/149‑1 (MQ=255)

ccTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTc                                                                                                                                                  <  5:346698/149‑1 (MQ=255)

  tCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaa                                                                                                                                                >  3:201636‑M1/1‑147 (MQ=255)

    atatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaaga                                                                                                                                              <  1:350601‑M1/149‑5 (MQ=255)

    atatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaa                                                                                                                                                <  7:61160‑M1/147‑3 (MQ=255)

    atatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaa                                                                                                                                                <  2:198361‑M1/147‑3 (MQ=255)

     tatTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaa                                                                                                                                                >  7:217870‑M1/1‑144 (MQ=255)

      atTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagag                                                                                                                                             >  2:261294‑M1/1‑143 (MQ=255)

               gTAAATTCCCTGTAAAGTAGTGTCTAATTACACGCCTCGCAAACTCCAGTTATCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggct                                                                                                                                   >  8:240181‑M1/1‑134 (MQ=255)

               gTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggct                                                                                                                                   >  1:191971‑M1/1‑134 (MQ=255)

               gTAAATTACCTGTAAAGTAGTGTCTAATTACCCGACTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCGGGATTTTTGACTAAAGTTTCaagagaatcagggct                                                                                                                                   <  6:120777‑M1/149‑16 (MQ=255)

                  aaTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttc                                                                                                                                 <  6:193906‑M1/148‑18 (MQ=255)

                  aaTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttc                                                                                                                                 <  6:128976‑M1/148‑18 (MQ=255)

                      aCCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaac                                                                                                                            >  1:276760‑M1/1‑127 (MQ=255)

                       ccTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaacc                                                                                                                           >  5:120682‑M1/1‑126 (MQ=255)

                        cTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccc                                                                                                                          >  4:101665‑M1/1‑125 (MQ=255)

                         tGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagaga                                                                                                                                            <  5:67186‑M1/130‑7 (MQ=255)

                         tGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagaga                                                                                                                                            >  6:67186‑M1/1‑124 (MQ=255)

                          gTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctg                                                                                                                        >  2:195105‑M1/1‑123 (MQ=255)

                          gTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaa                                                                                                                             >  8:301914‑M1/1‑123 (MQ=255)

                          gTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaa                                                                                                                             <  7:301914‑M1/144‑22 (MQ=255)

                           tAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgt                                                                                                                       <  1:261294‑M1/149‑28 (MQ=255)

                           tAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgt                                                                                                                       <  5:47466‑M1/149‑28 (MQ=255)

                            aaaGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgt                                                                                                                       <  3:278186‑M1/148‑28 (MQ=255)

                                  gtgtCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaa                                                                                                                 <  4:276403‑M1/148‑34 (MQ=255)

                                  gtgtCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcatt                                                                                                                   >  2:16015‑M1/1‑115 (MQ=255)

                                  gtgtCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcatt                                                                                                                   <  1:16015‑M1/146‑32 (MQ=255)

                                     tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             >  1:52620‑M1/1‑112 (MQ=255)

                                     tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaagga                                                                                                              <  5:157168‑M1/148‑37 (MQ=255)

                                     tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgt                                                                                                                       <  4:70534‑M1/139‑28 (MQ=255)

                                     tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgt                                                                                                                       >  3:70534‑M1/1‑112 (MQ=255)

                                       tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             >  4:243218‑M1/1‑110 (MQ=255)

                                         aTTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCACAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGGTTCaagagaatcagggcttcgcaaccctgtcattaaggagga                                                                                                           <  8:266143‑M1/147‑40 (MQ=255)

                                         aTTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggagg                                                                                                            <  7:330987‑M1/146‑39 (MQ=255)

                                         aTTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggagg                                                                                                            <  8:217870‑M1/146‑39 (MQ=255)

                                               cGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtc                                                                                                   <  4:201636‑M1/149‑48 (MQ=255)

                                                gCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagct                                                                                                        <  7:58248‑M1/143‑43 (MQ=255)

                                                   tCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc                                                                                                >  8:171208‑M1/1‑98 (MQ=255)

                                                    cGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             <  7:363713‑M1/134‑38 (MQ=255)

                                                    cGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             >  8:363713‑M1/1‑97 (MQ=255)

                                                     gCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtca                                                                                               <  5:362453‑M1/147‑52 (MQ=255)

                                                     gCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATGCGCTGGATTTTTTACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtca                                                                                               <  7:265377‑M1/147‑52 (MQ=255)

                                                           tCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcacccctac                                                                                        >  8:121580‑M1/1‑90 (MQ=255)

                                                           tCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctac                                                                                        >  1:221307‑M1/1‑90 (MQ=255)

                                                           tCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTAGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagatatgtcgtcaaccat                                                                                          >  3:19895‑M1/1‑90 (MQ=255)

                                                                 tttCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagc                                                                                 >  7:196500‑M1/1‑84 (MQ=255)

                                                                    cAAATATCTATTTCAGGTCAAAAGAATGAATTATTCACTGGAGACGATTCGTAATTTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaatgaggagctatgtcgtcaacactacgagaagcca                                                                               <  1:38631‑M1/148‑68 (MQ=255)

                                                                     aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagt                                                                             <  7:240181‑M1/149‑70 (MQ=255)

                                                                      aaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagt                                                                             >  8:313490‑M1/1‑79 (MQ=255)

                                                                       atatCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctgtgtcgtcaaccctacgagaagccagtaa                                                                           <  6:120682‑M1/149‑72 (MQ=255)

                                                                              tttCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctctgtcgtcaaccctacgagaagccagtaagga                                                                        <  6:11282‑M1/145‑75 (MQ=255)

                                                                              tttCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacg                                                                    >  4:211179‑M1/1‑71 (MQ=255)

                                                                              tttCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaagga                                                                        <  1:195105‑M1/145‑75 (MQ=255)

                                                                                 cAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgtt                                                                  <  2:225008‑M1/148‑81 (MQ=255)

                                                                                    gTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcag                                                              >  2:18067‑M1/1‑65 (MQ=255)

                                                                                    gTCAAAAGATTGAATTATTCACTGGACACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcag                                                              <  7:176860‑M1/149‑85 (MQ=255)

                                                                                       aaaaGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggc                                                            >  2:2964‑M1/1‑62 (MQ=255)

                                                                                         aaGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaa                                                                                   >  4:279137‑M1/1‑60 (MQ=255)

                                                                                         aaGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaa                                                                                   <  3:279137‑M1/123‑64 (MQ=255)

                                                                                            aTTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaaga                                                      <  1:2964‑M1/149‑93 (MQ=255)

                                                                                            aTTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggcca                                                          >  7:170870‑M1/1‑57 (MQ=255)

                                                                                               gAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagata                                                    >  7:191421‑M1/1‑54 (MQ=255)

                                                                                                  ttattCACTGGAGACGAATCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacga                                                                                      >  4:322115‑M1/1‑51 (MQ=255)

                                                                                                  ttattCACTGGAGACGAATCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacga                                                                                      <  3:322115‑M1/111‑61 (MQ=255)

                                                                                                     ttCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaactta                                             <  3:101665‑M1/149‑102 (MQ=255)

                                                                                                        aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttacca                                          <  1:207224‑M1/149‑105 (MQ=255)

                                                                                                        aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttacca                                          >  1:222876‑M1/1‑45 (MQ=255)

                                                                                                        aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttac                                            <  7:237714‑M1/147‑103 (MQ=255)

                                                                                                        aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttac                                            >  8:243611‑M1/1‑45 (MQ=255)

                                                                                                        aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttac                                            <  7:243611‑M1/147‑103 (MQ=255)

                                                                                                            gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactac                                      <  3:243218‑M1/149‑109 (MQ=255)

                                                                                                            gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccacta                                       >  1:212717‑M1/1‑41 (MQ=255)

                                                                                                            gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccacta                                       <  2:212717‑M1/148‑108 (MQ=255)

                                                                                                            gagaCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggattcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactac                                      <  8:196500‑M1/149‑109 (MQ=255)

                                                                                                               aCGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactacta                                    >  3:124675‑M1/1‑38 (MQ=255)

                                                                                                                cGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactaca                                  <  2:191971‑M1/149‑113 (MQ=255)

                                                                                                                cGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactaca                                  <  3:321556‑M1/149‑113 (MQ=255)

                                                                                                                 gATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacag                                 >  5:259764‑M1/1‑36 (MQ=255)

                                                                                                                 gATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtca                                                                                               <  7:196304‑M1/87‑52 (MQ=255)

                                                                                                                 gATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtca                                                                                               >  8:196304‑M1/1‑36 (MQ=255)

                                                                                                                  aTTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagc                                <  2:222876‑M1/149‑115 (MQ=255)

                                                                                                                    tCGTAAATTCGCTGGATTTTTGACAAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcct                              >  2:250134‑M1/1‑33 (MQ=255)

                                                                                                                      gTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             <  3:185169‑M1/68‑38 (MQ=255)

                                                                                                                      gTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggag                                                                                                             >  4:185169‑M1/1‑31 (MQ=255)

                                                                                                                      gTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcaggg                                                                                                                                     <  6:3534‑M1/44‑14 (MQ=255)

                                                                                                                      gTAAATTCGCTGGATTTTTGACTAAAGTTTCaagagaatcaggg                                                                                                                                     >  5:3534‑M1/1‑31 (MQ=255)

                                                                                                                           ttCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgctt                       <  7:171208‑M1/149‑124 (MQ=255)

                                                                                                                           ttCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgc                         <  1:109705‑M1/147‑122 (MQ=255)

                                                                                                                           ttCGCTGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgc                         >  2:109705‑M1/1‑26 (MQ=255)

                                                                                                                                tGGATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgc                  >  7:124280‑M1/1‑21 (MQ=255)

                                                                                                                                  gATTTTTGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgct                 <  8:170870‑M1/148‑130 (MQ=255)

                                                                                                                                       ttGACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatc            <  8:178316‑M1/148‑135 (MQ=255)

                                                                                                                                         gACTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcac          <  8:257164‑M1/148‑137 (MQ=255)

                                                                                                                                          aCTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcag                                                              <  1:355968‑M1/95‑85 (MQ=255)

                                                                                                                                          aCTAAAGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcag                                                              >  2:355968‑M1/1‑11 (MQ=255)

                                                                                                                                              aaGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaagcctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcactgtgcg    <  2:52620‑M1/149‑143 (MQ=255)

                                                                                                                                              aaGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcactgggcg    <  2:276760‑M1/149‑143 (MQ=255)

                                                                                                                                              aaGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcactggg      <  3:211179‑M1/147‑141 (MQ=255)

                                                                                                                                               aGTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcactgggcga   <  6:378538‑M1/149‑144 (MQ=255)

                                                                                                                                                gTTTCaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactacagcctgccgcttgctgctaaatcactgggcgat  <  8:191421‑M1/149‑145 (MQ=255)

CCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCT  >  NC_000913/1334926‑1335218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`