Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,335,762 IS5 (–) +4 bp intergenic (+304/‑66) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1335762 =0 (0.000)55 (1.560) 40/240 0.1 100% intergenic (+304/‑69) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 13357650 (0.000)42 (1.190) 37/240 0.1 100% intergenic (+307/‑66) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGC  >  NC_000913/1335617‑1335906
                                                                                                                                                    |                                                                                                                                             
gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtg                                                                                                                                               <  4:7599‑M1/4‑1 (MQ=255)
   aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTgtgt                                                                                                                                            <  5:177361‑M1/7‑1 (MQ=255)
    tGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTTATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGg                                                                                                                                              <  7:76006‑M1/146‑2 (MQ=255)
    agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGtt                                                                                                                                           >  6:177361‑M1/142‑149 (MQ=255)
      tCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaagg                                                                                                                                         >  1:119815‑M1/1‑143 (MQ=255)
              ttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTaa                                                                                                                                   >  3:7599‑M1/132‑147 (MQ=255)
               tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAatat                                                                                                                                <  1:200370‑M1/19‑1 (MQ=255)
                   gggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                            >  2:69384‑M1/1‑130 (MQ=255)
                    ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                            <  2:119815‑M1/148‑20 (MQ=255)
                    ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcg                                                                                                                             <  4:26527‑M1/147‑19 (MQ=255)
                     gCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgggg                                                                                                                          <  1:69384‑M1/149‑22 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTaa                                                                                                                                   >  1:134654‑M1/120‑135 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTaa                                                                                                                                   <  2:134654‑M1/16‑1 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                      >  2:200370‑M1/120‑148 (MQ=255)
                            tcctcTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattct                                                                                                                   >  5:109850‑M1/1‑121 (MQ=255)
                                 ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt                                                                                                                <  7:36550‑M1/35‑1 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgtg                                                                                                                                             >  3:159490‑M1/105‑110 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCg                                                                                                      <  7:137059‑M1/45‑1 (MQ=255)
                                         gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctcttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgtg                                                                                                                                             <  4:159490‑M1/6‑1 (MQ=255)
                                               actgtcgtctaaggtaagtagatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc                                                                                                 >  1:139063‑M1/99‑148 (MQ=255)
                                                  aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                             <  3:96721‑M1/149‑51 (MQ=255)
                                                   tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                            >  8:137059‑M1/95‑149 (MQ=255)
                                                        aacCCCGCCGCAGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcg                                                                                                              >  7:4950‑M1/2‑93 (MQ=255)
                                                        aacCCCGCCGCAGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcg                                                                                                              <  8:4950‑M1/125‑34 (MQ=255)
                                                         aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                      >  8:36550‑M1/89‑149 (MQ=255)
                                                             taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                   <  2:37783‑M1/64‑1 (MQ=255)
                                                                  cggcggGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                               <  6:109850‑M1/147‑65 (MQ=255)
                                                                   gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa                                                                             >  1:37783‑M1/79‑148 (MQ=255)
                                                                        ggTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattc                                                                                                                    <  7:99629‑M1/104‑28 (MQ=255)
                                                                        ggTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTAACAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattc                                                                                                                    >  8:99629‑M1/1‑77 (MQ=255)
                                                                         tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                                     <  3:11098‑M1/62‑1 (MQ=255)
                                                                         tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                                     >  4:11098‑M1/73‑134 (MQ=255)
                                                                         gTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt                                                                      >  5:161020‑M1/1‑76 (MQ=255)
                                                                           atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgt                                                                                                                                              >  1:133523‑M1/71‑75 (MQ=255)
                                                                           atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTtgt                                                                                                                                              <  2:133523‑M1/5‑1 (MQ=255)
                                                                            gTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                   >  5:85077‑M1/1‑73 (MQ=255)
                                                                                     tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                             >  6:69468‑M1/1‑64 (MQ=255)
                                                                                     tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                             <  5:69468‑M1/98‑35 (MQ=255)
                                                                                         ccACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                      >  7:20250‑M1/1‑60 (MQ=255)
                                                                                           tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc                                                                                                <  3:18864‑M1/51‑1 (MQ=255)
                                                                                           tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc                                                                                                >  4:18864‑M1/55‑105 (MQ=255)
                                                                                           acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                    >  1:103261‑M1/1‑58 (MQ=255)
                                                                                            atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                                     >  6:39376‑M1/54‑115 (MQ=255)
                                                                                            atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                                     <  5:39376‑M1/62‑1 (MQ=255)
                                                                                             tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                            <  2:198600‑M1/55‑1 (MQ=255)
                                                                                             tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                            >  7:113739‑M1/53‑107 (MQ=255)
                                                                                             tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                            >  1:198600‑M1/53‑107 (MQ=255)
                                                                                             tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                            <  8:113739‑M1/55‑1 (MQ=255)
                                                                                                gTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                               <  2:103261‑M1/149‑97 (MQ=255)
                                                                                                     tcctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                          >  8:56386‑M1/1‑48 (MQ=255)
                                                                                                     tcctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                          >  1:182548‑M1/1‑48 (MQ=255)
                                                                                                      cctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtaatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                         >  3:100953‑M1/1‑47 (MQ=255)
                                                                                                       ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                         >  2:53157‑M1/1‑46 (MQ=255)
                                                                                                       ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                          <  7:56386‑M1/147‑102 (MQ=255)
                                                                                                          ttttATAAATTTGGGTTGTTATCAAATCTTTACGCGATGTTTGtgaaggtgagaataagaggggaaattcttctcggatgaatcattcttttcatttcttcatgtttgagccgattttttctcccgtaaattacttgaatcagactatt                                     >  8:39868‑M1/1‑43 (MQ=255)
                                                                                                           aaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTc                                                                                                       >  5:126559‑M1/39‑82 (MQ=255)
                                                                                                           aaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTc                                                                                                       <  6:126559‑M1/44‑1 (MQ=255)
                                                                                                             tATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                   >  2:25530‑M1/1‑40 (MQ=255)
                                                                                                             tATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                   <  1:25530‑M1/100‑61 (MQ=255)
                                                                                                             tATCAATTTGGGGTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                   <  8:20250‑M1/148‑109 (MQ=255)
                                                                                                              aTCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                        >  3:11742‑M1/1‑39 (MQ=255)
                                                                                                              aTCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                        <  4:11742‑M1/126‑88 (MQ=255)
                                                                                                                     tcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                <  1:25147‑M1/99‑1 (MQ=255)
                                                                                                                     tcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                >  2:25147‑M1/29‑127 (MQ=255)
                                                                                                                       atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                    <  2:9010‑M1/31‑1 (MQ=255)
                                                                                                                       atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                    >  1:9010‑M1/27‑57 (MQ=255)
                                                                                                                       atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCaa                                                                                                   <  8:87205‑M1/48‑1 (MQ=255)
                                                                                                                       atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCaa                                                                                                   >  7:87205‑M1/27‑74 (MQ=255)
                                                                                                                       atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGTGGAGCTATGTCGTCAACCCTACGAGAAGCCACTAAGGACACGTTGAAGGCCAAAGATaa                         <  3:122071‑M1/122‑1 (MQ=255)
                                                                                                                           gttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgc                     <  1:53157‑M1/148‑123 (MQ=255)
                                                                                                                            ttATCAAATCGTTACGCGATGTTTgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                    >  4:26862‑M1/1‑25 (MQ=255)
                                                                                                                              aTCAAATCGTTACGCTATGTTTTggaatgtgcgaataatcgggtaaattcttatcttctgactcagtcatttcatttcttcatttttgagacgattttttctcccgtaaatgccttgaatcagcctatttagacagtttcttcgccat                  <  7:39868‑M1/148‑126 (MQ=255)
                                                                                                                              aTCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                       >  3:117517‑M1/1‑23 (MQ=255)
                                                                                                                              aTCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                       <  4:117517‑M1/111‑89 (MQ=255)
                                                                                                                                 cttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCac               <  2:178948‑M1/132‑1 (MQ=255)
                                                                                                                                  ttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc                                                                         <  6:63566‑M1/74‑1 (MQ=255)
                                                                                                                                  ttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc                                                                         >  5:63566‑M1/16‑89 (MQ=255)
                                                                                                                                  ttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta             <  4:48031‑M1/134‑1 (MQ=255)
                                                                                                                                  aaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                   >  5:107470‑M1/1‑19 (MQ=255)
                                                                                                                                  aaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattta                                   <  6:107470‑M1/127‑109 (MQ=255)
                                                                                                                                     ttcgcaccttccTTTATGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                      >  1:166848‑M1/13‑73 (MQ=255)
                                                                                                                                     ttcgcaccttccTTTATGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                      <  2:166848‑M1/61‑1 (MQ=255)
                                                                                                                                      gTTACGCGATGTTTgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt           <  3:26862‑M1/148‑134 (MQ=255)
                                                                                                                                       cgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACtactac         >  1:178948‑M1/11‑148 (MQ=255)
                                                                                                                                           gcgATGTTTGggaaggtgcgaataagcggggaaattcttgtcggctgactcagtcatttcatttctt                                                                                      <  8:71350‑M1/67‑58 (MQ=255)
                                                                                                                                               ccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGc  >  3:48031‑M1/3‑147 (MQ=255)
                                                                                                                                                cTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGt                                         <  7:54981‑M1/106‑1 (MQ=255)
                                                                                                                                                cTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGt                                         >  8:54981‑M1/2‑107 (MQ=255)
                                                                                                                                                  ttGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                                       <  6:12669/91‑1 (MQ=255)
                                                                                                                                                  ttGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                                       >  5:12669/1‑91 (MQ=255)
                                                                                                                                                    gtgtTGTCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                       >  4:99981/1‑105 (MQ=255)
                                                                                                                                                    gtgtTGTCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                       <  3:99981/105‑1 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                    >  1:115204‑M1/1‑1 (MQ=255)
                                                                                                                                                    gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                    <  2:115204‑M1/124‑124 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGC  >  NC_000913/1335617‑1335906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.