New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	62126 =	69 (1.280)	4 (0.080)	4/250	NT	6.1%	coding (1139/2907 nt)	rapA	RNA polymerase remodeling/recycling factor ATPase; RNA polymerase‑associated, ATP‑dependent RNA translocase
	?	NC_000913	62151 =	57 (1.100)					coding (1114/2907 nt)	rapA	RNA polymerase remodeling/recycling factor ATPase; RNA polymerase‑associated, ATP‑dependent RNA translocase

GGGAATCCTTTCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTC  >  NC_000913/61979‑62271                                                                                                                                                    |                                                                                                                                                  gggAATCCTTTCACACCGTTACGCGTGTTACGGAACAGCACGCGTCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTg                                                                                                                                                  >  4:62006/1‑149 (MQ=255) gggAATCCTTTCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTg                                                                                                                                                  >  8:133544/1‑149 (MQ=255)  ccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGc                                                                                                                                                 >  1:4323‑M1/147‑149 (MQ=255)  ccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGc                                                                                                                                                 <  7:241099‑M1/3‑1 (MQ=255)  ccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGc                                                                                                                                                 <  3:134886‑M1/3‑1 (MQ=255)    acttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgccgaactgaacaTGCTc                                                                                                                                               <  3:26745‑M1/5‑1 (MQ=255)    acttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTc                                                                                                                                               >  6:226171‑M1/145‑149 (MQ=255)     cttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCg                                                                                                                                              <  5:235322‑M1/6‑1 (MQ=255)     cttcgcccgtctgcgtctgctggacccgaaccggttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCg                                                                                                                                              >  1:180398‑M1/144‑149 (MQ=255)         tttCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGa                                                                                                                                          >  8:43251/1‑149 (MQ=255)         tttCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGa                                                                                                                                          >  1:235609/1‑149 (MQ=255)           tCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGa                                                                                                                                          <  7:43251/147‑1 (MQ=255)             acacCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGGGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatcat                                                                                                                                      >  2:41660/1‑149 (MQ=255)              cacCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatcatc                                                                                                                                     >  4:193149/1‑149 (MQ=255)               acCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatc                                                                                                                                        >  8:223327/1‑145 (MQ=255)               acCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatc                                                                                                                                        <  7:223327/145‑1 (MQ=255)               acCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCAtct                                                                                                                                    >  5:105536/1‑149 (MQ=255)                  gTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGc                                                                                                                                 <  8:22195/149‑1 (MQ=255)                    tctgctggacccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCGCCGATCATCTCGCCg                                                                                                                               <  6:101317‑M1/21‑1 (MQ=255)                       gcgTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGc                                                                                                                            <  5:26259/149‑1 (MQ=255)                          tgtTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATg                                                                                                                         >  4:26745/1‑149 (MQ=255)                           gtTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGcc                                                                                                                                >  8:186390/1‑141 (MQ=255)                           gtTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGcc                                                                                                                                <  7:186390/141‑1 (MQ=255)                            ttACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGtt                                                                                                                       <  6:105536/149‑1 (MQ=255)                             cccgaaccgtttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgtggccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCGCCGATCATCTCGCCGAGCATGTTc                                                                                                                      >  5:101317‑M1/120‑149 (MQ=255)                                  aaCAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTc                                                                                                                 >  6:233665/1‑149 (MQ=255)                                      tttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacat                                                                                                                                                   >  6:138392‑M1/111‑111 (MQ=255)                                      tttccacgattttgcgcagttcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacat                                                                                                                                                   <  5:138392‑M1/1‑1 (MQ=255)                                         cgcgGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTg                                                                                                          <  5:219172/149‑1 (MQ=255)                                            ggCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTc                                                                                                       <  8:192371/149‑1 (MQ=255)                                                    ccGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGt                                                                                                >  8:241099/1‑148 (MQ=255)                                                      gTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTAc                                                                                             >  4:219836/1‑149 (MQ=255)                                                       tGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTAcc                                                                                            <  3:193149/149‑1 (MQ=255)                                                         gCGATCCATCAGCATCGAAACCAGCTACTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCt                                                                                           <  8:225721/148‑1 (MQ=255)                                                          cGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGGCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTGCAGTTCGTCATTGCTCAGTTTGTTACCTGc                                                                                         <  6:83997/149‑1 (MQ=255)                                                             tCCATCAGCATCGAAACCAGCTCCTGTCGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCcag                                                                                      <  8:4709/149‑1 (MQ=255)                                                                     cATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATgg                                                                              >  4:5049/1‑149 (MQ=255)                                                                      aTCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATgg                                                                              >  4:79860/1‑148 (MQ=255)                                                                       tCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGc                                                                             >  2:4893/1‑148 (MQ=255)                                                                        aaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTg                                                                                                          >  3:175432‑M1/77‑118 (MQ=255)                                                                        aaaaattatcgtccggttgcggacgccgttgccatgctgctggcaggtaacaaactgagcaatgacgaactgaacaTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTg                                                                                                          <  4:175432‑M1/42‑1 (MQ=255)                                                                          aaaCCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACg                                                                         >  6:235322/1‑149 (MQ=255)                                                                              cAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACGGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCt                                                                                           <  4:230635/127‑1 (MQ=255)                                                                              cAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACGGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCt                                                                                           >  3:230635/1‑127 (MQ=255)                                                                                   ccTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGc                                                                 >  4:86541/1‑148 (MQ=255)                                                                                    cTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatcat                                                                                                                                      <  5:116839/78‑1 (MQ=255)                                                                                    cTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGatcat                                                                                                                                      >  6:116839/1‑78 (MQ=255)                                                                                    cTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCaa                                                               >  5:91983/1‑149 (MQ=255)                                                                                     tGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACg                                                                         <  5:138695/138‑1 (MQ=255)                                                                                     tGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACg                                                                         >  6:138695/1‑138 (MQ=255)                                                                                      gACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAAcc                                                             >  5:10318/1‑149 (MQ=255)                                                                                            cgcTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGa                                                       >  6:47856/1‑149 (MQ=255)                                                                                               tctGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATaa                                                    >  4:226966/1‑149 (MQ=255)                                                                                               tctGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATaa                                                    >  8:217255/1‑149 (MQ=255)                                                                                                   ggCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAAtttt                                                >  6:107084/1‑149 (MQ=255)                                                                                                   ggCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAAt                                                   <  5:233665/146‑1 (MQ=255)                                                                                                           cgctgtcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTg                                            <  7:217255/145‑1 (MQ=255)                                                                                                           cgctgtcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTg                                            <  2:190914/145‑1 (MQ=255)                                                                                                            gctgtcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGctct                                        <  6:10318/148‑1 (MQ=255)                                                                                                                tcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAAc                                   >  6:86946/1‑149 (MQ=255)                                                                                                                tcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAAc                                   >  7:152865/1‑149 (MQ=255)                                                                                                                tcgctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGATACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAAc                                   >  3:23640/1‑149 (MQ=255)                                                                                                                  gctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGtt                                                                                               >  3:2187/1‑87 (MQ=255)                                                                                                                  gctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGtt                                                                                               <  4:2187/87‑1 (MQ=255)                                                                                                                  gctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACg                                  >  1:206292/1‑148 (MQ=255)                                                                                                                  gctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAA‑TTTTCTGCTCTTCAACGaa                                >  1:6704/1‑149 (MQ=255)                                                                                                                  gctgtTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGATCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATCGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACg                                  >  1:8951/1‑148 (MQ=255)                                                                                                                      tttGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAAc                               <  3:86541/147‑1 (MQ=255)                                                                                                                      tttGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAA‑TTTTCTGCTCTTCAACGAACTgc                            <  2:6704/149‑1 (MQ=255)                                                                                                                          ctgcctgcAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTgcgc                          <  3:79860/148‑1 (MQ=255)                                                                                                                             cctgcAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCaaaa                      >  7:209628/1‑149 (MQ=255)                                                                                                                                  aaCAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg                 <  7:133544/149‑1 (MQ=255)                                                                                                                                  aaCAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg                 >  6:24646/1‑149 (MQ=255)                                                                                                                                  aaCAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg                 >  5:79594/1‑149 (MQ=255)                                                                                                                                   aCAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTg                 >  5:125247/1‑148 (MQ=255)                                                                                                                                      gCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGaaa             <  6:91983/149‑1 (MQ=255)                                                                                                                                        ggCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACg           >  4:134886/1‑149 (MQ=255)                                                                                                                                             gATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGAt                                                      >  5:206042/1‑101 (MQ=255)                                                                                                                                             gATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGAt                                                      <  6:206042/101‑1 (MQ=255)                                                                                                                                             gATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTc       <  8:209628/148‑1 (MQ=255)                                                                                                                                             gATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTc       <  3:5049/148‑1 (MQ=255)                                                                                                                                             gATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTc       <  1:4893/148‑1 (MQ=255)                                                                                                                                              atatCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCgg     <  3:226966/149‑1 (MQ=255)                                                                                                                                              atatCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCgg     <  2:235609/149‑1 (MQ=255)                                                                                                                                                 tCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTc  <  8:152865/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGGAATCCTTTCACACCGTTACGCGTGTTACGGAACAGCACGCGGCTGGTGCCGTGGCGATCCATCAGCATCGAAACCAGCTCCTGACGGGCGCTCTGGGCATCTTCGCTGTCGCTGTTTGCTGCCTGCAACAGCGGCTCGATATCCTGCTCGCCGATCATCTCGCCGAGCATGTTCAGTTCGTCATTGCTCAGTTTGTTACCTGCCAGCAGCATGGCAACGGCGTCCGCAACCGGACGATAATTTTTCTGCTCTTCAACGAACTGCGCAAAATCGTGGAAACGGTTCGGGTC  >  NC_000913/61979‑62271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.