Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 523,077 IS2 (+) +5 bp 25.9% intergenic (+247/‑180) ybbP → / → rhsD putative ABC transporter permease/Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381260 =NA (NA)20 (0.230) 19/256 NT 19.4% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 523081 80 (0.960)intergenic (+251/‑180) ybbP/rhsD putative ABC transporter permease/Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
* ? NC_000913 523077 =80 (0.950)36 (0.410) 32/258 NT 30.2% intergenic (+247/‑184) ybbP/rhsD putative ABC transporter permease/Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 154 total aligned reads displayed.

TATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAA  >  NC_000913/522929‑523223
                                                                                                                                                    |                                                                                                                                                  
caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                                                                    >  8:383445‑M1/149‑149 (MQ=255)
 aaagaaccttgcagcggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttggaatggggtaagtgataacagctgtctggaaatataggggcaaatccaa                                                                                                                                                    <  3:284524‑M1/1‑1 (MQ=255)
 aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAt                                                                                                                                                   >  1:20508‑M1/148‑149 (MQ=255)
 aTCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCAt                                                                                                                                                   >  6:349983/1‑149 (MQ=255)
  tCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCAt                                                                                                                                                   <  7:40408/148‑1 (MQ=255)
  tCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATc                                                                                                                                                  >  4:374096/1‑149 (MQ=255)
  aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAt                                                                                                                                                   <  3:60236‑M1/2‑1 (MQ=255)
     tacctttcataggcgttcgagcattataacgaatggcatccgcagagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCtgt                                                                                                                                               >  6:50722‑M1/144‑149 (MQ=255)
     aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCtgt                                                                                                                                               <  2:62869‑M1/6‑1 (MQ=255)
     aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCtgt                                                                                                                                               >  5:363765‑M1/144‑149 (MQ=255)
            gCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactg                                                                                                                                         >  1:205853‑M2/1‑141 (MQ=255)
             cTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTaaaaa                                                                                                                                       >  6:145366/1‑149 (MQ=255)
             cTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTaaaaa                                                                                                                                       <  4:181568/149‑1 (MQ=255)
             cTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTaaaaa                                                                                                                                       <  7:80636/149‑1 (MQ=255)
             agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTaaaaa                                                                                                                                       <  8:191043‑M1/14‑1 (MQ=255)
              tGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAAt                                                                                                                                      >  3:123287/1‑149 (MQ=255)
              tGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATATGTGCTAAAAAt                                                                                                                                      >  7:321911/1‑149 (MQ=255)
                atatTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGt                                                                                                                                    >  8:158215/1‑149 (MQ=255)
                atatTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGCATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAAt                                                                                                                                      <  3:61133/147‑1 (MQ=255)
                   ttAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTa                                                                                                                                  <  1:115116/148‑1 (MQ=255)
                     aaTCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGtt                                                                                                                               >  2:277751/1‑149 (MQ=255)
                      aTCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccct                                                                                                                                  <  4:236674‑M2/145‑15 (MQ=255)
                      aTCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccct                                                                                                                                  >  3:236674‑M2/1‑131 (MQ=255)
                       gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGttt                                                                                                                              <  1:231196‑M1/23‑1 (MQ=255)
                       gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGttt                                                                                                                              >  1:62869‑M1/126‑148 (MQ=255)
                                gTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAatat                                                                                                                    >  7:235129/1‑149 (MQ=255)
                                 acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgtgcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATAtt                                                                                                                   >  2:210050‑M1/116‑149 (MQ=255)
                                     gTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGaaa                                                                                                               <  5:145366/149‑1 (MQ=255)
                                          atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGAc                                                                                                          >  4:246463‑M1/107‑149 (MQ=255)
                                            gATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcact                                                                                                         >  2:387783‑M2/1‑109 (MQ=255)
                                              ttttAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTg                                                                                                       >  8:255981/1‑148 (MQ=255)
                                                ttAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGtaa                                                                                                    >  1:256912/1‑149 (MQ=255)
                                                  agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGtaat                                                                                                   <  6:1104‑M1/50‑1 (MQ=255)
                                                    atatAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAAc                                                                                                <  7:102650/149‑1 (MQ=255)
                                                     tataGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGtaataa                                                                                                 >  6:128801/1‑147 (MQ=255)
                                                     tataGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGAACTGtaataa                                                                                                 >  1:272430/1‑147 (MQ=255)
                                                       taGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGATAGTGACCTGTAATAACAg                                                                                              <  2:227881/148‑1 (MQ=255)
                                                        aGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtga                                                                                              <  5:308534‑M2/147‑51 (MQ=255)
                                                         gCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAgtt                                                                                            <  8:321911/148‑1 (MQ=255)
                                                            cTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                        <  4:165895‑M2/149‑57 (MQ=255)
                                                             tACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATCGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                        <  2:412132‑M2/148‑57 (MQ=255)
                                                              aCAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                                                                       <  3:100584‑M2/148‑58 (MQ=255)
                                                              aCAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAgttgttgtt                                                                                      >  3:370984/1‑149 (MQ=255)
                                                               cAAAAATAACTCAGACTAGTAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttatttaagtgatattggtt                                                                                      >  1:361054‑M2/1‑90 (MQ=255)
                                                               cAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATTCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                                                                     >  1:285479‑M2/1‑90 (MQ=255)
                                                                  aaaTAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgatt                                                                                  <  2:104288/149‑1 (MQ=255)
                                                                       aCTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTgaga                                                                              <  3:291915/148‑1 (MQ=255)
                                                                         tCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAAc                                                                            >  2:200661/1‑148 (MQ=255)
                                                                          cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCt                                                                                                        <  4:366568‑M1/45‑1 (MQ=255)
                                                                          cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACaa                                                                          >  5:180327‑M1/75‑149 (MQ=255)
                                                                          cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACa                                                                           <  6:180327‑M1/74‑1 (MQ=255)
                                                                            gACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAAt                                                                        <  3:374096/149‑1 (MQ=255)
                                                                             gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAAGAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGCACAAAt                                                                        <  8:381350‑M1/77‑1 (MQ=255)
                                                                                  tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGtt                                                                   >  5:1104‑M1/67‑148 (MQ=255)
                                                                                    tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTAt                                                                <  1:289526‑M1/85‑1 (MQ=255)
                                                                                    aaatcataaatcatATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTTTGAACAAATAAGTTTAt                                                                >  5:84312/1‑149 (MQ=255)
                                                                                    aaatcataaatcatATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTa                                                                 <  4:123287/148‑1 (MQ=255)
                                                                                     aatcataaatcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTAtg                                                               >  1:304901/1‑149 (MQ=255)
                                                                                      cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgatt                                                                                  >  5:50728‑M1/63‑129 (MQ=255)
                                                                                      cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgatt                                                                                  <  6:50728‑M1/67‑1 (MQ=255)
                                                                                      cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTAt                                                                >  2:231196‑M1/63‑147 (MQ=255)
                                                                                      cggcagcgggattgtaatgggttaagtgataacagatgtctggaaatatatgggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTAtgt                                                              >  4:73037‑M1/63‑149 (MQ=255)
                                                                                       tcataaatcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTAttt                                                              >  5:191390/1‑146 (MQ=255)
                                                                                         ataaatcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGa                                                            >  3:321445/1‑148 (MQ=255)
                                                                                            aatcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa                                                        >  4:100584‑M2/1‑61 (MQ=255)
                                                                                            aatcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggcccactgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga                                                         <  1:261630‑M2/148‑88 (MQ=255)
                                                                                             atcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGaaaaa                                                        >  2:55784/1‑148 (MQ=255)
                                                                                             atcataTGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAat                                                       <  1:156393/149‑1 (MQ=255)
                                                                                                atatGCGTTGAATGGATATTATCCATATAGTTAATTTGTTTATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga                                                    >  6:277693‑M2/1‑57 (MQ=255)
                                                                                                   tGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATaa                                                 <  2:30405/149‑1 (MQ=255)
                                                                                                    gCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat                                                   <  6:243094‑M2/146‑94 (MQ=255)
                                                                                                    gCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat                                                   >  5:243094‑M2/1‑53 (MQ=255)
                                                                                                     cGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAAt                                               <  1:277751/149‑1 (MQ=255)
                                                                                                      atgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttga                                                                                    <  5:341563‑M1/65‑1 (MQ=255)
                                                                                                      atgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttga                                                                                    >  6:341563‑M1/47‑111 (MQ=255)
                                                                                                       ttGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATAc                                             <  1:366587/149‑1 (MQ=255)
                                                                                                       tgggttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATAc                                             >  1:231234‑M1/46‑149 (MQ=255)
                                                                                                          gttaagtgataacagatgtctggaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgattg                                                                                 >  7:114330‑M1/43‑110 (MQ=255)
                                                                                                          aaTGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga                                                 <  5:115645‑M2/142‑96 (MQ=255)
                                                                                                                tattatCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTgg                                    >  2:68631/1‑149 (MQ=255)
                                                                                                                  ttatCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCAGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTc                                  <  4:315259/149‑1 (MQ=255)
                                                                                                                    atCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCtt                                >  8:234743/1‑149 (MQ=255)
                                                                                                                     acagatgtctggaaatatagcggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCtt                                >  2:247956‑M1/32‑148 (MQ=255)
                                                                                                                      ccATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTtgt                              >  4:63032/1‑149 (MQ=255)
                                                                                                                       cATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTtgt                              <  1:55784/148‑1 (MQ=255)
                                                                                                                       cATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTtgt                              <  1:68631/148‑1 (MQ=255)
                                                                                                                         tataGTTAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTtgtgtg                           <  5:267449/149‑1 (MQ=255)
                                                                                                                           taGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATaaa                                                <  5:14961/126‑1 (MQ=255)
                                                                                                                             gTGAATTTTTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCa                        <  7:230468/148‑1 (MQ=255)
                                                                                                                             gTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCa                        <  7:158215/148‑1 (MQ=255)
                                                                                                                                gaaatataggggcaaatccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCtt                                <  3:150140‑M1/117‑1 (MQ=255)
                                                                                                                                        gatgatgaATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTAttttttt            >  8:47651/1‑149 (MQ=255)
                                                                                                                                         atgatgaATTCATCTGtagactggccccctgaatctccagccaaccaatatcactgaaataagtgatagtcttaatactagtgtttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacc           <  4:366385‑M2/149‑134 (MQ=255)
                                                                                                                                          tgatgaATTCATCTGGGATAAAAAGGTTAGTTTAATAAATTATTGAAAGTGACCTGTAATAAAAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTAttttttttt          <  6:84312/149‑1 (MQ=255)
                                                                                                                                                tccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTTGTCTTGTGTGTCATTTTATTTTTTTTTGTTGc     <  5:20822‑M1/144‑1 (MQ=255)
                                                                                                                                                 ccaATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACATGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTATTGTGTGTCATTTTATTTTAtattgttgat    <  4:5235‑M1/145‑3 (MQ=255)
                                                                                                                                                   cATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTaa  <  3:201815/148‑1 (MQ=255)
                                                                                                                                                   aATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgattg                                                                                 >  7:326184‑M1/2‑69 (MQ=255)
                                                                                                                                                   aATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGttgattg                                                                                 <  8:326184‑M1/68‑1 (MQ=255)
                                                                                                                                                    aTCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATa                                                                       <  8:1133/78‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TATCTTTCTATTGCTGATATTAATCTGAATCGGTGGAGTTTATTGATTTTAAATATAGCCCTACAAAAATAACTCAGACTAATAAAATCATAAATCATATGCGTTGAATGGATATTATCCATATAGTGAATTTGTTGATGATGAATTCATCTGTGCTAAAAATGTTAGTTTAATAAAATATTGAAAGTGACCTGTAATAACAGTTGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAA  >  NC_000913/522929‑523223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.