New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 189788	31 (1.120)	4 (0.150)	4/250	2.9	12.5%	noncoding (77/136 nt)	tff	novel sRNA, function unknown
	?	NC_000913	= 189828	27 (1.030)					noncoding (117/136 nt)	tff	novel sRNA, function unknown
Rejected: Frequency below/above cutoff threshold.

GACGTCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGTCACCAGACC  >  NC_000913/189643‑189933                                                                                                                                                  |                                                                                                                                                  gACGTCTGATGCTGTTCATAGCTCCAAGAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCgg                                                                                                                                                 <  8:45751/148‑1 (MQ=255)     tCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGcaca                                                                                                                                             >  6:80546/1‑148 (MQ=255)     tCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGcaca                                                                                                                                             >  3:15066/1‑148 (MQ=255)          tGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTcc                                                                                                                                       <  3:32511/149‑1 (MQ=255)            cTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCgg                                                                                                                                     <  5:80546/149‑1 (MQ=255)               tACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCggg                                                                                                                                    <  4:15066/147‑1 (MQ=255)                        ccAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTgg                                                                                                                         <  2:1571/149‑1 (MQ=255)                         caacaaTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTggg                                                                                                                        <  6:100916/149‑1 (MQ=255)                           acaaTTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCccatattaccgaccccaaagggcaccccg                                                                                                                      >  2:33708‑M1/1‑120 (MQ=255)                                          cACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGga                                                                                                         <  1:50104‑M2/147‑3 (MQ=255)                                          cACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGga                                                                                                         >  2:50104‑M2/1‑145 (MQ=255)                                          cACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGGAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGgata                                                                                                       <  4:72422‑M2/149‑5 (MQ=255)                                                 tATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCccatattaccgaccccaaagggcaccccggaatatgtgccgatacgtgtgt                                                                                                <  1:33708‑M1/149‑52 (MQ=255)                                                          tataAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCccatattaccgaccccaaagggcaccccggaatatgtgccggtacgtgtgtgt                                                                                              >  5:123940‑M1/1‑89 (MQ=255)                                                          tataAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCccatattaccgaccccaaagggcaccccggaatatgtgccgatacgtgtgtgt                                                                                              <  6:123940‑M1/142‑54 (MQ=255)                                                            taAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAAcccc                                                                                      >  8:36151/1‑148 (MQ=255)                                                                      cGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGGAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTtatat                                                                           <  3:72422/149‑1 (MQ=255)                                                                        gACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTtat                                                                             >  6:38314/1‑145 (MQ=255)                                                                        gACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTtat                                                                             <  5:38314/145‑1 (MQ=255)                                                                                     tttCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAata                                                                                                              <  8:1903/99‑1 (MQ=255)                                                                                     tttCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAata                                                                                                              >  7:1903/1‑99 (MQ=255)                                                                                          tataCACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATgg                                                                                                           <  6:32895/97‑1 (MQ=255)                                                                                               acaGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGtt                                                  >  4:115248/1‑149 (MQ=255)                                                                                                     tGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACttt                                                                                >  3:47643/1‑113 (MQ=255)                                                                                                     tGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACttt                                                                                <  4:47643/113‑1 (MQ=255)                                                                                                     tGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATg                                            >  6:17643/1‑149 (MQ=255)                                                                                                     tGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATg                                            >  6:15674/1‑149 (MQ=255)                                                                                                       gACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATg                                            <  7:36151/147‑1 (MQ=255)                                                                                                              gCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATg                                   <  5:15674/149‑1 (MQ=255)                                                                                                              gCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGGCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATg                                   <  5:17643/149‑1 (MQ=255)                                                                                                                gACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCt                                 >  1:62427/1‑149 (MQ=255)                                                                                                                          cTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTg                         >  1:110493/1‑147 (MQ=255)                                                                                                                          cTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTg                         <  2:110493/147‑1 (MQ=255)                                                                                                                                 tAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGCCTGGTGTTCACt                >  7:105515/1‑149 (MQ=255)                                                                                                                                      acacacacGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGgatacgtgtgtgttgttacacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttata                  <  6:123940‑M2/142‑90 (MQ=255)                                                                                                                                      acacacacGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGt           <  2:62427/149‑1 (MQ=255)                                                                                                                                      acacacacGTACCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGgatacgtgtgtgttgttacacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttata                  >  5:123940‑M2/1‑53 (MQ=255)                                                                                                                                        acacacGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGgatacgtgtgtgttgttacacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttataccacaaata         <  1:33708‑M2/149‑99 (MQ=255)                                                                                                                                          acacGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAAcccc                                                                                      >  7:104654/1‑70 (MQ=255)                                                                                                                                          acacGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAAcccc                                                                                      <  8:104654/70‑1 (MQ=255)                                                                                                                                              gTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGTCACCAGAc   >  5:49889/1‑149 (MQ=255)                                                                                                                                               tATCccatattaccgaccccaaagggcaccccggaatatgtgccgatacgtgtgtgttgttccacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttataccacaaatacgtcgtg  <  4:72422‑M1/149‑146 (MQ=255)                                                                                                                                                 tCccatattaccgaccccaaagggcaccccggaatatgtgccgatacgtgtgtgttgttacacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttataccacaaatacgtcgtg  <  1:50104‑M1/147‑146 (MQ=255)                                                                                                                                                 tCccatattaccgaccccaaagggcaccccggaatatgtgccgatacgtgtgtgttgttacacaaagtgagattgtcgcttccgtccagtctgtgtatacgaaatggatcggaagtccggcgcgctttataccacaaatacgtcgtg  >  2:50104‑M1/1‑2 (MQ=255)                                                                                                                                                  |                                                                                                                                                  GACGTCTGATGCTGTACACAGCGCCAACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCGGCACATATTCCGGGGTGCCCTTTGGGGTCGGTAATATGGGATACGTGGAGGCATAACCCCAACTTTTATATAGAGGTTTTAATCATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGTCACCAGACC  >  NC_000913/189643‑189933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.