New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	366083 =	30 (1.080)	5 (0.180)	5/260	2.7	14.4%	coding (223/3075 nt)	lacZ	beta‑D‑galactosidase
	?	NC_000913	366123 =	30 (1.110)					coding (183/3075 nt)	lacZ	beta‑D‑galactosidase
Rejected: Frequency below/above cutoff threshold.

TAACAACCCGTCGGATTCTCCGTGGGAACAAACGGCGGATTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGA  >  NC_000913/365935‑366228                                                                                                                                                     |                                                                                                                                                  acaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttg                                                                                                                                                   <  2:64012‑M1/1‑1 (MQ=255)  caacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttGc                                                                                                                                                  >  4:49333‑M1/148‑149 (MQ=255)                     cGTGGGAACAAACGGCGGATTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCg                                                                                                                                  <  6:21883/146‑1 (MQ=255)                      gTGGGAACAAACGGCGGATTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTc                                                                                                                              >  5:34154/1‑149 (MQ=255)                                acccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttGCCAGCTTTCCGGCACCGCTTCTGGTGCCgg                                                                                                                     >  8:83824‑M1/118‑148 (MQ=255)                                                          gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGcgccattcgccatt                                                                                          >  1:59513/1‑149 (MQ=255)                                                          gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGcgccattcgccatt                                                                                          >  7:9084/1‑149 (MQ=255)                                                           tCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCAc                                                                                                                                    <  6:95070/106‑1 (MQ=255)                                                           tCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCAc                                                                                                                                    >  5:95070/1‑106 (MQ=255)                                                              cctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGcgccattcgcc                                                                                             <  5:117649‑M1/55‑1 (MQ=255)                                                              cctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGcgccattcgcc                                                                                             >  6:117649‑M1/88‑142 (MQ=255)                                                                         aTGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTg                                                                           >  7:100074/1‑149 (MQ=255)                                                                          tGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGt                                                                          <  8:100074/149‑1 (MQ=255)                                                                             gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTgg                                                                       <  8:9084/149‑1 (MQ=255)                                                                                 aTCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAg                                                                   <  2:59513/149‑1 (MQ=255)                                                                                      aaCCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCGCCGGAAGCTCGCACTCCAGCCAGCTTTCCGGCACCCCGTCTGGTGCCGGAAACCAGGCAAACCGCCATTCGCCATTCAGGCTCCGCAACTGTTGGGAAGGGCGa                                                              >  4:88078/1‑149 (MQ=255)                                                                                                     aGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATc                                                            <  8:104606/136‑1 (MQ=255)                                                                                                     aGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATc                                                            >  7:104606/1‑136 (MQ=255)                                                                                                          cccttcccaacagttgcgcagcctgaatggcgaatggcgctttGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAg                                                                                                              <  1:66723‑M1/38‑1 (MQ=255)                                                                                                          cccttcccaacagttgcgcagcctgaatggcgaatggcgctttGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAg                                                                                                              >  2:66723‑M1/44‑81 (MQ=255)                                                                                                            ggggACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGaa                                                                    >  4:59863/1‑121 (MQ=255)                                                                                                            ggggACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGaa                                                                    <  3:59863/121‑1 (MQ=255)                                                                                                                 cgacgacAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGc                                   <  6:34154/149‑1 (MQ=255)                                                                                                                  gacgacAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGc                                   >  5:116367/1‑148 (MQ=255)                                                                                                                    cgacAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAg                                <  6:116367/149‑1 (MQ=255)                                                                                                                      acAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCa                                                                                        >  7:98890/1‑91 (MQ=255)                                                                                                                      acAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCa                                                                                        <  8:98890/91‑1 (MQ=255)                                                                                                                                  tCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAgggg                   >  5:115457/1‑148 (MQ=255)                                                                                                                                    aGGAAGATCGCACTCCAGGCAGCGTTCCGGCACCGCTGCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAAGTGTTGGGAAGGGCGATCGGTGCGGGCCGCTTCGCTATTACGCCAGCTGGCGAAAGGGGGAt                <  3:88078/149‑1 (MQ=255)                                                                                                                                          aTCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGtgctg          >  1:43393/1‑149 (MQ=255)                                                                                                                                               aCTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGcgccattcgccat                                                                                           <  6:107786/63‑1 (MQ=255)                                                                                                                                               aCTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAgg     >  1:64012/1‑149 (MQ=255)                                                                                                                                               aCTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGACGGAAACCAGGCAAAGcgccattcgccat                                                                                           >  5:107786/1‑63 (MQ=255)                                                                                                                                                 tCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGc    >  4:72825/1‑148 (MQ=255)                                                                                                                                                 tCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGc    >  4:103186/1‑148 (MQ=255)                                                                                                                                                   cagccagcTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCgg                                                     <  8:77402/97‑1 (MQ=255)                                                                                                                                                   cagccagcTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGa  <  2:43393/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TAACAACCCGTCGGATTCTCCGTGGGAACAAACGGCGGATTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGA  >  NC_000913/365935‑366228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.