New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3134555	28 (1.010)	4 (0.150)	4/254	3.0	13.2%	coding (425/693 nt)	yghT	putative ATP‑binding protein
	?	NC_000913	= 3134592	26 (0.980)					coding (462/693 nt)	yghT	putative ATP‑binding protein
Rejected: Frequency below/above cutoff threshold.

TGCGCTTTCGTCATATGCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCATAAC  >  NC_000913/3134414‑3134699                                                                                                                                              |                                                                                                                                                 tGCGCTTTCGTCATATGCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTcgccatc                                                                                                                                           >  1:130726‑M1/1‑142 (MQ=255)                 gCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGt                                                                                                                           >  4:78815/1‑149 (MQ=255)                   ttGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGttt                                                                                                                         >  5:106769/1‑149 (MQ=255)                   ttGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGttt                                                                                                                         >  3:94230/1‑149 (MQ=255)                   ttGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGttt                                                                                                                         >  2:99431/1‑149 (MQ=255)                      ccTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCAc                                                                                                                      <  6:103591/149‑1 (MQ=255)                       ctctcgtcgtcgCTGGTTAATTGTTCTACCCGACCGTTATCCGCAGGACCAAATTCCTGGCGCTTACGCGGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGGTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGCTTCACt                                                                                                                     <  8:88072/146‑1 (MQ=255)                        tGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTg                                                                                                                    >  1:97872/1‑149 (MQ=255)                             tcgtcgCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATgg                                                                                                               <  2:97872/149‑1 (MQ=255)                                    gggTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGagcca                                                                                                        >  6:106769‑M2/1‑144 (MQ=255)                                          aTTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTcgccatccagtgaaacgctttacgttcctggcttgccagccatgaga                                                                                                   <  2:130726‑M1/148‑48 (MQ=255)                                          aTTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGa                                                                                                                  <  7:103280/133‑1 (MQ=255)                                          aTTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGa                                                                                                                  >  8:103280/1‑133 (MQ=255)                                             gTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTcgccatccagtgaaacgctttacgttcctggcttgccagccatga                                                                                                     >  3:37738‑M1/1‑98 (MQ=255)                                             gTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTcgccatccagtgaaacgctttacgttcctggcttgccagccatga                                                                                                     <  4:37738‑M1/143‑46 (MQ=255)                                               tCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATc                                                                                             >  6:68077/1‑149 (MQ=255)                                                 tAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTg                                                                                           >  5:129487/1‑149 (MQ=255)                                                   accgaccgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTg                                                                                           <  4:94230/147‑1 (MQ=255)                                                       accgTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGtcatc                                                                                     <  3:78815/149‑1 (MQ=255)                                                                 tCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGa                                                                                                            <  2:122338‑M2/116‑2 (MQ=255)                                                                 tCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGa                                                                                                            >  1:122338‑M2/1‑115 (MQ=255)                                                                   aGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATg                                                                           <  1:99431/147‑1 (MQ=255)                                                                    ggACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGtt                                                                         >  2:125598/1‑148 (MQ=255)                                                                     gACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGa                                                                       <  5:68077/149‑1 (MQ=255)                                                                        cAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCt                                                                    >  7:54471/1‑149 (MQ=255)                                                                            ttCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGaa                                                                <  1:125598/149‑1 (MQ=255)                                                                            ttCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGaa                                                                <  8:54471/149‑1 (MQ=255)                                                                                     cTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCtgt                                                       >  7:60990/1‑149 (MQ=255)                                                                                               tACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAAc                                             <  6:129487/149‑1 (MQ=255)                                                                                                               aaCGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACggg                              >  7:111933/1‑148 (MQ=255)                                                                                                                                ttttGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGc                                                           >  1:114509/1‑102 (MQ=255)                                                                                                                                ttttGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGc                                                           <  2:114509/102‑1 (MQ=255)                                                                                                                                  ttGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGAt           <  8:60990/148‑1 (MQ=255)                                                                                                                                     tctcATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctgaggataacggtcggttagaacaat        <  2:130726‑M2/148‑102 (MQ=255)                                                                                                                                       tcATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctgaggataacggtcggttagaac           <  4:37738‑M2/143‑99 (MQ=255)                                                                                                                                       tcATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctgaggataacggtcggttagaac           >  3:37738‑M2/1‑45 (MQ=255)                                                                                                                                       tcATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCa      >  1:11287/1‑148 (MQ=255)                                                                                                                                          tggctggcAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCATAAc  <  2:11287/149‑1 (MQ=255)                                                                                                                                          tGGCTcgccatccagtgaaacgctttacgttcctggcttgccagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctgaggataacggtcggttagaacaattaaccc  >  6:106769‑M1/1‑5 (MQ=255)                                                                                                                                              tcgccatccagtgaaacgctttacgttcctggcttgccagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctga                               >  1:122338‑M1/1‑1 (MQ=255)                                                                                                                                              tcgccatccagtgaaacgctttacgttcctggcttgccagccatgagacaaaacgaccaccttcaacgttaggtgggaacaccgtaccatcgtaagcgccaggaatttggtcctga                               <  2:122338‑M1/116‑116 (MQ=255)                                                                                                                                              |                                                                                                                                                 TGCGCTTTCGTCATATGCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCATAAC  >  NC_000913/3134414‑3134699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.