| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4576863 = | 45 (1.620) | 4 (0.160) | 4/246 | 2.9 | 8.8% | intergenic (+8/+49) | yjiV/mcrC | pseudogene; conserved hypothetical protein/5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrC |
| ? | NC_000913 | 4576890 = | 41 (1.600) | intergenic (+35/+22) | yjiV/mcrC | pseudogene; conserved hypothetical protein/5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrC | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGC > NC_000913/4576718‑4577006 | gcagtgaaacatcgttataaaattaatggcttcgatattggcttgtgtaccgtcaatttaggtcaggaatggccgtgtatacatcaagaattactcgacattttcgatgaatatctcaaataagcggtaagttttatagaaaataCCGc < 4:88160‑M1/4‑1 (MQ=255) tgaaacatcgttataaaattaatggcttcgatattggcttgtgtaccgtcaatttaggtcaggaatggccgtgtatacatcaagaattactcgacattttcgatgaatatctcaaataagcggtaagttttatagaaaataCCGCTccc < 6:126655‑M1/8‑1 (MQ=255) ttACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGAtg < 1:109415/149‑1 (MQ=255) cTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGAtgtg < 7:93580/148‑1 (MQ=255) tttGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATgtggt > 2:130446/1‑149 (MQ=255) atattggcttgtgtaccgtcaatttaggtcaggaatggccgtgtatacatcaagaattactcgacattttcgatgaatatctcaaataagcggtaagttttatcgaaaataCCGCTCCCGATGTGGCGTCGGGAGCGGTATTTTCtata > 4:82266‑M1/112‑149 (MQ=255) tttcCAGTTGGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCg > 1:136587/1‑136 (MQ=255) tttcCAGTTGGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCg < 2:136587/136‑1 (MQ=255) aGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGATGTGATCGCCTCCTGATGATGAGCCGATCCCGATGTGGTTTCGGGAGCGGTATTTTATATAAAACt > 6:108309/1‑148 (MQ=255) tCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCt > 1:125766/1‑149 (MQ=255) aaaaTGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTa > 3:26253/1‑149 (MQ=255) aTGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTAttt < 2:125766/149‑1 (MQ=255) gCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTgag < 5:108309/149‑1 (MQ=255) gCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTga < 4:4531/148‑1 (MQ=255) aGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGat < 4:26253/147‑1 (MQ=255) aGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTT‑GGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATAtt > 6:21732/1‑149 (MQ=255) cTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCAt < 1:130446/149‑1 (MQ=255) cTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTGATTTGAGATATTCAt > 1:90707/1‑149 (MQ=255) aggaaggGAATGTCGCCAACAGCGAAGAGAGTT‑GGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGaaaa < 5:21732/149‑1 (MQ=255) ggaaggGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGaaaa < 5:14749/149‑1 (MQ=255) gaaggGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTc > 5:85101/1‑140 (MQ=255) gaaggGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTc < 6:85101/140‑1 (MQ=255) aggGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGt < 8:81670/149‑1 (MQ=255) aggGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGt > 7:81670/1‑149 (MQ=255) ggAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTc > 3:17840/1‑148 (MQ=255) tatacatcaataattactcgacattttcgatgaatatctcaaataagcggtaagttttatagaaaataCCGCTCCCGATGTGGTGTCTGGAGCGGTATTTTc > 6:102834‑M1/69‑102 (MQ=255) tCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTTGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTAtt < 6:117928/120‑1 (MQ=255) tCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTAtt > 5:117928/1‑120 (MQ=255) cAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCtt < 2:90707/149‑1 (MQ=255) aaCAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCtt > 1:79557/1‑148 (MQ=255) aCAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGa < 2:79557/149‑1 (MQ=255) aaGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTc > 2:98876/1‑130 (MQ=255) aaGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTc < 1:98876/130‑1 (MQ=255) ctcgacattttcgatgaatatctcaaataagcggtaagttttatagaaaataCCGCTCCCGATGTGGTGTCGGGAGCGGTAtt > 2:114115‑M1/53‑83 (MQ=255) ctcgacattttcgatgaatatctcaaataagcggtaagttttatagaaaataCCGCTCCCGATGTGGTGTCGGGAGCGGTAtt < 1:114115‑M1/31‑1 (MQ=255) ttGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAAt < 8:2946/120‑1 (MQ=255) ttGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGtat < 2:20021/141‑1 (MQ=255) ttGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGc > 5:126655/1‑148 (MQ=255) ttGGGCAACGGATGTGCTGGTGGAGGTGATCCCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGtat > 1:20021/1‑141 (MQ=255) gCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAg < 7:24075/122‑1 (MQ=255) gCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAg > 8:24075/1‑122 (MQ=255) gCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTc < 4:17840/149‑1 (MQ=255) tgCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAg > 4:64601/1‑112 (MQ=255) aTCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTac < 5:78250/145‑1 (MQ=255) aTCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTac > 6:78250/1‑145 (MQ=255) gatgatgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTc > 2:47384/1‑85 (MQ=255) gatgatgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTc < 1:47384/85‑1 (MQ=255) gatgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACgg > 7:63636/1‑106 (MQ=255) gatgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACgg < 8:63636/106‑1 (MQ=255) atgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGc > 3:88160/1‑149 (MQ=255) tgaGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGc > 1:23393/1‑148 (MQ=255) | CAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGATGATGAGCCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGC > NC_000913/4576718‑4577006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |