New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3618495 =	48 (1.290)	4 (0.120)	4/236	4.3	7.6%	coding (720/807 nt)	nikE	nickel ABC transporter ATPase
	?	NC_000913	3618580 =	52 (1.510)					coding (805/807 nt)	nikE	nickel ABC transporter ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTCAGGCTGTCCAGCGTCTCCAGTAAATCGTCATCAAGCGTGATGGTGACTCGTTGCATTTGCGTTAAACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAAGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3618647‑3618495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaaaggttTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAC  >  NC_000913/3618580‑3618721                                                                                                                                                                                                                                                                                                         GCTCAGGCTGTCCAGCGTCTCCAGTAAATCGTCATCAAGCGTGATGGTGACTCGTTGCATTTGCGTTAAACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAA                                                                                                                                                    <  8:101289/149‑1                                                      GTTGCATTTGCGTTAAACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAA                                                                                                                                                    <  3:55259/96‑1                                                      GTTGCATTTGCGTTAAACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAA                                                                                                                                                    >  4:55259/1‑96                                                                 GTTAAACCTTTTCAGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTAGATGACGATTTACTGGAGACGCTGGACA                                                                                    >  1:149512/1‑149                                                                      ACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGA                                                                                      <  7:80179/142‑1                                                                      ACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGA                                                                                      >  8:80179/1‑142                                                                                                                                      CGGCGTCAGAGGAAAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTAGTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCGCTG                <  2:149512/148‑1                                                                                                                                                   AAAGGTTTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAC  <  5:143450/149‑1                                                                                                                                                         TTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAG                                             >  1:58115/1‑100                                                                                                                                                         TTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAG                                             <  2:58115/100‑1                                                                                                                                                                                                                                                                                                         GCTCAGGCTGTCCAGCGTCTCCAGTAAATCGTCATCAAGCGTGATGGTGACTCGTTGCATTTGCGTTAAACCTTTTCTGTGGTGCGACGGCGCACGGGGAATGCGGGTAATACCGCGTTTTGTAGCACACGTCCGGCGTCAGAGGAAAAGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3618647‑3618495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaaaggttTAACGCAAATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCAC  >  NC_000913/3618580‑3618721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.