New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 398661486 (1.040)5 (0.070) 5/242 NT 5.8% noncoding (183/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
?NC_000913 = 3986622 83 (1.100)noncoding (191/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent

Only 100 of 121 total aligned reads displayed.

CCTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGC  >  NC_000913/3986469‑3986761
                                                                                                                                                 |                                                                                                                                                   
ccTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGTACACAACGTTGAGTGAATCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCg                                                                                                                                                   <  6:153954/148‑1 (MQ=255)
    aTAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaat                                                                                                                                               <  8:121805/148‑1 (MQ=255)
    aTAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaa                                                                                                                                                <  3:337464/147‑1 (MQ=255)
       aaCTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTTAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAga                                                                                                                                           >  3:235983‑M2/1‑147 (MQ=255)
         cTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagc                                                                                                                                         >  2:131357‑M2/1‑145 (MQ=255)
         cTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagc                                                                                                                                         >  3:115913‑M2/1‑145 (MQ=255)
          tCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACGCCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgag                                                                                                                                          <  5:297151‑M2/147‑4 (MQ=255)
            cGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagcagg                                                                                                                                      <  4:312506‑M2/149‑8 (MQ=255)
             ggAATGACGCAGAGCCGTTTACGTTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGCCACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagcaggc                                                                                                                                     <  6:208135‑M2/149‑9 (MQ=255)
             ggAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGTACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagcaggc                                                                                                                                     >  7:148572‑M2/1‑141 (MQ=255)
                 tGACGCAGCGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCCGCCACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgcgcaggcggtg                                                                                                                                 <  4:164992‑M2/149‑13 (MQ=255)
                   aCGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGtttt                                                                                                                                <  8:253062/148‑1 (MQ=255)
                    cGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGtttttt                                                                                                                              >  6:210502/1‑149 (MQ=255)
                     gCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGtttttt                                                                                                                              >  1:58113/1‑148 (MQ=255)
                         agCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATg                                                                                                                          >  6:51805/1‑148 (MQ=255)
                              tttACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCTCCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAg                                                                                                                    >  6:161593/1‑149 (MQ=255)
                                     tGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGcc                                                                                                             >  1:36735/1‑149 (MQ=255)
                                     tGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTGGCGTGAAGCACCCACTTGTTGTCATACACACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGcc                                                                                                             <  2:89905/149‑1 (MQ=255)
                                         tATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCg                                                                                                          >  3:113193/1‑148 (MQ=255)
                                         tATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCg                                                                                                          >  8:35771/1‑148 (MQ=255)
                                           tCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAg                                                                                                       <  4:113193/149‑1 (MQ=255)
                                             gTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGtaataa                                                                                                                                             <  2:330150/109‑1 (MQ=255)
                                                cACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGTAAGGCCCCGGAGGTGCt                                                                                                  <  3:28147/149‑1 (MQ=255)
                                                 aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTAt                                                                                                                           >  3:324414/1‑123 (MQ=255)
                                                 aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                 <  4:62564/149‑1 (MQ=255)
                                                 aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCtt                                                                                                 <  1:290339/149‑1 (MQ=255)
                                                        gATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCg                                                                                          <  2:347405/149‑1 (MQ=255)
                                                            tCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGt                                                                                       <  5:336643/148‑1 (MQ=255)
                                                            tCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGt                                                                                       <  8:12639/148‑1 (MQ=255)
                                                                ttATGCCTCTTCAGACACCATGGACACAACGTTGATTGAAGAACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGGAGGCTGTATTTTATGTATCATGAAGGCCCCGGAGGTTCTTGCCTCAGGGGgag                                                                                    >  8:163912/1‑147 (MQ=255)
                                                                  aTGCCTCATCAGACGCCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAg                                                                                 <  6:297151/148‑1 (MQ=255)
                                                                  aTGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGaa                                                                                  <  6:149223/147‑1 (MQ=255)
                                                                     ccTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGaa                                                                              <  3:54344/148‑1 (MQ=255)
                                                                     ccTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAac                                                                             >  4:3324/1‑149 (MQ=255)
                                                                        catcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAactac                                                                          >  2:68493/1‑149 (MQ=255)
                                                                          tcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATACGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtg                                                                        <  8:347323/149‑1 (MQ=255)
                                                                          tcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtg                                                                        >  5:129430/1‑149 (MQ=255)
                                                                           caGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgt                                                                       >  4:36392/1‑149 (MQ=255)
                                                                              acacCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGc                                                                    >  3:19675/1‑149 (MQ=255)
                                                                                acCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCgg                                                                  <  1:68493/149‑1 (MQ=255)
                                                                                 ccATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTAGTGTGGCggg                                                                 >  3:2119/1‑149 (MQ=255)
                                                                                 ccATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCggg                                                                 <  4:74307/149‑1 (MQ=255)
                                                                                 ccATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCggg                                                                 <  7:250460/149‑1 (MQ=255)
                                                                                  cATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGt                                                                >  5:88512/1‑149 (MQ=255)
                                                                                   aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGt                                                                >  5:301029/1‑148 (MQ=255)
                                                                                      gACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTAtt                                                            <  4:158339/149‑1 (MQ=255)
                                                                                      gACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTAtt                                                            <  3:172523/149‑1 (MQ=255)
                                                                                       acacAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTc                                                           >  4:293114/1‑149 (MQ=255)
                                                                                        cacaACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCt                                                          <  5:269686/149‑1 (MQ=255)
                                                                                         acaACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTg                                                         >  4:251798/1‑149 (MQ=255)
                                                                                         acaACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTg                                                         >  1:341126/1‑149 (MQ=255)
                                                                                          caACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTg                                                         >  5:281144/1‑148 (MQ=255)
                                                                                          caACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTg                                                         >  7:133425/1‑148 (MQ=255)
                                                                                           aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCttattacggagcaggcgttaaaaca                                                                                                                            >  4:215835‑M1/1‑55 (MQ=255)
                                                                                           aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCttattacggagcaggcgttaaaaca                                                                                                                            <  3:215835‑M1/80‑26 (MQ=255)
                                                                                           aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGc                                                        >  1:41079/1‑148 (MQ=255)
                                                                                           aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGc                                                        >  3:75989/1‑148 (MQ=255)
                                                                                           aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGc                                                        >  3:293767/1‑148 (MQ=255)
                                                                                                 gAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGtt                                                  <  4:75989/148‑1 (MQ=255)
                                                                                                  aGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTaa                                                <  1:263938/149‑1 (MQ=255)
                                                                                                      aaGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACAt                                             >  6:280345/1‑148 (MQ=255)
                                                                                                      aaGCACACACTTGTTGTCATACAGCCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATc                                            <  6:164285/149‑1 (MQ=255)
                                                                                                         cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCTACGTTAACATCaaa                                         <  7:35771/149‑1 (MQ=255)
                                                                                                           cccACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAgagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacggtgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggac                                        <  6:185272‑M2/148‑102 (MQ=255)
                                                                                                              aCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGCGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTc                                    <  5:43030/149‑1 (MQ=255)
                                                                                                              aCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTc                                    <  5:161593/149‑1 (MQ=255)
                                                                                                              aCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTc                                    >  4:213051/1‑149 (MQ=255)
                                                                                                               cTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTACAACGTTAACATCAAACCGTcg                                   >  8:353596/1‑149 (MQ=255)
                                                                                                                     gtCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACg                              >  6:164013/1‑148 (MQ=255)
                                                                                                                      tCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCa                            >  6:289138/1‑149 (MQ=255)
                                                                                                                        aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGATTTTTTATGTATCAGGAAGGACCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCa                            >  2:73279/1‑147 (MQ=255)
                                                                                                                         tACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAg                         >  3:285546/1‑149 (MQ=255)
                                                                                                                         tACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAg                         >  1:144565/1‑149 (MQ=255)
                                                                                                                          aCAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGc                        >  4:96490/1‑149 (MQ=255)
                                                                                                                          aCAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCATGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGAGACGCATAGc                        >  4:91821/1‑149 (MQ=255)
                                                                                                                              aCCTGTTTTATCGCGTGCTCCGTAATAAGTGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGGTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACTCATAGCTGCa                    <  3:58591/149‑1 (MQ=255)
                                                                                                                                 tGTTTTAACGCCTGCTCCGTAATAAgagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgtt                                                                                      >  4:215835‑M2/1‑25 (MQ=255)
                                                                                                                                 tGTTTTAACGCCTGCTCCGTAATAAgagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgtt                                                                                      <  3:215835‑M2/80‑56 (MQ=255)
                                                                                                                                   ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc               >  3:167115/1‑149 (MQ=255)
                                                                                                                                   ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGctt                <  4:19675/148‑1 (MQ=255)
                                                                                                                                      caccgccTGCGCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtggcggatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggcgctgcgtca            <  4:164992‑M1/146‑138 (MQ=255)
                                                                                                                                       cccGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTAGGAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAGGGAACTACTGTGGCGGGGTATTCTGCAACGTTAACATCAAACAGTCGCGACGCATAGCTGCAGcttcttac           >  7:266295/3‑147 (MQ=255)
                                                                                                                                        aCGCCTGCTCCGTAATAAgagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcatt          <  3:2553‑M2/149‑132 (MQ=255)
                                                                                                                                        aCGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCg          >  8:324228/1‑149 (MQ=255)
                                                                                                                                        aCGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCg          >  1:23436/1‑149 (MQ=255)
                                                                                                                                          gCCTGCTCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtggctgatgaggcataagcgacatctgtcagtggacgataagcaacgtaaacggctctgcgtcattcc        <  6:208135‑M1/149‑142 (MQ=255)
                                                                                                                                          gCCTGCTCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtacatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattcc        >  7:148572‑M1/1‑8 (MQ=255)
                                                                                                                                          gCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc        >  4:319925/1‑149 (MQ=255)
                                                                                                                                          gCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc        <  3:293114/149‑1 (MQ=255)
                                                                                                                                          gCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc        >  2:276591/1‑149 (MQ=255)
                                                                                                                                          gCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc        >  1:320792/1‑149 (MQ=255)
                                                                                                                                           ccTGCTCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattccg       <  4:312506‑M1/149‑143 (MQ=255)
                                                                                                                                            cTGCTCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggccgataagcaccgtaaacggctctgcgtcattcag       >  6:65782‑M1/1‑6 (MQ=255)
                                                                                                                                            cTGCTCttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattccg       >  6:142561‑M1/1‑6 (MQ=255)
                                                                                                                                            cTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCtt      <  5:283365/149‑1 (MQ=255)
                                                                                                                                             tGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGATtg     >  2:230039/1‑149 (MQ=255)
                                                                                                                                               ctcttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggcgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattccgga     <  5:297151‑M1/147‑145 (MQ=255)
                                                                                                                                               cTCCGTAATAAgagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactcaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattccgga     >  4:2553‑M2/1‑11 (MQ=255)
                                                                                                                                               cTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcgcg                                 <  3:104263/119‑1 (MQ=255)
                                                                                                                                                tcttattacggagcaggcgttaaaacaggtctgtatgacaacaagtgggtgcttcactaaacgttgtgtccatggtgtctgatgaggcataagcgacatctgtcagtggacgataagcaccgtaaacggctctgcgtcattccggagtt  >  3:235983‑M1/1‑2 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CCTCATAAACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGC  >  NC_000913/3986469‑3986761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.