New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3423376 =96 (1.170)11 (0.140)
+TTGATGT
5/250 NT 11.9% intergenic (+182/+47) yhdZ/rrfF putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
?NC_000913 3423672 = 76 (0.920)noncoding (116/120 nt) rrfD 5S ribosomal RNA of rrnD operon

CGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCT  >  NC_000913/3423525‑3423812
                                                                                                                                                   |                                                                                                                                            
cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCt                                                                                                                                             <  8:313406/149‑1 (MQ=255)
 gcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg                                                                                                                                            <  5:290768/149‑1 (MQ=255)
 gcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg                                                                                                                                            <  5:363240/149‑1 (MQ=255)
   tACTGCCGCCAGACAAATTCTTTTCTAATCTTACCAACGTTAACCGAAAATCTGGAGCTGAAACCCAGAGTCGACCTGGGGACATAACACTTACCATCGGAGCGCTCGACCAGCTGAGACATATCATCCCGGTAAATGAGATGCCTGGc                                                                                                                                          >  8:85775/1‑149 (MQ=255)
   tACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCTAACTGGGGACCTCACCCTTACCAAGTGTGCGCTCTACCAACTGAGACATATAAGCAAGCTAAATTTGATGCCTgg                                                                                                                                           >  5:256908/1‑148 (MQ=255)
               aCAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGATCCCTActc                                                                                                                              >  1:370126/1‑149 (MQ=255)
                         ttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg                                                                                                                      <  1:169438/147‑1 (MQ=255)
                          tCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                                                                     >  8:162832/1‑147 (MQ=255)
                           cTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGga                                                                                                                   <  5:332716/148‑1 (MQ=255)
                           cTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGga                                                                                                                   <  6:152731/148‑1 (MQ=255)
                                 tGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                                                                            >  8:113916/1‑149 (MQ=255)
                                    cGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                                                                                          >  5:271371/1‑148 (MQ=255)
                                    cGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac                                                                                                         <  2:223189/149‑1 (MQ=255)
                                        cTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc                                                                                                      >  5:37205/1‑148 (MQ=255)
                                         tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCa                                                                                                    >  7:74027/1‑149 (MQ=255)
                                         tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACAAAGGGTGCGCTCTACCAAATGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCa                                                                                                    >  1:68865/1‑149 (MQ=255)
                                               cTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGTGAGACCCCACACTACCATCGgcg                                                                                              >  7:42299/1‑149 (MQ=255)
                                               cTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcg                                                                                              >  8:365495/1‑149 (MQ=255)
                                                tAAAAAGTGTTGCTGATACCCAGAGTAGAACTGGGGACCTCACCATTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATCCCTGCCAGTTCCCTACACTCGCATGGGGAGACCCCACCCAACCATCGccg                                                                                              >  2:217733/1‑148 (MQ=25)
                                                  aaaaGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCCCAAGGGGCGCCCCCCCACTACCATCGGCCCTa                                                                                           >  5:153193/1‑149 (MQ=25)
                                                      gtggtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCGCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc                                                                                       <  1:88624/149‑1 (MQ=255)
                                                         gtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCCTCGGCGCTACGGCGtt                                                                                    >  2:280913/1‑149 (MQ=255)
                                                         gtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt                                                                                    <  7:50728/149‑1 (MQ=255)
                                                         gtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGt                                                                                     <  7:365495/148‑1 (MQ=255)
                                                         gtgCTGATACCCAGAGTCGAACTGGGGACCTAACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt                                                                                    <  1:99086/149‑1 (MQ=255)
                                                             tGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCAc                                                                                >  2:136674/1‑149 (MQ=255)
                                                               cccatgcgagagtagggaactgccagacatcaaataaaacaaaaggctcagtcggaagacagggccttttgttttatttgatgtAAGGCAGTTCCCTACTCACGCAAGGGGAGACCCCACACAACCAACGGCGCTACGGCGTTTCACt                                                                               >  2:142183‑M2/85‑148 (MQ=255)
                                                                   ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGCCCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            >  5:546/1‑147 (MQ=255)
                                                                   ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            >  8:73388/1‑147 (MQ=255)
                                                                   ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            <  8:38979/147‑1 (MQ=255)
                                                                   ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            >  7:38979/1‑147 (MQ=255)
                                                                   ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            >  5:11053/1‑147 (MQ=255)
                                                                    cAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAg                                                                         >  8:39853/1‑149 (MQ=255)
                                                                    cAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAg                                                                         >  5:113264/1‑149 (MQ=255)
                                                                         tCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg                                                                    >  1:7331/1‑149 (MQ=255)
                                                                           gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg                                                                     >  4:242129/1‑146 (MQ=255)
                                                                           gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg                                                                     <  3:242129/146‑1 (MQ=255)
                                                                            aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt                                                                 >  2:186711/1‑149 (MQ=255)
                                                                            aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt                                                                 >  6:258483/1‑149 (MQ=255)
                                                                              cTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                                                               <  5:358882/149‑1 (MQ=255)
                                                                                 gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                                              >  5:250494/1‑131 (MQ=255)
                                                                                 gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                                              <  6:250494/131‑1 (MQ=255)
                                                                                 gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg                                                              <  6:546/147‑1 (MQ=255)
                                                                                    aCCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCTTGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAg                                                         <  1:217733/149‑1 (MQ=255)
                                                                                      cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                                       >  2:198752/1‑149 (MQ=255)
                                                                                      cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt                                                       >  4:83732/1‑149 (MQ=255)
                                                                                       tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg                                                      >  4:246153/1‑149 (MQ=255)
                                                                                       tCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg                                                      >  6:336321/1‑149 (MQ=255)
                                                                                         aCCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg                                                     >  1:78303/1‑148 (MQ=255)
                                                                                         aCCCTTACCAAGGGGTCGCTCTACCAACTGAGGCATATCTCCACGCTAAATTTGTTGCGTGGCTGTTCCCTACTGTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg                                                     <  2:370126/148‑1 (MQ=17)
                                                                                          cccTTACCAAGGGTGGGCTCTACGAACTGAGCCCTATCAGCTCGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCACTACGGCGTTTCACTTCTGTGTTCGGCTTGGGGTCAGGTGGGa                                                   <  6:153193/149‑1 (MQ=17)
                                                                                          cccTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                   <  7:73388/149‑1 (MQ=255)
                                                                                           ccTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac                                                  >  3:290939/1‑149 (MQ=255)
                                                                                            cTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGTGGACACCCCACACTACCATCGGCTCTACGGCGTTTCACTTCTGAGTTGGGCATGGGGTAAGGTGGGac                                                  >  4:43284/1‑148 (MQ=18)
                                                                                               aCCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGaccacc                                              >  3:225611/1‑149 (MQ=255)
                                                                                                ccAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcg                                             >  8:323699/1‑149 (MQ=255)
                                                                                                 cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGaccccat                                             <  8:61612/148‑5 (MQ=255)
                                                                                                 cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGaccccat                                             >  7:61612/1‑144 (MQ=255)
                                                                                                           ctctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccg                                  >  2:332471/1‑149 (MQ=255)
                                                                                                            tctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc                                 >  6:176403/1‑149 (MQ=255)
                                                                                                             ctcagtcggaagactgggccttttgttttatttgatgtCTGGCAGTTGCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                   <  3:13297‑M2/92‑1 (MQ=255)
                                                                                                             ctcagtcggaagactgggccttttgttttatttgatgtCTGGCAGTTGCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                   >  4:13297‑M2/39‑130 (MQ=255)
                                                                                                              tACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACGCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                             <  4:324793/103‑1 (MQ=255)
                                                                                                              tACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                                                                             >  3:324793/1‑103 (MQ=255)
                                                                                                                         ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCTGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg                    <  1:280913/149‑1 (MQ=255)
                                                                                                                          cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCATACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACAACCGCGCTACGGCCGCCAGGCAAATTCTGt                   >  4:238535/1‑149 (MQ=255)
                                                                                                                          aatatCAGAACGCTAAATTTGATGCCTTGCAGTTCCATACTCTCGCATGGGGAGACCCAAAACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACAACAGCGCTACGGCCGCCAGGCAAATTCTGt                   >  4:233821/2‑149 (MQ=11)
                                                                                                                           atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGtt                  >  1:18786/1‑149 (MQ=40)
                                                                                                                           atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCCCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGtt                  >  8:123286/1‑149 (MQ=255)
                                                                                                                            tatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt                 <  7:113916/149‑1 (MQ=39)
                                                                                                                            tatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt                 >  2:75155/1‑149 (MQ=39)
                                                                                                                            tatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCACAAACTACCATCGGCGCTACGTCGTTTCACTTCTGAGTACGGCATGCGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt                 >  3:85843/1‑149 (MQ=14)
                                                                                                                             atCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt                 >  3:226652/1‑148 (MQ=38)
                                                                                                                             atCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCAAACGAGCTTCCGCGCTACGGCGATACACTTCAGAGTTCTGCAAGGCGTCAGGTGGGACCACAGCGCTACGGACGCAAGTCAAATTCTGttt                 >  5:45037/1‑148 (MQ=11)
                                                                                                                              tCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                   <  5:288164/113‑1 (MQ=40)
                                                                                                                              tCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGa                                                   >  6:288164/1‑113 (MQ=40)
                                                                                                                               ccttttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCa                                                                                                                         >  4:118367‑M2/21‑42 (MQ=255)
                                                                                                                               ccttttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCa                                                                                                                         <  3:118367‑M2/22‑1 (MQ=255)
                                                                                                                               ccttttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            <  1:103798‑M2/67‑1 (MQ=255)
                                                                                                                               ccttttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                                                                            >  2:103798‑M2/21‑87 (MQ=255)
                                                                                                                                aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt              >  6:189565/1‑148 (MQ=35)
                                                                                                                                aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt              >  3:240276/1‑148 (MQ=35)
                                                                                                                                aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt              <  2:78303/148‑1 (MQ=35)
                                                                                                                                aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCCCGCTACGGCCGCCAGGCAAATTCTGTTTTAt              >  1:101968/1‑148 (MQ=25)
                                                                                                                                 ttttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt              >  2:20653‑M2/19‑147 (MQ=255)
                                                                                                                                 gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCa            <  2:7331/149‑1 (MQ=35)
                                                                                                                                  tttgttttatttgatgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgcc                                <  2:155560‑M2/111‑1 (MQ=255)
                                                                                                                                    cGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAc         <  5:189565/149‑1 (MQ=32)
                                                                                                                                     gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAcc        >  7:97088/1‑149 (MQ=32)
                                                                                                                                     gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAcc        >  3:2185/1‑149 (MQ=32)
                                                                                                                                      ttttatttgatgtCTGGCAGTTCCCTACTCTCGCa                                                                                                                         <  2:112360‑M2/22‑1 (MQ=255)
                                                                                                                                      ttttatttgatgtCTGGCAGTTCCCTACTCTCGCa                                                                                                                         >  1:112360‑M2/14‑35 (MQ=255)
                                                                                                                                           tttgatgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCt  <  1:20653‑M2/141‑1 (MQ=255)
                                                                                                                                               atgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                                                                            >  4:247563‑M2/5‑39 (MQ=255)
                                                                                                                                               atgtCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                                                                            <  3:247563‑M2/35‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                            
CGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCT  >  NC_000913/3423525‑3423812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.