BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4403997 =	97 (1.180)	4 (0.050)	4/256	NT	4.2%	coding (698/1005 nt)	hflC	HflB protease modulator specific for phage lambda cII repressor
*	?	NC_000913	4404016 =	89 (1.120)	4 (0.050)	4/256	NT	4.2%	coding (717/1005 nt)	hflC	HflB protease modulator specific for phage lambda cII repressor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

ATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTA  >  NC_000913/4403876‑4404164

atcaACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAgg                                                                                                                                              >  8:2832/1‑149 (MQ=255)

 tcaACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGt                                                                                                                                             <  2:361943/149‑1 (MQ=255)

 cttcggcatcgccttcaccacgcatgatgcggccctgacgctcagcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaagCGGTAGCGCGTCGTCACCGTTCACAAg                                                                                                                                               >  7:295027‑M1/121‑147 (MQ=255)

   aaCCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCa                                                                                                                                           <  8:133724/149‑1 (MQ=255)

         aaCAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGgaag                                                                                                                                      >  1:175843/1‑148 (MQ=255)

           cAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGaagaag                                                                                                                                   <  6:21739/149‑1 (MQ=255)

             gTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                                                 >  6:219525/1‑149 (MQ=255)

              tATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                                                 >  7:237313/1‑148 (MQ=255)

              tATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                                                 >  2:153435/1‑148 (MQ=255)

                  gcggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaa                                                                                                                             <  4:340379/148‑1 (MQ=255)

                     gcgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACt                                                                                                                         >  2:45388/1‑149 (MQ=255)

                       gcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgc                                                                                                                       <  3:12108/149‑1 (MQ=255)

                           ggTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgcgcg                                                                                                                    <  6:200616/148‑1 (MQ=255)

                           ggTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgcgc                                                                                                                     <  3:232547/147‑1 (MQ=255)

                             tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                                                 >  1:42949/1‑149 (MQ=255)

                             tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                                                 <  7:2832/149‑1 (MQ=255)

                             tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                                                 >  1:310651/1‑149 (MQ=255)

                             tATTGAAGTCGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                                                 >  2:110574/1‑149 (MQ=255)

                               ttGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                                               >  1:35921/1‑149 (MQ=255)

                                 gAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                                               <  3:206984/147‑1 (MQ=255)

                                 gAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACt                                                                                                               >  4:206984/1‑147 (MQ=255)

                                 gAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGc                                                                                                             >  1:307651/1‑149 (MQ=255)

                                     ttGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGAc                                                                                                         <  7:158032/149‑1 (MQ=255)

                                     ttGTCGATGTGCGTATCAAGCAGATCAACCTGCCAACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTCGCGCGTCGTCACCCTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGAc                                                                                                         >  7:286681/1‑149 (MQ=255)

                                     ttGTCGATGTGAGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCCGTAGCGCGTCGTCACCGTTCACAACGTCAGGAAGAAGCCGAAAAACTGCGCGCGACTGCCGAc                                                                                                         >  1:47027/1‑149 (MQ=255)

                                           aTGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGaa                                                                                                   <  8:280377/149‑1 (MQ=255)

                                           aTGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGaa                                                                                                   <  3:82295/149‑1 (MQ=255)

                                              tgCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGt                                                                                                 <  6:129928/148‑1 (MQ=255)

                                              gcttctgccagcgttctggtcacttcatagtcggcagtcgcgcgcagtttttccgcttcttcctgaccttgtgaaCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaa                                                                                                                             >  8:304854‑M1/76‑120 (MQ=255)

                                                cGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                                              <  4:308897/149‑1 (MQ=255)

                                                cGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCAGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                                              <  2:81371/149‑1 (MQ=255)

                                                  tATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                                              >  1:246690/1‑147 (MQ=255)

                                                  tATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCa                                                                                            <  3:222397/149‑1 (MQ=255)

                                                   aTCAAGCAGATCAACCTGCCGCCCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCTTCACCGTTCCCAAGGTCAGGAAGCAGCGGAAACACTGCGCGCGACTGCCCACTATGAAGTGAc                                                                                              >  5:316552/1‑146 (MQ=255)

                                                   aTCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgc                                                                                                                       <  4:323989/121‑1 (MQ=255)

                                                      aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGCCCAGAAc                                                                                        >  8:75657/1‑149 (MQ=255)

                                                      aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGaa                                                                                         <  5:121473/148‑1 (MQ=255)

                                                      aaGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAAc                                                                                        >  5:192927/1‑149 (MQ=255)

                                                         cAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCt                                                                                     <  1:211863/149‑1 (MQ=255)

                                                          aGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                                                    >  5:341291/1‑149 (MQ=255)

                                                            aTCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                                              <  3:177762/137‑1 (MQ=255)

                                                            aTCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAc                                                                                              >  4:177762/1‑137 (MQ=255)

                                                                aCCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAg                                                                                >  5:28784/1‑147 (MQ=255)

                                                                 ccTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAg                                                                             >  1:182911/1‑149 (MQ=255)

                                                                       gaccgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGc                                                                       <  8:211055/149‑1 (MQ=255)

                                                                       gaccgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGc                                                                       >  2:186146/1‑149 (MQ=255)

                                                                       gaccgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGc                                                                       <  2:35921/149‑1 (MQ=255)

                                                                          cgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                                                     >  8:327813/1‑148 (MQ=255)

                                                                          cgaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                                                     >  8:180135/1‑148 (MQ=255)

                                                                           gaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                                                   <  7:327813/149‑1 (MQ=255)

                                                                           gaAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                                                   <  2:246690/149‑1 (MQ=255)

                                                                              gtgtCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAggg                                                                <  1:153435/149‑1 (MQ=255)

                                                                                   tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCa                                                                                 >  6:265129/1‑127 (MQ=255)

                                                                                   tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCa                                                                                 <  5:265129/127‑1 (MQ=255)

                                                                                   tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGca                                                           >  5:350012/1‑149 (MQ=255)

                                                                                   tGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTCAGCGTCAGGGCCGca                                                           >  3:132379/1‑149 (MQ=255)

                                                                                    gAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGa                                                                                                          <  4:102839/101‑1 (MQ=255)

                                                                                     aaGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcat                                                          <  7:105084/148‑1 (MQ=255)

                                                                                      aGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatca                                                        >  7:216896/1‑149 (MQ=255)

                                                                                      aGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatca                                                        <  1:11176/149‑1 (MQ=255)

                                                                                       gCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGcatcat                                                       <  1:45388/149‑1 (MQ=255)

                                                                                             tACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGACCGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                                                 >  5:241548/1‑149 (MQ=255)

                                                                                             tACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                                                 >  1:24590/1‑149 (MQ=255)

                                                                                              aCAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                                                    >  5:83542/1‑113 (MQ=255)

                                                                                              aCAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTg                                                                                    <  6:83542/113‑1 (MQ=255)

                                                                                               tttccgcttcttcctgaccttgtgaacggtgacgacgcgctaccgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGc                                                                            <  7:304854‑M2/75‑1 (MQ=255)

                                                                                               tttccgcttcttcctgaccttgtgaacggtgacgacgcgctaccgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGc                                                                            >  8:304854‑M2/46‑120 (MQ=255)

                                                                                               cAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtggt                                                >  4:249859/1‑148 (MQ=255)

                                                                                                 aCCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGGCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGaa                                             <  7:350509/149‑1 (MQ=255)

                                                                                                  ccGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTCAGCGTCAGGGCCGCATCATGCGTGGTGAAg                                            <  4:132379/149‑1 (MQ=255)

                                                                                                   cGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAgg                                           <  2:310651/149‑1 (MQ=255)

                                                                                                       tGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGa                                        <  2:175843/148‑1 (MQ=255)

                                                                                                              cGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGCAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag                                >  8:351624/1‑149 (MQ=255)

                                                                                                               gAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag                                >  6:148988/1‑148 (MQ=255)

                                                                                                                cttgtgaacggtgacgacgcgctaccgcTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag                                >  7:295027‑M2/29‑147 (MQ=255)

                                                                                                                aGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagca                              <  2:307651/149‑1 (MQ=255)

                                                                                                                aGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAag                                >  3:230998/1‑147 (MQ=255)

                                                                                                                   gTGAAGCGGTAGCGCGTCGTGACGGTTCACAAGGTTAGGAAGATGCGGAAAAACTGCGTGCGACTGCCGTCTTTGAAGTGTCCTGAACGATGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagcagcg                           <  6:316552/149‑2 (MQ=255)

                                                                                                                     gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa                                 >  3:210578/1‑141 (MQ=255)

                                                                                                                     gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa                                 <  4:210578/141‑1 (MQ=255)

                                                                                                                     gAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCa                          >  1:333120/1‑148 (MQ=255)

                                                                                                                      aaGCGGAAGCGCGGCGTCACCGTTCACAAGGTCAGGCAGAAGCGCAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCGGGCAGAAGCTGAGCGGCAGGGCCGCATCATGCGTGGGGAAGGCGATGCCGAAGCAGCCaaa                        <  5:99533/149‑1 (MQ=255)

                                                                                                                           tgacgacgcgctaccgcTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGtt                   <  8:295027‑M2/132‑1 (MQ=255)

                                                                                                                           GTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGtt                   >  6:350012‑M1/1‑149 (MQ=255)

                                                                                                                            TAGAGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCTACTATGAAGTGACCAGAACGCTGGCATAAGCTGAGCGTCAGGGACGCATCAAGCGGGGTGAAGGCGATGCCGAAGCAGCCAAACTGttt                  <  2:345324‑M1/149‑1 (MQ=255)

                                                                                                                                gcgTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCt               >  3:39631/1‑148 (MQ=255)

                                                                                                                                  gtcgtcACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGAt            >  4:112921/1‑149 (MQ=255)

                                                                                                                                      tcACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                                                 >  8:229666/1‑108 (MQ=255)

                                                                                                                                      tcACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtgg                                                 <  7:229666/108‑1 (MQ=255)

                                                                                                                                      tcACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCAt        <  1:110574/149‑1 (MQ=255)

                                                                                                                                       cACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCAtt       >  5:127398/1‑149 (MQ=255)

                                                                                                                                        accgTTCACAAGGTCAGGGAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCACATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCaa                         <  5:132358‑M2/126‑1 (MQ=255)

                                                                                                                                        accgTTCACAAGGTCAGGGAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCACATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCaa                         >  6:132358‑M2/5‑130 (MQ=255)

                                                                                                                                        accgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                                                   >  8:268064‑M2/5‑88 (MQ=255)

                                                                                                                                        accgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                                                   <  7:268064‑M2/84‑1 (MQ=255)

                                                                                                                                         ccgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCAtt       >  7:216463‑M2/4‑147 (MQ=255)

                                                                                                                                         ccgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCa     <  8:216463‑M2/146‑1 (MQ=255)

                                                                                                                                          cgTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAg    >  3:167926‑M2/3‑149 (MQ=255)

                                                                                                                                            ttCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGGATTCAGt   >  2:92738/1‑148 (MQ=255)

                                                                                                                                            ttCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTa  <  8:216896/149‑1 (MQ=255)

ATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTA  >  NC_000913/4403876‑4404164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.