| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,586,450 | C→A | 6.1% | L240L (CTC→CTA) | narQ → | sensory histidine kinase in two‑component regulatory system with NarP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,586,450 | 0 | C | A | 6.1% | 308.8 / 2.8 | 98 | L240L (CTC→CTA) | narQ | sensory histidine kinase in two‑component regulatory system with NarP |
| Reads supporting (aligned to +/- strand): ref base C (50/41); new base A (2/5); total (52/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
AACACGGGCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCGGTGAA > NC_000913/2586302‑2586597 | aaCACGGGCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTAGGTCTGCTTTCAAAAACCTTTAACCAGCTGTCGCGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTCGAAGAAAAGACCAGCGAtctc > 6:240416/1‑149 (MQ=255) ggCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAg < 2:364440/149‑1 (MQ=255) gCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGTATTTTTAAGTATAAGTATAGACCCGAGATCTACACGAgg < 8:231104/149‑1 (MQ=255) aGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGCTGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGcc < 5:171823/149‑1 (MQ=255) aGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGc > 5:222064/1‑148 (MQ=255) ttCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAgg > 8:203751/1‑145 (MQ=255) tgcGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAgg < 7:203751/143‑1 (MQ=255) gACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGC‑AAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAg > 4:195239/1‑140 (MQ=255) gACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGC‑AAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAg < 3:195239/140‑1 (MQ=255) tCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGcgtcg > 1:86329/1‑149 (MQ=255) tCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGcgtcg > 3:82764/1‑149 (MQ=255) gccgccgcTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGcgtcgt < 1:4014/148‑1 (MQ=255) gccgcTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGACCAAGCGTCGTCTg > 6:1166/1‑148 (MQ=255) cggtGGCTACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGCGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAg < 7:48871/146‑1 (MQ=255) ggATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCATTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGgtgt < 8:343000/149‑1 (MQ=255) ggATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCCCGAGGCCAAGCGTCGTCTGGAGgtgt > 2:250272/1‑149 (MQ=255) ccAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGa > 1:107080/1‑139 (MQ=255) ccAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGa < 2:107080/139‑1 (MQ=255) cAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTAt > 8:75323/1‑148 (MQ=255) cAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTAt > 4:170416/1‑148 (MQ=255) aaCCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGAGATCTACACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCa < 4:206929/149‑1 (MQ=255) ccTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAgt < 7:75323/149‑1 (MQ=255) cGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCg > 2:40478/1‑149 (MQ=255) cGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCg > 4:39944/1‑149 (MQ=255) tgcgcgtGGTCTGCTTGCAAAAACCTTTACCCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGTATTTTTAAGTATAAGAAAAGACCCGAGATCTACACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAgg < 2:86329/143‑1 (MQ=255) aGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGgcg > 6:153341/1‑149 (MQ=255) gCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGCAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGgcgc > 2:163443/1‑149 (MQ=255) ttGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCt > 7:371573/1‑148 (MQ=255) ttGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCt > 7:235553/1‑148 (MQ=255) ggTCGGCTTGCAACAACCTTTAACCAGAGGTCGCGCGAGCTGCATACATTGTACCGGTCGCTGGAAGCGTCAGGAGAAGAACAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGaa < 5:240416/149‑1 (MQ=255) tCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAaca < 3:64724/149‑1 (MQ=255) cTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAacac > 8:309819/1‑149 (MQ=255) tGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAacac > 3:96803/1‑148 (MQ=255) tGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGACGCCAAGCGTCGTCTGGAGGTCTTGTATAAGTGTTCTCAGGCGCTGAacac > 2:15189/1‑148 (MQ=255) gCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAacac > 4:212278/1‑147 (MQ=255) ctagCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCCCGATCTCCACGAGGCCAAGCGTCGTCTGGATGTGTTGTATCAGTCTTCGCAGGCGCTGAACACt < 5:169252/144‑1 (MQ=255) cTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGAACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGAGCTCCACGAGGCCAAGCGTCGTCTGGAGGTGATGTATCAGTGTTCGCAGGCGCTGAACACTAg < 5:187786/149‑1 (MQ=255) gCAAACACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCTTTTTTTTTTTAATTATAAGTATAGAACCGAGATCTACACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGc < 2:65847/147‑1 (MQ=255) gCAAAAACCTTTAACCCGATGTCGAGCGAGCTGCATAAATTGTACCGGTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGc < 1:117361/147‑1 (MQ=255) cAAAAACCTGTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGGCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGcgtc > 7:135296/1‑102 (MQ=255) aaaaaCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGGCGTCTGGAGGTGTTGTATCAGTGTTCGCATGCTCTGCACACTatc > 2:296593/1‑143 (MQ=255) aaaCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGAtt > 3:67003/1‑149 (MQ=255) aaaCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGAtt > 7:326680/1‑149 (MQ=255) aaaCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGAtt > 6:88412/1‑149 (MQ=255) aaCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGAtt > 6:3982/1‑148 (MQ=255) aCCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGAGTAAGTAGAAGAAAAGAACCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGa < 8:171272/149‑1 (MQ=255) ccTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGAt < 3:170416/149‑1 (MQ=255) ccTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGAt < 3:302765/149‑1 (MQ=255) ccAGATGCCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCAtt > 6:40442/1‑149 (MQ=255) aGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGt > 2:39341/1‑149 (MQ=255) agcgagcTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCa > 4:64375/1‑149 (MQ=255) gcgagcTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCa > 4:74782/1‑148 (MQ=255) cTGCATAAATTGTACCGTTCGCTGGAAGCGTAAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATAtttt < 8:326680/149‑1 (MQ=255) cTGCATAAATTGTACCGTTCGCTGGAAGAGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATAtttt < 3:39944/149‑1 (MQ=255) tGCATAAATTGTACCGTTCGCTTTAATTGTAATTATAAGTATAGAACCGAGATCTACACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGAt < 2:32600/125‑1 (MQ=255) tGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGAt > 1:32600/1‑125 (MQ=255) gCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCAtt > 4:283895/1‑131 (MQ=255) gCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCAtt < 3:283895/131‑1 (MQ=255) gCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTg > 4:133991/1‑148 (MQ=255) cATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCa < 1:39341/149‑1 (MQ=255) aTAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTg > 5:79085/1‑146 (MQ=255) tAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGTAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGa < 8:235553/149‑1 (MQ=255) tAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGa < 5:88412/149‑1 (MQ=255) ttGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCa < 5:71249/143‑1 (MQ=255) ttGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCa > 6:71249/1‑143 (MQ=255) ttGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGt < 7:70850/149‑1 (MQ=255) ttGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGt > 7:327052/1‑149 (MQ=255) tACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTcg < 8:371573/149‑1 (MQ=255) tACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTcg > 4:110945/1‑149 (MQ=255) ccGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCa < 5:312138/78‑1 (MQ=255) ccGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTACACGAGTCAAATCGTCTTCTGGAGGTGTTTTATCa > 6:312138/1‑78 (MQ=255) cGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGa > 2:239829/1‑149 (MQ=255) gtGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATg > 1:115096/2‑148 (MQ=255) tGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAg < 6:182037/47‑1 (MQ=255) tGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAg > 5:182037/1‑47 (MQ=255) gAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAg < 1:40478/148‑1 (MQ=255) gAAGAGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGc < 4:230648/149‑1 (MQ=255) gTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTc < 1:148180/131‑1 (MQ=255) gTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTc > 2:148180/1‑131 (MQ=255) gTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCt > 5:199806/1‑148 (MQ=255) tCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGa < 3:74782/149‑1 (MQ=255) cAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTg < 7:88420/126‑1 (MQ=255) aGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGaa > 3:298130/1‑148 (MQ=255) gTAGAAGAAAAGCCCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAata > 5:328483/1‑149 (MQ=255) tAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAatat > 5:45941/1‑149 (MQ=255) tAGAAGAAAAGACCAGCGATCTACACGAGGCCAAGCGTCGTCTTGAGGTGTTTTATCAGAGTTCGCAGGAGCTCAACACTACCAAGAATGATGTGAATTGTTTCCGCAATATTTTGCAGATTGTTAGCGACAATGAACAGGCTGAatat > 7:142537/1‑149 (MQ=255) gaagaaAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCt < 4:96803/149‑1 (MQ=255) gaagaaAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGAATGATGTGCATTGTTTCCGCCATATTTTGAAGATTGTTcgc > 7:24932/1‑126 (MQ=255) gaaAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTg > 5:133378/1‑147 (MQ=255) gaaAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGa < 3:212278/149‑1 (MQ=255) aaaaGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAg < 6:222064/149‑1 (MQ=255) gcccggagATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTTTCAGTTTTCGCAGGCGCTGAACACTAGCCAGATTGATGTTGAGTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTaa < 2:100402/142‑1 (MQ=255) aCCCGCGAGCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTAGCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGAGGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTaaa < 1:250272/149‑1 (MQ=255) cccGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAAt < 6:328483/149‑1 (MQ=255) ccGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACTCTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTg < 7:242336/139‑1 (MQ=255) ccGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTg > 8:242336/1‑139 (MQ=255) ccGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCAGTGTTTCCGCGATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATg > 1:64293/1‑149 (MQ=255) cgATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCg < 5:40442/149‑1 (MQ=255) tcCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGAGACAATGAAGAGGCTGAATATCTGGAGTTAAATGTCGGTGa > 4:101483/1‑148 (MQ=255) ccACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCGGTGaa > 3:244755/1‑148 (MQ=255) | AACACGGGCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCGGTGAA > NC_000913/2586302‑2586597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |