Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,560,930 IS5 (+) +4 bp coding (520‑523/831 nt) glpG ← rhomboid intramembrane serine protease

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3560930 =0 (0.000)117 (1.180) 93/280 0.1 100% coding (523/831 nt) glpG rhomboid intramembrane serine protease
?NC_000913 3652036 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 35609330 (0.000)127 (1.280) 86/280 0.1 100% coding (520/831 nt) glpG rhomboid intramembrane serine protease
?NC_000913 = 3653230 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 242 total aligned reads displayed.

ATGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATGGCC  >  NC_000913/3560785‑3561079
                                                                                                                                                    |                                                                                                                                                  
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAg                                                                                                                                                    <  5:196648‑M1/4‑1 (MQ=255)
 tGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGg                                                                                                                                                   <  8:65569‑M1/149‑2 (MQ=255)
 tGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGg                                                                                                                                                   <  4:190980‑M1/149‑2 (MQ=255)
   tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCt                                                                                                                                                  <  5:43318‑M1/6‑1 (MQ=255)
     aCTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaag                                                                                                                                               <  2:51779‑M1/149‑6 (MQ=255)
           acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTAc                                                                                                                                         <  3:77357‑M1/15‑1 (MQ=255)
             gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCg                                                                                                                                       <  4:150993‑M1/17‑1 (MQ=255)
             gATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGAACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaa                                                                                                                                        >  2:333067‑M1/1‑136 (MQ=255)
               cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcgtattcgcaccttccTTAGCTTACCGCTAACGAg                                                                                                                                     <  4:279419‑M1/19‑1 (MQ=255)
               cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAg                                                                                                                                     >  6:409244‑M1/131‑149 (MQ=255)
                  cgTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtc                                                                                                                                  >  6:257414‑M1/1‑131 (MQ=255)
                  cgTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtc                                                                                                                                  >  3:271577‑M1/1‑131 (MQ=255)
                   gTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtcc                                                                                                                                 <  8:39765‑M1/149‑20 (MQ=255)
                    atggcgaagaaacggtctaaataggctgattcaaggcatttaccggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGtt                                                                                                                                <  7:179923‑M1/24‑1 (MQ=255)
                      cGCCACGTAGCCAGACGTATCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccct                                                                                                                               <  5:213520‑M1/148‑22 (MQ=255)
                       gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTATCTTACCGCTACCGAGGCGtttt                                                                                                                              >  6:161439‑M1/123‑148 (MQ=255)
                        cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTc                                                                                                                            >  6:381850‑M1/122‑149 (MQ=255)
                          aCGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaa                                                                                                                                        >  2:217282‑M1/1‑123 (MQ=255)
                               acggtctaaataggctgattcaatgcttttacgggagaaaaaatcggctcaaacatgaattaatgaaatgactgagtctggcgagaagaatttccccgctttttcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCcaccgca                                                                                                                     >  6:23637‑M1/115‑149 (MQ=255)
                               acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCcaccg                                                                                                                       <  1:58344‑M1/33‑1 (MQ=255)
                                ccAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatc                                                                                                                    <  2:187193‑M1/149‑33 (MQ=255)
                                ccAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagat                                                                                                                     >  8:349166‑M1/1‑117 (MQ=255)
                                  aGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCAGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                  >  7:420045‑M1/1‑115 (MQ=255)
                                   gACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                                 >  4:386113‑M1/1‑114 (MQ=255)
                                    aCGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                <  7:133654‑M1/149‑37 (MQ=255)
                                     taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCAccgccg                                                                                                               >  1:215351‑M1/109‑149 (MQ=255)
                                       aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCAccgcc                                                                                                                <  7:27325‑M1/40‑1 (MQ=255)
                                          cccATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatga                                                                                                                        >  1:137252‑M1/1‑107 (MQ=255)
                                          cccATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatga                                                                                                                        <  2:137252‑M1/135‑29 (MQ=255)
                                           ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATac                                                                                                         >  6:128268‑M1/103‑149 (MQ=255)
                                           ccATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACTGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaatgtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                         <  5:64539‑M1/149‑44 (MQ=255)
                                           ccATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCCCATAGCCGCTTACCAGGGCGCTGATAAGCGTAATGACAAGTAGggaaggtgcgaccaagtccctgatatgagatcatgtttgtcat                                                                                                         >  3:202761‑M1/1‑106 (MQ=255)
                                            gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATacc                                                                                                        >  4:24221‑M1/102‑149 (MQ=255)
                                             aTCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                       <  8:431863‑M1/149‑46 (MQ=255)
                                             aTCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                       >  6:109298‑M1/1‑104 (MQ=255)
                                               gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATgcca                                                                                                       <  7:213835‑M1/49‑1 (MQ=255)
                                               gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccacc                                                                                                     <  5:280634‑M1/51‑1 (MQ=255)
                                                attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccacc                                                                                                     >  8:160845‑M1/98‑148 (MQ=255)
                                                aGCGGATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                    <  3:258257‑M1/149‑49 (MQ=255)
                                                 ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGc                                                                                                                                   <  5:398728‑M1/21‑1 (MQ=255)
                                                    cATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                >  6:336250‑M1/1‑97 (MQ=255)
                                                    aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATaccaccac                                                                                                   <  7:155095‑M1/53‑1 (MQ=255)
                                                       gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGc                                                                                             >  6:43318‑M1/91‑149 (MQ=255)
                                                         accacGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaag                                                                                                                                               <  3:390813‑M1/97‑6 (MQ=255)
                                                         accacGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaag                                                                                                                                               >  4:390813‑M1/1‑92 (MQ=255)
                                                         accacGCCAGAAAGCACGCCAATCCACCGCCCGCTGATTTTTAGCTGAACATAGCCGCTTAACAGGGCGCTGAGAAGCTTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgattgtcatctggagccatagaa                                                                                           >  3:335741‑M1/1‑92 (MQ=255)
                                                          ccacGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                          <  5:119994‑M1/149‑59 (MQ=255)
                                                           cacGCCAGAAAGCCCGCCAAACAACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                           >  2:143222‑M1/1‑90 (MQ=255)
                                                            acGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                        <  8:132655‑M1/149‑61 (MQ=255)
                                                             acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTGGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGtt                                                                                        <  7:104450‑M1/64‑1 (MQ=255)
                                                               gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGATATACCACCACAAGAGCAGGTTaaa                                                                                     >  8:300398‑M1/83‑149 (MQ=255)
                                                               gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTaaa                                                                                     >  4:91883‑M1/83‑149 (MQ=255)
                                                                cataaagccCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         <  6:216201‑M1/141‑60 (MQ=255)
                                                                     atatataggctcaaacatgaagaaatgaaattactgagtcagccgagaagaatatcaccgcttattcgcaccttccTTCGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACAACCACCAGAGCAGGTTAAAGAGGat                                                                               >  1:310225‑M1/77‑149 (MQ=255)
                                                                     aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGa                                                                                <  8:17492‑M1/72‑1 (MQ=255)
                                                                        ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgtgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  2:281558‑M1/149‑73 (MQ=255)
                                                                        ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  7:398444‑M1/149‑73 (MQ=255)
                                                                        ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  5:257414‑M1/149‑73 (MQ=255)
                                                                        ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  5:346915‑M1/149‑73 (MQ=255)
                                                                        ccGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                                >  6:27386‑M1/1‑77 (MQ=255)
                                                                          gCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  1:288413‑M1/147‑73 (MQ=255)
                                                                             aaaCCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            >  8:240086‑M1/1‑72 (MQ=255)
                                                                              aaCCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                       >  2:251847‑M1/1‑71 (MQ=255)
                                                                                caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATAAGCATCAGc                                                                     <  3:149405‑M1/83‑1 (MQ=255)
                                                                                 aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGc                                                                     >  3:345238‑M1/65‑147 (MQ=255)
                                                                                  aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGc                                                                     <  8:29097‑M1/83‑1 (MQ=255)
                                                                                      tgaagaattgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGt                                                              >  8:125877‑M1/60‑149 (MQ=255)
                                                                                       gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCagag                                                                                              >  7:186794‑M1/59‑116 (MQ=255)
                                                                                        cGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                            >  8:213349‑M1/1‑61 (MQ=255)
                                                                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGGGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTg                                                             <  7:317654‑M1/91‑1 (MQ=255)
                                                                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGc                                                            >  3:45913‑M1/58‑149 (MQ=255)
                                                                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGc                                                            >  2:298058‑M1/58‑149 (MQ=255)
                                                                                         gCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                           <  1:143222‑M1/149‑90 (MQ=255)
                                                                                         gCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatctttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                           <  7:162905‑M1/149‑90 (MQ=255)
                                                                                            gAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAACCGAAATGACAATTAGggaacgtgcgaacaagtcaaagatatgagatcatgttagtcatctggatccatagaacagctttaatcaagaga                                                                          >  6:365827‑M1/1‑57 (MQ=255)
                                                                                                aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAAcgc                                                    <  2:197252‑M1/100‑1 (MQ=255)
                                                                                                             agccgagaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTaa                                       <  6:197000‑M1/113‑1 (MQ=255)
                                                                                                              gCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                >  1:94429‑M1/1‑39 (MQ=255)
                                                                                                              gCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                <  2:94429‑M1/123‑85 (MQ=255)
                                                                                                                  cTTAACAGGGCGCTGATAAGTGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                            >  1:365345‑M1/1‑35 (MQ=255)
                                                                                                                  cTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                         >  3:307029‑M1/1‑35 (MQ=255)
                                                                                                                  cTTAACAGGGCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                         <  4:307029‑M1/110‑76 (MQ=255)
                                                                                                                  agaagaatttccccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCTCCACCAGAGCAGGTTAAAGAGGATATGCAGCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCa                                  >  1:242228‑M1/32‑149 (MQ=255)
                                                                                                                        aGGGCGCTTATAAGCGTAATGAAAATTAGggaaggtgcgaccaagtcccttatatgagatcatgtttgtcatcttgtgccatacaacatgtttcatcatgagtcatccacttaccatcgccgacagtgaattcagcagtaagcgccgtc                            <  6:77045‑M1/149‑121 (MQ=255)
                                                                                                                         gggCGCTGATAAGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc                                  >  1:191007‑M1/1‑28 (MQ=255)
                                                                                                                              ccgcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAAttt                      <  8:137889‑M1/130‑1 (MQ=255)
                                                                                                                                gcttattcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCa                    >  7:29097‑M1/18‑149 (MQ=255)
                                                                                                                                   aaGCGTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                          >  1:415332‑M1/1‑18 (MQ=255)
                                                                                                                                     ttcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAgtgt                >  3:189795‑M1/13‑148 (MQ=255)
                                                                                                                                     ttcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGtt               <  4:346511‑M1/137‑1 (MQ=255)
                                                                                                                                      tcgcaccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTg              <  5:176230‑M1/138‑1 (MQ=255)
                                                                                                                                       gTAATGACAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga             <  7:349166‑M1/149‑136 (MQ=255)
                                                                                                                                         caccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGAt           <  1:187130‑M1/141‑1 (MQ=255)
                                                                                                                                         caccttccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGAt           <  1:227022‑M1/141‑1 (MQ=255)
                                                                                                                                             aCAATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc        <  5:93678‑M1/148‑141 (MQ=255)
                                                                                                                                               ccTTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCa                    >  8:189357‑M1/3‑134 (MQ=255)
                                                                                                                                                aTTAGggaaggtgcggacaagtccctgatatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcagcttcccttcgccgacagtgaattcagcagtacgcgccgtcagaccagaaaggagattttcttgt    >  4:394532‑M1/1‑5 (MQ=255)
                                                                                                                                                aTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcataatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt    <  5:248686‑M1/149‑145 (MQ=255)
                                                                                                                                                 ttAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc   >  1:128852‑M1/1‑4 (MQ=255)
                                                                                                                                                 ttAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGAGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATggc   >  1:382512/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
ATGCCACTTTGCGGATCGCGTTCGCCACGTAGCCAGACGTAGCCCATCAGCGCATACACCACGCCAGAAAGCCCGCCAAACCACGGCCCGCTGAATTTTTGCTGCACATAGCCGCTTAACAGGGCGCTGATAAGCGTAATGACAATTAGCTTACCGCTACCGAGGCGTTTTTCCACCGCACCGCCGAGATACCACCACCAGAGCAGGTTAAAGAGGATATGCATCAGCGAGAAGTGCATTAACGCGTGGGTGAAGTAACGCCAGAACTCAAATTTCAGTGTTGGATCGAATGGCC  >  NC_000913/3560785‑3561079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.