New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 340887081 (0.930)4 (0.050) 3/242 NT 4.9% coding (1264/1452 nt) panF pantothenate:sodium symporter
?NC_000913 = 3408895 81 (0.990)coding (1289/1452 nt) panF pantothenate:sodium symporter
Rejected: Frequency below/above cutoff threshold.

CGGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3408715‑3408870
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaacgATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGCAAGCAGCA  <  NC_000913/3408895‑3408748
                                                                                                                                                                                                                                                                                                                
CGGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGC                                                                                                                                                             >  8:220570/1‑149
 GGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGC                                                                                                                                                             <  5:221374/148‑1
             GTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGC                                                                                                                                                           >  5:19082/1‑138
             GTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGC                                                                                                                                                           <  6:19082/138‑1
                                         GCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGC                                                                                                                      <  1:98707/147‑1
                                          CCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGC                                                                                                                    <  6:218052/148‑1
                                                      CGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGC                                                                                                                    <  1:226388/136‑1
                                                      CGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGC                                                                                                                    >  2:226388/1‑136
                                                                                                                                                    CGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGCA         <  4:285168/149‑1
                                                                                                                                                    CGCCAACGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGC          >  7:223123/1‑148
                                                                                                                                                          CGATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGCAAGCAG    >  7:173830/1‑148
                                                                                                                                                           GATCATCGCAGTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGCAAGCAGCA  <  7:365832/149‑1
                                                                                                                                                                                                                                                                                                                
CGGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3408715‑3408870
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaacgATCATCGCACTTAGCGCGCCTTTGGCGTTGGCGCGTTCCCAGTAAAGACCCAGCACCAGCGGCCACAGGAAAACGGCTTCCAGCCCACCGAAGGCCAACAAATTCAGCCAGATGATCATTTCTGGCGGCTTCCAGGCGGCAAGCAGCA  <  NC_000913/3408895‑3408748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.