New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1366959 =	62 (0.710)	4 (0.050)	4/244	NT	6.3%	coding (954/978 nt)	pspF	psp operon transcriptional activator
	?	NC_000913	1367004 =	61 (0.740)					coding (909/978 nt)	pspF	psp operon transcriptional activator

ATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAG  >  NC_000913/1366811‑1367103                                                                                                                                                     |                                                                                                                                                 ctttaaacggcgtccgcctgaagacgctatcgccgtttcagaaaccacctcgcttccaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatataaccagaagc                                                                                                                                                  <  7:152349‑M1/1‑1 (MQ=255)  tttaaacggcgtccgcctgaagacgctatcgccgtttcagaaaccacctcgcttacaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatataaccagaagcg                                                                                                                                                 <  3:351249‑M1/2‑1 (MQ=255)    aaTAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcg                                                                                                                                               >  4:33170/1‑149 (MQ=255)     aTAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAAcgcgc                                                                                                                                              >  4:281499/1‑149 (MQ=255)          ccAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                                                         >  7:414943/1‑149 (MQ=255)           cAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACt                                                                                                                                        >  6:161896/1‑149 (MQ=255)               gCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACtgatg                                                                                                                                    <  6:85264/149‑1 (MQ=255)                 aataatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTgatgat                                                                                                                                  <  3:33632/149‑1 (MQ=255)                   taatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGTCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATaa                                                                                                                                <  3:33026/149‑1 (MQ=255)                   taatGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATaa                                                                                                                                <  8:47474/149‑1 (MQ=255)                    gaagacgctatcgccgtttcagaaaccacctcgcttccaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcaggttgcaacaagggaaatataaccagaagCGCGCGGAACTGATGATAAg                                                                                                                               <  1:77043‑M1/20‑1 (MQ=255)                     atGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAg                                                                                                                               <  1:192572/148‑1 (MQ=255)                     atGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGt                                                                                                                              <  7:213183/149‑1 (MQ=255)                      tGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                                                         >  4:162474/1‑137 (MQ=255)                      tGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAAc                                                                                                                                         <  3:162474/137‑1 (MQ=255)                      tGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGtt                                                                                                                             <  3:54622/149‑1 (MQ=255)                          tGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAAcc                                                                                                                         >  6:240191/1‑149 (MQ=255)                                    cgctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAAtt                                                                                                                <  3:164036/148‑1 (MQ=255)                                     gctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCa                                                                                                              <  5:240191/149‑1 (MQ=255)                                      ctTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAg                                                                                                             >  3:179706/1‑149 (MQ=255)                                          aaaccacctcgcttccaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatataaccagaagCGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCcgc                                                                                                         <  2:90435‑M1/42‑1 (MQ=255)                                           cAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAATCATTCACTACGCATCCGGCAAGTTTTAGTGATCAAATTCGCTAAATCTGGTGCTTTTTCAACAACTAGCGGATCTGATTATAAGTTAACCCCAGTAATTAATCcgag                                                                                                        >  1:302775/1‑147 (MQ=255)                                           cAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTaa                                                                                                                  >  6:155116/1‑139 (MQ=255)                                           cAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTaa                                                                                                                  <  5:155116/139‑1 (MQ=255)                                              cacctcgcttccaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatataaccagaagCGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCgcgcgc                                                                                                     >  1:90435‑M1/104‑149 (MQ=255)                                                  gCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCt                                                                                                 >  5:267997/1‑149 (MQ=255)                                                    gcttccaacactgccgctggatttacgtgagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatataaccagaagCGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCt                                                                                                 >  2:77043‑M1/98‑147 (MQ=255)                                                      acgacgTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGtt                                                                                             <  8:414943/149‑1 (MQ=255)                                                      acgacgTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGt                                                                                              >  2:4417/1‑148 (MQ=255)                                                        gacgTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGt                                                                                                                              >  2:390800/1‑114 (MQ=255)                                                        gacgTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGt                                                                                                                              <  1:390800/114‑1 (MQ=255)                                                           gTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATAtt                                                                                        >  8:357244/1‑149 (MQ=255)                                                           gTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGAGGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATAtt                                                                                        >  5:240168/1‑149 (MQ=255)                                                              ttGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTcc                                                                                     <  8:188254/149‑1 (MQ=255)                                                                gATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATGTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGGTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCt                                                                                   >  4:351249/1‑149 (MQ=255)                                                                 aTTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTtata                                                                                          >  7:216305/1‑141 (MQ=255)                                                                 aTTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTtata                                                                                          <  8:216305/141‑1 (MQ=255)                                                                     tttatgCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCttgtt                                                                               <  4:138568/146‑1 (MQ=255)                                                                         tgCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCaaa                                                                          >  4:254798/1‑149 (MQ=255)                                                                         tgCCGAATAAAGCATTCACGCCGCATCCGGCAAGGTGTATTGCTCAACTTCGCTAAAACTGGTGCTTGTTCCACAACGCGCGGACCTGCTGATAAGTTAACCCCAGTAATTc                                                                                                               >  5:281621/1‑112 (MQ=255)                                                                           ccGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACt                                                                        <  5:161896/149‑1 (MQ=255)                                                                                  aaGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTg                                                                  <  2:60898/148‑1 (MQ=255)                                                                                   aGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgca                                                                <  3:281499/149‑1 (MQ=255)                                                                                     cATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgcag                                                               >  5:176572/1‑148 (MQ=255)                                                                                      aTTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgcagc                                                              >  5:286503/1‑148 (MQ=255)                                                                                             ccgcATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCttt                                                      >  1:196820/1‑149 (MQ=255)                                                                                              cgcATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgc                                                                 <  1:104684/137‑1 (MQ=255)                                                                                              cgcATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTgc                                                                 >  2:104684/1‑137 (MQ=255)                                                                                              cgcATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCtttt                                                     <  5:44687/149‑1 (MQ=255)                                                                                                cATCCTGCAAGTTTTATTGCTCAACTTCGCTAAATCTGTTGCTTTTTCAACATCGTGCGTAACTGCTGATAAGTTAAACACAGTATTTCATCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTTAGTTGCAGCAACTCTTTTTc                                                   <  2:302775/149‑1 (MQ=255)                                                                                                    cGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCctgc                                               <  6:176572/149‑1 (MQ=255)                                                                                                       cAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTcc                                                  <  8:221541/143‑1 (MQ=255)                                                                                                       cAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTcc                                                  >  7:221541/1‑143 (MQ=255)                                                                                                         aGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCAt                                          >  8:152349/1‑149 (MQ=255)                                                                                                           ttGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCt                                        >  1:197758/1‑149 (MQ=255)                                                                                                                ttGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAAc                                   <  7:357244/149‑1 (MQ=255)                                                                                                                   cTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTc                                 <  4:179706/148‑1 (MQ=255)                                                                                                                   cTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCa                                <  1:4417/149‑1 (MQ=255)                                                                                                                    tCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCAc                               >  3:203906/1‑149 (MQ=255)                                                                                                                      aaattCGCTAAATCTGGTGCTTTTTCAACAACGCGCTGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCAc                               <  5:33999/144‑1 (MQ=255)                                                                                                                      aaCTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCAc                               <  6:267997/147‑1 (MQ=255)                                                                                                                         ttCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTcc                                                                                     <  3:250177/90‑1 (MQ=255)                                                                                                                         ttCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTaaa                          <  3:83691/149‑1 (MQ=255)                                                                                                                         ttCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTaaa                          >  3:157829/1‑149 (MQ=255)                                                                                                                         ttCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGAGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTaaa                          >  2:177092/1‑149 (MQ=255)                                                                                                                         ttCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGATAACCCCACTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTaaa                          >  1:320639/1‑149 (MQ=255)                                                                                                                                      gttgtttttCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCggg                 <  3:33170/141‑2 (MQ=255)                                                                                                                                      gTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAgtg             >  6:198248/1‑149 (MQ=255)                                                                                                                                        gCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGtt           >  4:220838/1‑149 (MQ=255)                                                                                                                                            tttCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGa        <  3:220838/148‑1 (MQ=255)                                                                                                                                                aacaacGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCg    <  6:286503/148‑1 (MQ=255)                                                                                                                                                aacaacGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATACAGCGGCAGTGTTGGAAGc     >  3:98486/1‑147 (MQ=255)                                                                                                                                                 acaacGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTc                                                   <  7:22101/100‑1 (MQ=255)                                                                                                                                                 acaacGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTc                                                   >  8:22101/1‑100 (MQ=255)                                                                                                                                                 acaacGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAg  >  7:163700/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 ATTAATAGCCCAACGCAATAATGTCTGATGCGCTGCGCTTATCAGGCCTGCAAACGACGTATTGATTATGTATGCCGAATAAAGCATTCACGCCGCATCCGGCAAGTTGTATTGCTCAACTTCGCTAAATCTGGTGCTTTTTCAACAACGCGCGGAACTGATGATAAGTTAACCCCAGTAATTCAGCCGCGCGCTTCTGGTTATATTTCCCTTGTTGCAAACTGAGTTGCAGCAACTCTTTTTCCTGCTGCATCTGAAACTCACGTAAATCCAGCGGCAGTGTTGGAAGCGAG  >  NC_000913/1366811‑1367103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.