BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3775583 =	88 (1.010)	3 (0.040)	3/242	NT	3.5%	coding (12/588 nt)	mtlR	mannitol operon repressor
*	?	NC_000913	3775603 =	84 (1.030)	3 (0.040)	3/242	NT	3.5%	coding (32/588 nt)	mtlR	mannitol operon repressor
Rejected: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

GATGATCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCT  >  NC_000913/3775435‑3775729

gatgatCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAg                                                                                                                                                    >  3:203334/1‑149 (MQ=255)

agaagatttaccgcctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgg                                                                                                                                                    <  2:164485‑M1/1‑1 (MQ=255)

agaagatttaccgcctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgg                                                                                                                                                    >  7:205917‑M1/149‑149 (MQ=255)

agaagatttaccgcctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgg                                                                                                                                                    <  8:248126‑M1/1‑1 (MQ=255)

 gaagatttaccgcctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcggg                                                                                                                                                   <  3:150383‑M1/2‑1 (MQ=255)

 gaagatttaccgcctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcggg                                                                                                                                                   <  3:321707‑M1/2‑1 (MQ=255)

   gatCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGgcg                                                                                                                                                 >  7:89638/1‑149 (MQ=255)

     tCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCa                                                                                                                                               <  3:296943/149‑1 (MQ=255)

       cGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAg                                                                                                                                              <  6:164831/148‑1 (MQ=255)

        gCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGa                                                                                                                                            >  2:262944/1‑149 (MQ=255)

            gCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACAcc                                                                                                                                        <  1:287880/149‑1 (MQ=255)

            gCTCAGGAACTGGCAGCACAGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGCTGGACCAGGCGCAGGACAcc                                                                                                                                        >  1:373807/1‑149 (MQ=255)

               tcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgGGCGCAgg                                                                                                                                             >  8:378485‑M1/134‑141 (MQ=255)

               tcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgGGCGCAgg                                                                                                                                             <  7:378485‑M1/8‑1 (MQ=255)

                aGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTgc                                                                                                                                    >  1:23299/1‑149 (MQ=255)

                aGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTgc                                                                                                                                    <  4:272344/149‑1 (MQ=255)

                   aaCTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGcc                                                                                                                                 >  4:28644/1‑149 (MQ=255)

                        gcagcaCTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGaa                                                                                                                             >  2:26253/1‑148 (MQ=255)

                           tcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgGgcgc                                                                                                                                                >  8:188585‑M1/122‑126 (MQ=255)

                           tcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttatcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgGgcgc                                                                                                                                                <  7:188585‑M1/5‑1 (MQ=255)

                           gcaCTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAAc                                                                                                                         <  7:352153/149‑1 (MQ=255)

                            caCTGATCGCTTACAAAGGTCCGCAGGCGTCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCCCAGGACACCCTGCGCCCGAATAACa                                                                                                                        >  6:24675/1‑149 (MQ=255)

                               tGATCGCTGACAGAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGAt                                                                                                                     >  5:131877/1‑149 (MQ=255)

                               tGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGAt                                                                                                                     >  7:222523/1‑149 (MQ=255)

                                  tCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGt                                                                                                                  <  3:210789/149‑1 (MQ=255)

                                    gCTTACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATTGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTc                                                                                                                 <  4:203334/148‑1 (MQ=255)

                                    gCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCa                                                                                                                <  2:311194/149‑1 (MQ=255)

                                       gACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAAGAACAGATTGGCAGa                                                                                                              >  5:100200/1‑148 (MQ=255)

                                        aCAAAGGTCCGCAGTCGGCGCTGGCACAGATTTCCTGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGata                                                                                                            <  6:233956/149‑1 (MQ=255)

                                        aCAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGa                                                                                                              <  8:386986/147‑1 (MQ=255)

                                         cAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGAtt                                                                                                                    <  3:331475/140‑1 (MQ=255)

                                         cAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGAtt                                                                                                                    >  4:331475/1‑140 (MQ=255)

                                          aaaGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTc                                                                                                                 <  6:34548/142‑1 (MQ=255)

                                          aaaGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTc                                                                                                                 >  5:34548/1‑142 (MQ=255)

                                          aaaGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATg                                                                                                          >  4:177387/1‑149 (MQ=255)

                                          aaaGGTCCGCAGGAGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGAtt                                                                                                                    <  1:205272/139‑1 (MQ=255)

                                            aGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCa                                                                                                        <  5:242720/149‑1 (MQ=255)

                                              gTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAgg                                                                                                      >  4:23734/1‑149 (MQ=255)

                                                   cAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAAc                                                                                                                         <  1:149533/125‑1 (MQ=255)

                                                   cAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAAc                                                                                                                         >  2:149533/1‑125 (MQ=255)

                                                    aGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGcaacaa                                                                                                >  4:171512/1‑149 (MQ=255)

                                                    aGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGcaacaa                                                                                                >  1:45675/1‑149 (MQ=255)

                                                        ggcgCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATgg                                                                                             >  1:2174/1‑148 (MQ=255)

                                                        ggcgCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGa                                                                                            <  1:26253/149‑1 (MQ=255)

                                                        ggcgCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGa                                                                                            <  3:23734/149‑1 (MQ=255)

                                                         gcgcTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGaa                                                                                           <  3:28644/149‑1 (MQ=255)

                                                          cgcTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAAc                                                                                          <  6:131877/149‑1 (MQ=255)

                                                            cTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACaa                                                                                        >  3:297264/1‑149 (MQ=255)

                                                               gCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAAc                                                                                      <  2:373807/148‑1 (MQ=255)

                                                                 acaGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAAcc                                                                                     >  4:73974/1‑147 (MQ=255)

                                                                 acaGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCa                                                                                   <  3:73974/149‑1 (MQ=255)

                                                                   aGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAgg                                                                                                      >  1:151553/1‑128 (MQ=255)

                                                                   aGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAgg                                                                                                      <  2:151553/128‑1 (MQ=255)

                                                                          acgctcaagcacacggttttcaaaggcctgggtttgttccattgttgcctgcatatctgacaatctgttattcgGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAgg                                                                                                      <  5:273661‑M1/47‑1 (MQ=255)

                                                                           ggTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGaa                                                                         <  5:159543/149‑1 (MQ=255)

                                                                            gTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTg                                                                           >  7:230398/1‑146 (MQ=255)

                                                                            gTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTg                                                                           <  8:230398/146‑1 (MQ=255)

                                                                             tCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGaaaa                                                                       <  8:162745/149‑1 (MQ=255)

                                                                             tCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGaaaa                                                                       >  7:117562/1‑149 (MQ=255)

                                                                               ttGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGTACCAGGCGAAGGACACACTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGaaaa                                                                       >  3:72859/1‑147 (MQ=255)

                                                                                 gATTCCAAGAGCGAGGTTGTATCCGAGGCGGTAACAGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAAcc                                                                     <  6:100200/147‑1 (MQ=255)

                                                                                 gATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAAcc                                                                     <  2:237969/147‑1 (MQ=255)

                                                                                  aTGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgt                                                                   <  3:1722/148‑1 (MQ=255)

                                                                                   tGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgtgt                                                                 <  2:387562/149‑1 (MQ=255)

                                                                                         cAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCtt                                                             >  7:311012/1‑147 (MQ=255)

                                                                                           gCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGc                                                         <  3:177387/149‑1 (MQ=255)

                                                                                             gAGCTTGTATCCGAGGCGGTAAATCATTATAAAGAAATGAAAAAATGGAGGACCAGGCGCAGGACAAGCAGCGCCCGAAGAACATATTTTAAGATAGAAAGGCAACAATGTAAAACACCAAGGAATTTGAAAACGGGGTGGTTGAGctg                                                       >  6:6661/1‑147 (MQ=255)

                                                                                              aGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTc                                                      >  7:11266/1‑149 (MQ=255)

                                                                                                      tCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGc                                                               >  4:336134/1‑132 (MQ=255)

                                                                                                      tCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGc                                                               <  3:336134/132‑1 (MQ=255)

                                                                                                      tCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCt                                              >  7:250886/1‑149 (MQ=255)

                                                                                                        cGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTg                                             <  8:117562/148‑1 (MQ=255)

                                                                                                         gAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGcaa                                                                                                   >  6:367665/1‑93 (MQ=255)

                                                                                                         gAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGcaa                                                                                                   <  5:367665/93‑1 (MQ=255)

                                                                                                            gCGGTAACCGCTTATAAAGCAGTGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGc                                                                                >  8:322490/1‑109 (MQ=255)

                                                                                                                    cGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgt                                                                   >  2:202394/1‑114 (MQ=255)

                                                                                                                    cGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgt                                                                   <  1:202394/114‑1 (MQ=255)

                                                                                                                      cTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgtg                                                                  >  3:159131/1‑113 (MQ=255)

                                                                                                                      cTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCgtg                                                                  <  4:159131/113‑1 (MQ=255)

                                                                                                                        tataAAGCAATGCAATAATGGTGGCCCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGc                            >  4:321707/1‑149 (MQ=255)

                                                                                                                            aaGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCttt                         <  4:65720/148‑1 (MQ=255)

                                                                                                                            aaGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCttt                         <  8:311012/148‑1 (MQ=255)

                                                                                                                            aaGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCttt                         <  2:45675/148‑1 (MQ=255)

                                                                                                                            aaGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTc                        <  8:250886/149‑1 (MQ=255)

                                                                                                                                aatgcaatAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGata                                                                                                            <  4:254285/61‑1 (MQ=255)

                                                                                                                                aatgcaatAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGata                                                                                                            >  3:254285/1‑61 (MQ=255)

                                                                                                                                aatgcaatAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGAt                    >  5:190371/1‑149 (MQ=255)

                                                                                                                                  tGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCA                  >  1:164485‑M1/1‑149 (MQ=255)

                                                                                                                                     aataatGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGAt                    >  2:316677/1‑144 (MQ=255)

                                                                                                                                     aataatGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGAt                    <  1:316677/144‑1 (MQ=255)

                                                                                                                                      ataatGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGC              >  4:150383‑M1/1‑149 (MQ=255)

                                                                                                                                       taatGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCC             >  7:248126‑M1/1‑149 (MQ=255)

                                                                                                                                          tggtggACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACTATGGAACTAACCCAGGCCTTTGAATACCGTGTGCTTGAGCGTGTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTc          <  5:24675/149‑1 (MQ=255)

                                                                                                                                                 ccAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCt                                                              <  7:220006/90‑1 (MQ=255)

                                                                                                                                                 ccAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCt                                                              >  8:220006/1‑90 (MQ=255)

                                                                                                                                                 ccAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACC                >  8:110267‑M1/1‑136 (MQ=255)

                                                                                                                                                 ccAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACC                <  7:110267‑M1/136‑1 (MQ=255)

                                                                                                                                                  cAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTc    >  5:76590/1‑147 (MQ=255)

                                                                                                                                                  cAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTc    <  6:76590/147‑1 (MQ=255)

                                                                                                                                                  cAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCt  >  3:265431/1‑149 (MQ=255)

GATGATCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCT  >  NC_000913/3775435‑3775729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.