New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4004137137 (1.570)4 (0.050) 4/246 NT 2.9% coding (42/891 nt) rarD putative chloramphenical resistance permease
?NC_000913 = 4004155 141 (1.700)coding (24/891 nt) rarD putative chloramphenical resistance permease
Rejected: Frequency below/above cutoff threshold.

Only 100 of 161 total aligned reads displayed.

AATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCTGTTCTTCATTGT  >  NC_000913/4003992‑4004285
                                                                                                                                                 |                                                                                                                                                    
aaTAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                                                                                                                     >  1:366891/1‑147 (MQ=255)
aaTAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGAGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                                                                                                                     >  3:244679/1‑147 (MQ=255)
     gACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAg                                                                                                                                              <  8:257572/149‑1 (MQ=255)
     gACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAg                                                                                                                                              <  1:320824/149‑1 (MQ=255)
          cTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                                                                                                                         <  5:160581/149‑1 (MQ=255)
          cTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                                                                                                                         <  3:380376/149‑1 (MQ=255)
           tGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAc                                                                                                                                        >  3:287780/1‑149 (MQ=255)
             gcggcAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                                                                                                                      >  5:207148/1‑149 (MQ=255)
               ggcAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                                                                                                                    >  2:192468/1‑149 (MQ=255)
                 cAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCtg                                                                                                                                  <  8:194225‑M2/149‑3 (MQ=255)
                  aaaTGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCtgc                                                                                                                                 <  3:141059‑M2/149‑4 (MQ=255)
                   aaTTCTCATCAGCACCCACATAAAGAAAAACGACCAGATCCCGAGATGCGGCAGGAGTTCATCGGCGGGCACGTAGTAACTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCtgcc                                                                                                                                >  8:160659‑M2/1‑145 (MQ=255)
                           tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgt                                                                                                                        >  8:308520/1‑149 (MQ=255)
                             aGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgtt                                                                                                                       <  7:308520/148‑1 (MQ=255)
                             aGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgtt                                                                                                                       <  5:75102/148‑1 (MQ=255)
                              gaaacaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCTGTCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACACCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                                                                                                                     <  6:208411/145‑1 (MQ=255)
                              gCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                                                                                                                     >  4:104458/1‑149 (MQ=255)
                                 ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                                                                                                                  >  5:115318/1‑149 (MQ=255)
                                  caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                                                                                                            >  4:380095/1‑138 (MQ=255)
                                  caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                                                                                                                            <  3:380095/138‑1 (MQ=255)
                                  caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                                                                                                                     <  2:229949/145‑1 (MQ=255)
                                   accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                                                                                                                     <  2:341198/144‑1 (MQ=255)
                                   accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                                                                                                                     >  1:341198/1‑144 (MQ=255)
                                     caTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                                                                                                               >  4:312367/1‑148 (MQ=255)
                                      aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                                                                                                             >  1:146542/1‑149 (MQ=255)
                                      aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                                                                                                             >  2:184164/1‑149 (MQ=255)
                                       tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAgggcgtattactcgctcttgccgcttattt                                                                                                                        <  4:351600‑M1/137‑31 (MQ=255)
                                       tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgt                                                                                                                        >  8:283421/1‑137 (MQ=255)
                                       tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgt                                                                                                                        <  7:283421/137‑1 (MQ=255)
                                       tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc                                                                                                            <  7:312800/149‑1 (MQ=255)
                                       tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc                                                                                                            <  1:184164/149‑1 (MQ=255)
                                        aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCACCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                                                                                                           >  6:70355/1‑149 (MQ=255)
                                        aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                                                                                                           >  7:70674/1‑149 (MQ=255)
                                        aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGAGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg                                                                                                           <  2:43867/149‑1 (MQ=255)
                                         aaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg                                                                                                          <  3:104458/149‑1 (MQ=255)
                                         aaGAAAAACGACCAGATCACGCGATGCGTCAGGACTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg                                                                                                          >  1:330002/1‑149 (MQ=255)
                                           gAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg                                                                                                         >  7:366285/1‑148 (MQ=255)
                                           gAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg                                                                                                         >  2:300458/1‑148 (MQ=255)
                                           gAAAAACGACCAGATCACGCGATGAGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCAGCGTTTGTTTTGCATCCATCGGGa                                                                                                        <  4:244679/149‑1 (MQ=255)
                                                  gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa                                                                                                 >  3:161476/1‑149 (MQ=255)
                                                   aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAt                                                                                                >  3:271463/1‑149 (MQ=255)
                                                   aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAt                                                                                                <  5:32628/149‑1 (MQ=255)
                                                      aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAtttt                                                                                             >  8:330233/1‑149 (MQ=255)
                                                            cgcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                                                                                                                          <  2:37486/114‑1 (MQ=255)
                                                            cgcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                                                                                                                          >  1:37486/1‑114 (MQ=255)
                                                            cgcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTg                                                                                       >  4:94497/1‑149 (MQ=255)
                                                               gATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAAt                                                                                         <  4:360302/144‑1 (MQ=255)
                                                                     tCATGATTTCATCGGCGGTCACGTAGTAAATCAACTTGAAGTACGCTGGCCCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAAcagca                                                                              <  6:360620/149‑1 (MQ=255)
                                                                     tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAAcag                                                                                >  6:213837/1‑147 (MQ=255)
                                                                     tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAAcag                                                                                >  5:248403/1‑147 (MQ=255)
                                                                     tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAAcag                                                                                >  7:185949/1‑147 (MQ=255)
                                                                           tttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTAc                                                                        <  3:312367/149‑1 (MQ=255)
                                                                                  ggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCtt                                                                  <  5:185318/148‑1 (MQ=255)
                                                                                   gcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCttt                                                                 >  2:162742/1‑148 (MQ=255)
                                                                                     gggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTAt                                                              <  8:185949/149‑1 (MQ=255)
                                                                                       gCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGt                                                            <  5:213837/149‑1 (MQ=255)
                                                                                         aCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCt                                                          <  3:216035/149‑1 (MQ=255)
                                                                                           gtagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCtt                                                         >  5:41827/1‑148 (MQ=255)
                                                                                           gtagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTc                                                        <  8:70674/149‑1 (MQ=255)
                                                                                           gtagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTc                                                        <  4:161476/149‑1 (MQ=255)
                                                                                               taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAAcc                                                    >  6:176092/1‑149 (MQ=255)
                                                                                                  aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTAc                                                 >  4:44056/1‑149 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTc                                                           >  5:125219/1‑138 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTc                                                           <  6:125219/138‑1 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTAcc                                                <  7:187585/149‑1 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTAc                                                 >  2:299917/1‑148 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTAc                                                 >  8:187585/1‑148 (MQ=255)
                                                                                                   tCAACTTGAAGTACGCTGGCGCTATACACCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTAc                                                 >  2:64037/1‑148 (MQ=255)
                                                                                                      aCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCata                                             <  2:34729/149‑1 (MQ=255)
                                                                                                          gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCAtata                                           <  5:176092/147‑1 (MQ=255)
                                                                                                          gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAgg                                         >  3:92528/1‑149 (MQ=255)
                                                                                                              tACGCTGTCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAggtggc                                     >  6:73799/1‑149 (MQ=255)
                                                                                                              tACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAggtggc                                     >  5:196606/1‑149 (MQ=255)
                                                                                                                 gCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAggtggcggt                                  >  4:222287/1‑149 (MQ=255)
                                                                                                                 gCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAggtggcggt                                  <  1:299917/149‑1 (MQ=255)
                                                                                                                  cTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAggtggcggtg                                 <  1:162742/149‑1 (MQ=255)
                                                                                                                             ccccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCaa                       <  4:92528/148‑1 (MQ=255)
                                                                                                                              cccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAata                     >  8:389299/1‑149 (MQ=255)
                                                                                                                               ccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTAt                                                              >  1:341202/1‑107 (MQ=255)
                                                                                                                               ccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAatat                    <  4:287780/149‑1 (MQ=255)
                                                                                                                               ccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAata                     >  5:227903/1‑148 (MQ=255)
                                                                                                                               ccAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTG‑‑TTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATaa                  <  1:277143/149‑1 (MQ=255)
                                                                                                                                cAAATAAAATAAGCGGCAAGAGCGAGT‑ATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAAtata                   >  8:375014/1‑148 (MQ=255)
                                                                                                                                 aaataaaataAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATaa                  <  7:389299/149‑1 (MQ=255)
                                                                                                                                  aataaaataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGAGGCACTGGCaa                       <  6:302044/143‑1 (MQ=255)
                                                                                                                                  aataaaataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGAGGCACTGGCaa                       >  5:302044/1‑143 (MQ=255)
                                                                                                                                      aaataaGCGGCAAGAGCGAGTAATACGCCCtgccgcttattttatttggggtatagcgccagcgtacttcaagttgatttactacgtgccagccgatgaaatcctgacgcatcgcgtgatctggtcgtttttcttta                         >  3:351600‑M2/1‑30 (MQ=255)
                                                                                                                                      aaataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCata                                             >  6:8464/1‑117 (MQ=255)
                                                                                                                                      aaataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCata                                             <  5:8464/117‑1 (MQ=255)
                                                                                                                                      aaataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCt              <  2:146542/148‑1 (MQ=255)
                                                                                                                                        ataaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCTGtt           <  5:70355/149‑1 (MQ=255)
                                                                                                                                         taaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATATAGCTGttc          >  1:303648/1‑149 (MQ=255)
                                                                                                                                         taaGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCTGttc          <  6:248403/149‑1 (MQ=255)
                                                                                                                                            gCGGCAAGAGCGAGTAATACGCCCtgccgcttattttatttggggtatagcgccagcgtacttcaagttgatttactacgtgcccgccgatgaaatcctgacgcatcgcgtgatctgg                                      >  2:98826‑M2/1‑24 (MQ=255)
                                                                                                                                            gCGGCAAGAGCGAGTAATACGCCCtgccgcttattttatttggggtatagcgccagcgtacttcaagttgatttactacgtgcccgccgatgaaatcctgacgcatcgcgtgatctgg                                      <  1:98826‑M2/118‑95 (MQ=255)
                                                                                                                                              ggCAgggcgtattactcgctcttgccgcttattttatttggggtatagcgccagcgtacttcaagttgagttactacgtgcccgccgatgaactcctgccgcatctcgggatctggtcgtttttctttatgtgggtgctgatgagaatt     >  8:160659‑M1/1‑4 (MQ=255)
                                                                                                                                               gCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGATTTTATGTCTTCAACCTACCATATAGGTGGCGTTGGCACTGGCAATATAAATCTGTTCTTCAtt    >  1:135606/1‑149 (MQ=255)
                                                                                                                                                cAgggcgtattactcgctcttgccgcttattttatttggggtatagcgccagcgtacttcaagttgatttactacgtgcccgccgatgaaatcctgacgcatcgcgtgatctggtcgtttttctttatggtggtgctgatgagcatttg   <  8:312800‑M1/149‑148 (MQ=255)
                                                                                                                                                cAgggcgtattactcgctcttgccgcttattttatttggggtatagcgccagcgtacttcaagttgatttactacgtgcccgccgatgaaatcctgacgcatcgcgtgatctggtcgtttttctttatggtggtgctgatgagcatttg   >  2:366891‑M1/1‑2 (MQ=255)
                                                                                                                                                 aaGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCTGTTCTTCATtgt  <  1:206041/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
AATAGGACCACTGGCGGCAAATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATTGGTAACAGCAGTTTACCTGCTTTTATGTCTTCAACCTACCATATAGGTGGCGGTGGCACTGGCAATATAAAGCTGTTCTTCATTGT  >  NC_000913/4003992‑4004285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.