New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2878320 =	32 (0.760)	6 (0.150)	6/254	4.4	15.5%	intergenic (+702/+249)	iap/ygbF	aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease
	?	NC_000913	2878338 =	35 (0.880)					intergenic (+720/+231)	iap/ygbF	aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGTATACATT  >  NC_000913/2878196‑2878479                                                                                                                                               |                                                                                                                                              aTCCCCCCGCGCGCGGGGAACCCGCGACCGCGCAGAACTACCAGACCCGAGCCCAACGGCTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGc                                                                                                                                         <  5:974/149‑1 (MQ=255)           gcgcGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGc                                                                                                                                <  1:179129/148‑1 (MQ=255)           gcgcGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCa                                                                                                                               >  5:64382/1‑149 (MQ=255)              cgGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCACGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCa                                                                                                                            >  4:123815/1‑149 (MQ=255)                gggAACTCGCGTCCGCTCATAAATTCCACACCCGATCCAAACGGTTTATCCCCGGTGGCGGGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCAcc                                                                                                                          <  5:169236/149‑1 (MQ=255)                    aCTCGCGAACGCTCAGAAATTCCAGACCCGATCCTAACGGTTTATCCCCGCTGGCGCGGGTAACTCTAAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCttt                                                                                                                       <  6:176288/148‑1 (MQ=255)                      tCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGc                                                                                                                    >  1:208151/1‑149 (MQ=255)                                tCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCg                                                                                                          >  8:167365/1‑149 (MQ=255)                                  aGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCTGGGAACTCTCAACATTATCAATTACACCCGACAGGGAGCCCGGTTTATCCCCGCTGGCGAGGGGAACTCAGAGTGTTAGGCATCACCTTTGGCTTCGGCTGCGGt                                                                                                        >  8:134644/1‑149 (MQ=255)                                         ccAGACCCGATCCAAACGGTTTATCCCCGCTTGCGCGGGGAACTCTCAACATTATCATTTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGTCTGCGGTTTATcc                                                                                                  <  7:134644/148‑1 (MQ=255)                                         ccAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATcc                                                                                                  <  6:64382/148‑1 (MQ=255)                                             aCCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCt                                                                                             <  2:68802/149‑1 (MQ=255)                                                      aaaCGTTTTATCCCCGCTGGCGCTGGGAACTCTCAACATTATCAATTACTACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCgg                                                                                                         <  8:112807/128‑1 (MQ=255)                                                      aaaCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGATTCGGCTGCgg                                                                                                         >  7:112807/1‑128 (MQ=255)                                                                  cccGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGa                                                                        <  2:208151/149‑1 (MQ=255)                                                                      cTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGAAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc                                                                                                           >  8:54944/1‑110 (MQ=255)                                                                      cTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGAAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc                                                                                                           <  7:54944/110‑1 (MQ=255)                                                                                    tctcAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCt                                                      >  2:27284/1‑149 (MQ=255)                                                                                    tctcAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCt                                                      >  1:62191/1‑149 (MQ=255)                                                                                      tcAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGc                                                    >  1:12992/1‑149 (MQ=255)                                                                                            ttATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGc                                              >  1:178683/1‑149 (MQ=255)                                                                                                     aCAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATc                                      <  2:178683/148‑1 (MQ=255)                                                                                                     aCAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATc                                      <  2:12992/148‑1 (MQ=255)                                                                                                       aaCCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGGTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATcccc                                   <  7:167365/149‑1 (MQ=255)                                                                                                                ggAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGcgccagcg                          >  6:189167/1‑142 (MQ=255)                                                                                                                   gCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCgggg                       >  7:4507/1‑149 (MQ=255)                                                                                                                    cccGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCgggg                       >  4:157578/1‑148 (MQ=255)                                                                                                                               cccGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTaa             >  2:139908/1‑147 (MQ=255)                                                                                                                               cccGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGAAACTCTGCGTGAGCGTATCGCCGCGCGTCTGc                                                    >  4:69204/1‑108 (MQ=255)                                                                                                                               cccGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGAAACTCTGCGTGAGCGTATCGCCGCGCGTCTGc                                                    >  4:66600/1‑108 (MQ=255)                                                                                                                               cccGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGAAACTCTGCGTGAGCGTATCGCCGCGCGTCTGc                                                    <  3:69204/108‑1 (MQ=255)                                                                                                                               cccGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGAAACTCTGCGTGAGCGTATCGCCGCGCGTCTGc                                                    <  3:66600/108‑1 (MQ=255)                                                                                                                                   cTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGtat       <  1:27284/149‑1 (MQ=255)                                                                                                                                      gcgcGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGtata      <  2:62191/147‑1 (MQ=255)                                                                                                                                       cgcgGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGTATACAt   <  8:4507/149‑1 (MQ=255)                                                                                                                                        gcgGGGAACTCAGCGTGTTCGGCATCACCTGTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGTATACAtt  >  4:153829/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                              ATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTGAGCGTATCGCCGCGCGTCTGCGAAAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGTATACATT  >  NC_000913/2878196‑2878479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.