| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2035297 | 73 (0.900) | 4 (0.050) | 3/238 | NT | 6.0% | intergenic (+54/‑538) | yedS/hchA | pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone |
| ? | NC_000913 | = 2035305 | 59 (0.800) | intergenic (+62/‑530) | yedS/hchA | pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2035140‑2035297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAG < NC_000913/2035305‑2035160 TTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGC > 1:135343/1‑149TTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGC < 7:169823/149‑1 TGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTTCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGTCGTGTTACTGTAAAACTGAACACTAGCC > 5:127082/1‑149 GATTACAAAATCAACCTGCTGGACAACGACGATGACTTATACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCT > 5:340530/1‑149 ATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTG < 4:165231/149‑1 ATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCT < 8:232562/148‑1 TTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCT > 3:312751/1‑147 CAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTT > 1:347556/1‑149 AAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTC > 4:8402/1‑149 GATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT > 6:29768/1‑123 GATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGT < 5:29768/123‑1 AATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACA < 2:80182/92‑1 AATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACA > 1:80182/1‑92 AATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA > 4:105483/1‑72 AATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGATGAGGGACGAACTCA < 3:105483/72‑1 GCCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCG < 6:79133/149‑1 CCTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGT > 2:137884/1‑149 CTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTT < 2:41561/149‑1 CTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTT > 6:266069/1‑149 CTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAA > 5:166714/1‑77 CTGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAA < 6:166714/77‑1 TGAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTG > 6:340530/1‑149 GAGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGT > 1:373537/1‑149 AGTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTG < 8:323203/147‑1 GTTCGATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTC > 6:45754/1‑148 GATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAG > 1:111921/1‑147 TTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2035140‑2035297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcctgagttcgATGAGGGACGAACTCAGGCTAGTGTTCAGTTTTACAGTAACACGCCGCAGCGAGTTGACTGATTAGAACTGGTAGACTAAGCCCACAGCAACGATATCATCGGTAGCGATGCCGTTTGCTTCGTAGAAGTCATCGTCGTTGTCCAG < NC_000913/2035305‑2035160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |