New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2291337NA (NA)4 (0.050) 4/244 NT NA noncoding (185/199 nt) RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site
?NC_000913 = 2291342 NA (NA)noncoding (190/199 nt) RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site

Only 100 of 142 total aligned reads displayed.

AAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACGGCTTCGCC  >  NC_000913/2291189‑2291483
                                                                                                                                                    |                                                                                                                                                  
aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGG                                                                                                                                                    >  1:126570‑M1/1‑149 (MQ=255)
aaaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGG                                                                                                                                                    >  8:181519‑M1/1‑149 (MQ=255)
 aaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGc                                                                                                                                                   <  8:290910/149‑1 (MQ=255)
  aCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCCTGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCa                                                                                                                                                  >  7:166607/1‑149 (MQ=255)
  aCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCa                                                                                                                                                  >  8:171106/1‑149 (MQ=255)
   cGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCAt                                                                                                                                                 <  7:78979/149‑1 (MQ=255)
        aaCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAcca                                                                                                                                            >  8:220100‑M2/1‑146 (MQ=255)
        aaCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAcca                                                                                                                                            <  8:239298‑M2/149‑4 (MQ=255)
           tGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAccatcg                                                                                                                                         <  8:90860‑M2/149‑7 (MQ=255)
           tGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAccatcg                                                                                                                                         <  8:257024‑M2/149‑7 (MQ=255)
                   gcgcTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCTCCATCGGGCCTCtt                                                                                                                                 >  2:152842/1‑149 (MQ=255)
                     gcTACTCTTATCAGGCCTCCGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCtttt                                                                                                                               <  1:211442/149‑1 (MQ=255)
                       tACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTttta                                                                                                                             >  2:347245/1‑149 (MQ=255)
                          gCTTAGCAGGCCGACGTGGCTCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTtttattt                                                                                                                          <  6:83231/149‑1 (MQ=255)
                           cTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTtttattta                                                                                                                         >  5:274101/1‑149 (MQ=255)
                               tCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTActct                                                                                                                     >  8:360885/1‑149 (MQ=255)
                                  ggCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCt                                                                                                                  <  1:268172/149‑1 (MQ=255)
                                     cTACGAGGATCGATAAATTAATTGAATTAACACAATTTTGTAGTCCGGATAAGTAGTTCACGCCGCATAAGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCAGATGGCATCACCATAGGGCCTCTTATTAATTACTCTACTtcg                                                                                                               >  8:231316/1‑149 (MQ=255)
                                      tACGTGGATCGATCAATTCATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTgcgg                                                                                                              >  2:206624/1‑149 (MQ=255)
                                         gTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGa                                                                                                           >  7:189434/1‑149 (MQ=255)
                                          tGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGAc                                                                                                          <  8:41720/149‑1 (MQ=255)
                                            gatcgatcAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACaa                                                                                                        <  3:38165/149‑1 (MQ=255)
                                             atcgatcAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACaaa                                                                                                       >  4:332118/1‑149 (MQ=255)
                                              tcgatcAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAAt                                                                                                      <  7:239298/149‑1 (MQ=255)
                                                 atcAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGtt                                                                                                   <  7:279135/149‑1 (MQ=255)
                                                 atcAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGtt                                                                                                   >  3:188020/1‑149 (MQ=255)
                                                      tttATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATc                                                                                              >  4:166660/1‑149 (MQ=255)
                                                         aTTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGcc                                                                                           >  7:41037/1‑149 (MQ=255)
                                                         aTTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGcc                                                                                           >  6:262990/1‑149 (MQ=255)
                                                          ttGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGcc                                                                                           <  7:90860/148‑1 (MQ=255)
                                                             aaTTTACACATTTTTGTAGGCCGGATAAGGCGTTCACGCCTCATACGGCATAAAATTAGCGGACTTTGTCAACAGTCTAGTCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTACTGCGTCGTCAAATGTTGCATCGGCTgcg                                                                                       <  6:138243/149‑1 (MQ=37)
                                                             aaTTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTgcg                                                                                       >  2:69593/1‑149 (MQ=255)
                                                               tttACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTgcgc                                                                                      >  4:89570/1‑148 (MQ=255)
                                                                 tACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGa                                                                                    <  1:292719/148‑1 (MQ=255)
                                                                 tACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGa                                                                                    <  7:257024/148‑1 (MQ=255)
                                                                   cacaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGtt                                                                                                   >  4:3603/1‑131 (MQ=255)
                                                                   cacaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtac                                                                                 >  7:314089/1‑149 (MQ=255)
                                                                   cacaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAta                                                                                  <  1:347245/148‑1 (MQ=255)
                                                                    acaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtact                                                                                <  2:235235/149‑1 (MQ=255)
                                                                    acaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtac                                                                                 >  5:24537/1‑148 (MQ=255)
                                                                     caATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccgg                                                                                                   <  3:216758‑M1/129‑50 (MQ=255)
                                                                     caATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccgg                                                                                                   >  4:216758‑M1/1‑80 (MQ=255)
                                                                     caATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtacta                                                                               >  1:108166/1‑149 (MQ=255)
                                                                      aaTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtactac                                                                              <  7:309917/149‑1 (MQ=255)
                                                                      aaTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGAtactac                                                                              >  7:124712/1‑149 (MQ=255)
                                                                        ttttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGtgatgccatcgggctagactgttgacaaa                                                                                                                       <  4:204453‑M1/106‑30 (MQ=255)
                                                                        ttttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGtgatgccatcgggctagactgttgacaaa                                                                                                                       >  3:204453‑M1/1‑77 (MQ=255)
                                                                          ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGtt                                                                           <  2:108166/148‑1 (MQ=255)
                                                                          ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGtt                                                                           <  3:61619/148‑1 (MQ=255)
                                                                          ttGTAGGCCGGATAAGGCGTTCACGCAGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGtt                                                                           <  7:305118/148‑1 (MQ=255)
                                                                             tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGc                                                                                                 <  8:331198/123‑1 (MQ=255)
                                                                                gCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCAc                                                                    <  1:125487/149‑1 (MQ=255)
                                                                                gCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCAc                                                                    <  3:332118/149‑1 (MQ=255)
                                                                                 ccGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCAcc                                                                   <  8:189434/149‑1 (MQ=255)
                                                                                 ccGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCAcc                                                                   <  3:89570/149‑1 (MQ=255)
                                                                                  cGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCg                                                                  <  3:174529/149‑1 (MQ=255)
                                                                                     aTAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCAc                                                               >  1:59061/1‑149 (MQ=255)
                                                                                      tAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACg                                                              <  6:274101/149‑1 (MQ=255)
                                                                                        aGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGc                                                            <  3:11629/149‑1 (MQ=255)
                                                                                        aGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGc                                                            <  4:188020/149‑1 (MQ=255)
                                                                                         ggCGTTCACGCCGCATACGGCATAAACTAAGCTCACTTTGTCAACAGTCTAGCCCGATGTCATCACCATCGTGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGtt                                                                                                   <  1:228377/109‑1 (MQ=255)
                                                                                          gCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGa                                                          <  8:122715/149‑1 (MQ=255)
                                                                                          gCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGa                                                          <  6:241365/149‑1 (MQ=255)
                                                                                          gCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGa                                                          <  5:229327/149‑1 (MQ=255)
                                                                                          gCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGa                                                          <  7:181519/149‑1 (MQ=255)
                                                                                            gTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGt                                                        <  7:246831/149‑1 (MQ=255)
                                                                                            gTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGt                                                        <  8:124712/149‑1 (MQ=255)
                                                                                            gTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGt                                                        <  8:314089/149‑1 (MQ=255)
                                                                                                   ccgcATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGAC‑AATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTgg                                                <  6:165040/149‑1 (MQ=255)
                                                                                                    cgcATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTgg                                                <  5:262990/149‑1 (MQ=255)
                                                                                                      cATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTgg                                                >  3:288048/1‑147 (MQ=255)
                                                                                                      cATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTgg                                                >  7:355609/1‑147 (MQ=255)
                                                                                                      cATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCa                                              <  2:59061/149‑1 (MQ=255)
                                                                                                       aTCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAg                                             >  1:313868/1‑149 (MQ=255)
                                                                                                        tCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAgg                                            >  1:231416/1‑149 (MQ=255)
                                                                                                         ccGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattg                                                               <  3:216758‑M2/129‑81 (MQ=255)
                                                                                                         ccGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCAccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattg                                                               >  4:216758‑M2/1‑49 (MQ=255)
                                                                                                         ccGGCATAAACTAAGAGCACTTTGTCAACAGTCTAGCCCGCTGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAgg                                            >  6:323619/1‑148 (MQ=255)
                                                                                                             cATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGc                                                            >  8:308527/1‑128 (MQ=255)
                                                                                                              aTAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAagag                                      >  5:292552/1‑149 (MQ=255)
                                                                                                              aTAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAagag                                      <  6:208616/149‑1 (MQ=255)
                                                                                                               tAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGt                                     <  2:313868/149‑1 (MQ=255)
                                                                                                                 aaCTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCAACGGGCCACTTTTAATTTACTCTCCTGCGGAGACAAAAGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGTCGAGTATCGTTTGCAGGTAAGAGta                                    >  7:136714/1‑147 (MQ=255)
                                                                                                                  aCTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCTATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTc                                  <  1:136124/149‑1 (MQ=255)
                                                                                                                   cTACGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCa                                 <  7:360885/149‑1 (MQ=255)
                                                                                                                      aGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAAc                               <  2:231416/148‑1 (MQ=255)
                                                                                                                         gcACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAAcatca                           <  6:24537/149‑1 (MQ=255)
                                                                                                                             tttGTCAACAGTCTAGCCCGATGGCATCAccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaa                                                                  >  3:204453‑M2/1‑29 (MQ=255)
                                                                                                                             tttGTCAACAGTCTAGCCCGATGGCATCAccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaa                                                                  <  4:204453‑M2/106‑78 (MQ=255)
                                                                                                                             tttGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCAtctc                       >  5:126301/1‑149 (MQ=255)
                                                                                                                                    aCAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTa                                                       >  2:304666/1‑110 (MQ=255)
                                                                                                                                          tAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACg          >  4:322715/1‑149 (MQ=255)
                                                                                                                                              ccGATGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattgtgtaaattcaataaattgatcgatccacgtaggcctgataagcgtagcgcatcagg       >  8:86618‑M1/1‑7 (MQ=255)
                                                                                                                                               cGATGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattgtgtaaattcaataaattgatcgatccacgtaggcctgataagcgtagcgcatcaggca     <  8:257024‑M1/149‑144 (MQ=255)
                                                                                                                                               cGATGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattgtgtaaattcaataaattgatcgatccacgtaggcctgataagcgtagcgcatcaggca     <  8:90860‑M1/149‑144 (MQ=255)
                                                                                                                                               cGATGGCATCTCCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGTGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACGGCTTc     <  1:152842/149‑1 (MQ=255)
                                                                                                                                               cGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACGGCTTc     <  2:126570/149‑1 (MQ=255)
                                                                                                                                               cGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACGGCTTc     >  3:33666/1‑149 (MQ=255)
                                                                                                                                                  tGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattgtgtaaattcaataaattgatcgatccacgtaggcctgataagcgtagcgcatcaggcagtt  >  8:220100‑M1/1‑3 (MQ=255)
                                                                                                                                                  tGGtgatgccatcgggctagactgttgacaaagtgcgcttagtttatgccggatgcggcgtgaacgccttatccggcctacaaaattgtgtaaattcaataaattgatcgatccacgtaggcctgataagcgtagcgcatcaggcagtt  <  8:239298‑M1/149‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
AAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGATCGATCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGCGATACTACGTTCAATCACCGCACGGCGAGTATCGTTGGCAGGTAAGAGTTTCAACATCATCTCCCACGCGGCAACGGCTTCGCC  >  NC_000913/2291189‑2291483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.