| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,282,832 | C→G | 6.9% | intergenic (+31/+108) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,282,832 | 0 | C | G | 6.9% | 323.6 / 11.8 | 98 | intergenic (+31/+108) | rplY/yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| Reads supporting (aligned to +/- strand): ref base C (47/43); new base G (4/3); total (52/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
AGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCG > NC_000913/2282688‑2282978 | aGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCcggc‑g > 1:203899/1‑149 (MQ=255) cGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑ggg < 1:227395/149‑1 (MQ=255) gAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑gggg < 8:256740/149‑1 (MQ=255) aaGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGCAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGt > 6:225753/1‑149 (MQ=255) ttCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttt > 4:257750/1‑149 (MQ=255) ttCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttt < 8:185830/149‑1 (MQ=255) cTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCCGGAGC‑GGGGttttt < 8:142657/148‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGACGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttttt < 2:272746/146‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttttt < 4:333314/146‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttttt < 5:210041/146‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTa < 7:127492/149‑1 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACAGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCCGGAGC‑GGGGtttttta < 6:63580/147‑2 (MQ=255) aCCATCGTTGTTGACGGTAAAGAAAGCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGATCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGtttttt < 1:300097/146‑1 (MQ=255) cATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATc < 1:332099/149‑1 (MQ=255) cATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATc < 3:264229/149‑1 (MQ=255) gttgACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGa < 1:42434/148‑1 (MQ=255) ttgACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTg < 7:286447/137‑1 (MQ=255) ttgACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTg > 8:286447/1‑137 (MQ=255) gACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATTGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTa < 8:261405/148‑1 (MQ=255) gACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTa < 1:282562/148‑1 (MQ=255) gACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTa < 5:154014/148‑1 (MQ=255) cGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGc < 2:241228/149‑1 (MQ=255) gTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCt > 5:167875/1‑149 (MQ=255) aaaGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGa > 7:118515/1‑149 (MQ=255) gAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCAGGGGTTTTTTGTATCTGCAGATTATGCCTGAt > 6:254996/1‑148 (MQ=255) gAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTa > 2:77092/1‑149 (MQ=255) aTCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACgg > 1:116930/1‑149 (MQ=255) aTCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTAGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATATGCAGATTATGCCTGATTACgg > 5:19906/1‑149 (MQ=255) aaaGTTCAATCTCAGGACGTACTGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGAGCGTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTa < 3:279632/148‑1 (MQ=255) aaaGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTa < 3:257750/148‑1 (MQ=255) aaaGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAt > 2:357261/1‑149 (MQ=255) gCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGGCTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAtttt < 1:26683/149‑1 (MQ=255) cTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAttttt > 7:55208/1‑149 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCTCTTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTg < 7:299854/148‑1 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCGGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAtttttt < 1:360730/147‑1 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTa < 6:177910/135‑1 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTa > 5:177910/1‑135 (MQ=255) aGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTg > 8:330559/1‑148 (MQ=255) ggACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCa < 7:55533/149‑1 (MQ=255) gACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATGAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGa < 5:185385/125‑1 (MQ=255) gACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATGAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGa > 6:185385/1‑125 (MQ=255) tACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGc > 4:206751/1‑147 (MQ=255) cAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCa > 1:122579/1‑107 (MQ=255) cAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCa < 2:122579/107‑1 (MQ=255) aGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGa > 6:327334/1‑148 (MQ=255) tCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTa < 2:54400/107‑1 (MQ=255) tCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTa > 1:54400/1‑107 (MQ=255) cccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGt > 6:281638/1‑149 (MQ=255) ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACg < 4:66608/115‑1 (MQ=255) ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACg > 3:66608/1‑115 (MQ=255) ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGTTATTTTTTGCAGGCCAGATAAGGCGtt < 8:118515/149‑1 (MQ=255) aaaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc > 1:90259/1‑149 (MQ=255) aaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg > 6:279299/1‑149 (MQ=255) aaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCCCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg > 8:234275/1‑149 (MQ=255) aCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg > 6:195955/1‑148 (MQ=255) gCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTgg > 6:191440/1‑149 (MQ=255) tGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTTCAGGCCAGATAAGGCGTTCACGCAGCATCTGGCa > 6:196883/1‑149 (MQ=255) tGCAGCACATCGACTTCGTTCGCGCTGAATTGCTGAATAACTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCa > 8:310493/1‑149 (MQ=255) gcagcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt > 1:206358/1‑149 (MQ=255) cagcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt > 7:160562/1‑149 (MQ=255) gcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa < 8:160562/149‑1 (MQ=255) caTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGaa < 2:116930/149‑1 (MQ=255) aTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGaa > 2:254922/1‑148 (MQ=255) tCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAaca > 4:172278/1‑149 (MQ=255) cGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAaca > 3:325809/1‑148 (MQ=255) aCTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca > 6:111226/1‑148 (MQ=255) cTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaa > 4:343563/1‑148 (MQ=255) ttcgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaaa > 7:275059/1‑149 (MQ=255) ttcgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTAACGCCTCATCTGGCATTCAGAACACaaaa > 7:280367/1‑149 (MQ=255) ttcgttcgCGCTTAATTGATGAATAAGTTGTAAAAAACCCAGATAAGGC‑TGGGTTTTTTGTATCTGCAGATTATTCCTGATTAAGGTATTTATATTTTTTGCAGGCCAGATAAGGCGTTAAAGCCTCATCTGGCATTCATAACAaaaa > 6:292799/1‑148 (MQ=255) cgttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaaa < 5:191440/147‑1 (MQ=255) gttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAcc < 5:279299/148‑1 (MQ=255) ttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGa < 2:64117/149‑1 (MQ=255) gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCAGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt < 5:254996/148‑1 (MQ=255) gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt < 5:111226/148‑1 (MQ=255) gcgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAAGCCGCATCTGGCATTCAGAACACAAAACCGAtt < 1:357261/148‑1 (MQ=255) gcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt < 6:167875/149‑1 (MQ=255) cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt > 2:299292/1‑149 (MQ=255) cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGACTTATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt < 5:292799/149‑1 (MQ=255) ttAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTg > 2:207308/1‑149 (MQ=255) aaTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgcc > 8:145618/1‑149 (MQ=255) aaTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc < 6:15178/148‑1 (MQ=255) aaTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc < 2:203899/148‑1 (MQ=255) tGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGa > 6:20522/1‑149 (MQ=255) tGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGAAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGa > 3:148075/1‑149 (MQ=255) gAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGAc > 5:160096/1‑149 (MQ=255) aGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAACCCGATTAATTGCCGCCAGACGTcc < 1:77092/148‑1 (MQ=255) aGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTcc < 2:206358/148‑1 (MQ=255) gatacaaaaaaCCCCGCCGGAGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAGTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAACACCGATTAATTGCCGCCAGACGTCCgg > 1:256981/6‑149 (MQ=38) gTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCgg > 8:271595/1‑149 (MQ=255) acaaaaaaCCCCGCCGGAGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGgcgc > 8:345667/3‑149 (MQ=255) aaaaaaCCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCCTCTGGCAtt > 2:242516/1‑106 (MQ=255) aaaaaCCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAGTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCta > 3:222516/1‑147 (MQ=255) aaaaaCCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGAGTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTg > 5:114250/1‑148 (MQ=255) aaaaaCCCCGCCGGAGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTg > 3:7966/1‑148 (MQ=255) aaaaaCCCCGCCGGAGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTg > 2:356005/1‑148 (MQ=255) aaaaCCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGAGTACGTTATTGCTATGTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTACTTGCCGCCAGACGGCCGGCGCTGc > 6:308712/1‑148 (MQ=39) aaCCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAAt < 7:145618/149‑1 (MQ=255) cccGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGGTCACGCCGCATCTGGCATTCAGAACACAAAACCCATTAATTGCCGCCAGACGTCCGGCGCTGCAATTgg < 5:196883/149‑1 (MQ=255) cggc‑ggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgcg < 1:254922/147‑1 (MQ=255) | AGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGC‑GGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCG > NC_000913/2282688‑2282978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |