Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,351,197 IS186 (–) +6 bp :: Δ1 bp intergenic (‑158/+205) fabI ← / ← ycjD enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 608008 =NA (NA)33 (0.670) 31/250 0.8 100% noncoding (2/1345 nt) IS186 repeat region
?NC_000913 1351197 = 0 (0.000)intergenic (‑158/+210) fabI/ycjD enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein
* ? NC_000913 = 609351NA (NA)38 (0.780) 31/248 0.8 97.3% noncoding (1345/1345 nt) IS186 repeat region
?NC_000913 = 1351202 1 (0.020)intergenic (‑163/+205) fabI/ycjD enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein

ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609200‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTACTAAAACGACGAATCGCCTGATTTTCAGG  <  NC_000913/1351202‑1351072
                                                                                                                                                                                                                                                                                           
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG                                                                                                                                        <  1:153830/149‑1
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG                                                                                                                                        <  3:87980/149‑1
 TGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAAAGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                       <  1:39386/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                     <  2:226059/149‑1
           GAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCC                                                                                                                             >  4:89003/1‑149
                        GCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAG                                                                                                                >  6:210344/1‑149
                        GCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                       <  1:266395/126‑1
                        GCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                       >  2:266395/1‑126
                                        TATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCC                                                                                                                           <  2:47850/122‑1
                                        TATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCC                                                                                                                           >  1:47850/1‑122
                                        TATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTAAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGAC                                                                                                >  1:89009/1‑149
                                         ATCCATGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG                                                                                                                                      >  3:148230/1‑110
                                          TCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCG                                                                                                       <  2:205383/140‑1
                                          TCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCG                                                                                                       >  1:205383/1‑140
                                             CTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGG                                                                                            <  6:130210/148‑1
                                             CTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGG                                                                                            >  8:166797/1‑148
                                             CTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGG                                                                                            >  5:130210/1‑148
                                              TGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGC                                                                                                                              <  1:45392/113‑1
                                                ACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAA                                                                                         <  5:11540/148‑1
                                                  AGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTA                                                                                      <  3:89003/149‑1
                                                     CTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAG                                                                                   >  3:74876/1‑149
                                                                AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGC                                                                        >  4:4942/1‑149
                                                                       GAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTT                                                                  >  2:169661/1‑148
                                                                        AACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACCGCCAGGTTGA                                                                <  7:166797/149‑1
                                                                           GCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCA                                                                      >  7:67177/1‑140
                                                                           GCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCA                                                                      <  8:67177/140‑1
                                                                             GAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATA                                                           <  1:170893/149‑1
                                                                                  ATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAAC                                                      <  5:210344/149‑1
                                                                                  ATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGA                                                                >  5:237930/1‑139
                                                                                  ATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGA                                                                <  6:237930/139‑1
                                                                                          AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATC                                              <  2:89009/149‑1
                                                                                          AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTT                                                 <  4:74876/146‑1
                                                                                           ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCT                                             >  2:25233/1‑149
                                                                                           ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGC                                                                                                                     <  5:13603/77‑1
                                                                                           ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGC                                                                                                                     >  6:13603/1‑77
                                                                                             GAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGT                                           >  2:95187/1‑149
                                                                                                          GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGA                                                                >  4:214884/1‑115
                                                                                                          GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGA                                                                <  3:214884/115‑1
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTACTAAAA                         <  1:95187/149‑1
                                                                                                                   TTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGG                                                                                            <  8:211191/78‑1
                                                                                                                      AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTACTAAAACGACGAA                  <  1:169661/149‑1
                                                                                                                      AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATC                                              <  3:71064/121‑1
                                                                                                                      AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATC                                              >  4:71064/1‑121
                                                                                                                            TTCAACCCTTAAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTAC                              >  4:203712/1‑131
                                                                                                                                      AAGTTAGCGCTTATGGGAAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTACTAAAACGACGAATCGCCTGATTTTCAGG  >  6:193249/1‑149
                                                                                                                                                                                                                                                                                           
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609200‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAAGCGCCCCCCCTGCCGCAGCCTGCTCCGGTCGGACCTGGCAACTATAGCTACTCACAGCCAGGTTGATTATAATAACCGTTTATCTGTTCGTACTGTTTACTAAAACGACGAATCGCCTGATTTTCAGG  <  NC_000913/1351202‑1351072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.