New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1474033 =	38 (1.030)	5 (0.150)	5/240	3.8	11.5%	intergenic (+20/‑188)	ydbA/ydbC	pseudogene, autotransporter homolog; interrupted by IS2 and IS30/putative NAD(P)‑binding oxidoreductase
	?	NC_000913	1474063 =	42 (1.230)					intergenic (+50/‑158)	ydbA/ydbC	pseudogene, autotransporter homolog; interrupted by IS2 and IS30/putative NAD(P)‑binding oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGTTTTATTA  >  NC_000913/1473927‑1474206                                                                                                                                         |                                                                                                                                                agTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGa                                                                                                                                     >  2:55470/1‑149 (MQ=255)       cTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTgg                                                                                                                                >  2:139917/1‑148 (MQ=255)                         aaCTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGCTCCCTAAACCGCAACGCTGAGACAGGTTGCGGTTTTGTTATTGCCGGATGTGGTACGTGACGCgttttgtgt                                                                                                             >  7:114876/1‑147 (MQ=255)                            tGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTtttgttttgt                                                                                                          >  1:87038/1‑149 (MQ=255)                              gAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTgtgt                                                                                                        >  2:51173/1‑149 (MQ=255)                                aaGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGc                                                                                                                                         >  4:70571/1‑114 (MQ=255)                                aaGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGc                                                                                                                                         <  3:70571/114‑1 (MQ=255)                                 agagGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgtt                                                                                                                   >  4:22329/1‑135 (MQ=255)                                 agagGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgtt                                                                                                                   <  3:22329/135‑1 (MQ=255)                                  gagGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCttt                                                                                                    <  1:139917/149‑1 (MQ=255)                                    ggATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCttt                                                                                                    >  3:42322/1‑147 (MQ=255)                                    ggATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCa                                                                                                  <  1:152191/149‑1 (MQ=255)                                            tCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtttttt                                                                                                                                               >  6:53181/1‑96 (MQ=255)                                            tCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtttttt                                                                                                                                               <  5:53181/96‑1 (MQ=255)                                                  aTAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtttt                                                                                                                                                 >  1:98468/1‑88 (MQ=255)                                                  aTAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGtttt                                                                                                                                                 <  2:98468/88‑1 (MQ=255)                                                  aTAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCaa                                                                                    <  1:55470/149‑1 (MQ=255)                                                        gCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATc                                                                              <  4:42322/149‑1 (MQ=255)                                                                     cTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGt                                                                  <  2:87038/148‑1 (MQ=255)                                                                        cAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTac                                                              >  3:153371/1‑149 (MQ=255)                                                                          aGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATc                                                                              >  6:51876/1‑131 (MQ=255)                                                                          aGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATc                                                                              <  5:51876/131‑1 (MQ=255)                                                                           gAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTACTCTTGTTTACAcc                                                           >  8:147491/1‑149 (MQ=255)                                                                                 gTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCa                                                     <  4:153371/149‑1 (MQ=255)                                                                                  ttCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtt                                                                                                              >  1:108010/1‑91 (MQ=255)                                                                                  ttCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtt                                                                                                              <  2:108010/91‑1 (MQ=255)                                                                                        tttttAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtttt                                                                                                            <  4:46326/87‑1 (MQ=255)                                                                                        tttttAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCgttttgtttt                                                                                                            >  3:46326/1‑87 (MQ=255)                                                                                              gCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCtt                                                         >  2:41641/1‑132 (MQ=255)                                                                                                     aTCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCttt                                                                                                    <  2:166604/82‑1 (MQ=255)                                                                                                     aTCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGAGGTGGTACGGGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTACTCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGttt                                 <  8:114876/149‑1 (MQ=255)                                                                                                       cccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTc                                >  4:4414/1‑148 (MQ=255)                                                                                                        ccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCttt                                                                                                    <  5:14210/79‑1 (MQ=255)                                                                                                        ccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCttt                                                                                                    >  6:14210/1‑79 (MQ=255)                                                                                                        ccTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCt                               <  1:51173/148‑1 (MQ=255)                                                                                                            aaCCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCttt                                       >  5:36613/1‑136 (MQ=255)                                                                                                            aaCCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCttt                                       <  6:36613/136‑1 (MQ=255)                                                                                                                    cGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTc                  >  4:152678/1‑149 (MQ=255)                                                                                                                             aGGTTGCGGTTTTTTTATTGCCGTATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGt         <  7:147491/149‑1 (MQ=255)                                                                                                                              ggTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGAt                       >  6:135278/1‑134 (MQ=255)                                                                                                                              ggTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGAt                       <  5:135278/134‑1 (MQ=255)                                                                                                                              ggTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGtt        <  3:4414/149‑1 (MQ=255)                                                                                                                                     gTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGTTttatta  >  8:45729/1‑148 (MQ=255)                                                                                                                                         |                                                                                                                                                AGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAATTTTTAGCATGTGATCCCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTTATTGCCGGATGTGGTACGTGACGCGTTTTGTTTTGTGTCTTTCAGGACAATAGAGCAACTCATCCAGTAATCTTGTTTACACCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGTTTTATTA  >  NC_000913/1473927‑1474206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.