New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 87864679 (0.870)4 (0.050) 4/246 NT 4.9% intergenic (+15/‑96) bssR/yliI repressor of biofilm formation by indole transport regulation/soluble aldose sugar dehydrogenase
?NC_000913 = 878651 81 (0.970)intergenic (+20/‑91) bssR/yliI repressor of biofilm formation by indole transport regulation/soluble aldose sugar dehydrogenase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

TGTTTGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCT  >  NC_000913/878500‑878794
                                                                                                                                                  |                                                                                                                                                    
tGTTTGATGAGTGGGCACCATGATTGCCCGACTGATATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGA                                                                                                                                                      >  3:18428‑M1/1‑147 (MQ=255)
  tttGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGc                                                                                                                                                  <  7:349447/149‑1 (MQ=255)
   ttGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCg                                                                                                                                                 >  5:382429/1‑149 (MQ=255)
     gatgaGTGGGCACCATGATTGCCCGCCTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGtc                                                                                                                                               <  5:73198‑M2/149‑3 (MQ=255)
       tgaGTGGGCACCATGATTGCCCGACTGATATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGtctc                                                                                                                                             >  4:18428‑M2/1‑145 (MQ=255)
          gTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGtctcccc                                                                                                                                          >  6:341375‑M2/1‑142 (MQ=255)
              gCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCGTGAAACTTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTc                                                                                                                                      <  5:208355/149‑1 (MQ=255)
               taCCATGATTGGCCGACTGTTATTACTTTTAATGCCGATTATGTTGAAAATTGTGTTATGAGCTTAACGGTGTGTTTCCTGATCGTGCAGAATAACGCCATGCTTGAGAAGGCCTGTAAACTAAGGGGTAGATAGCGTGTCGCACTTCa                                                                                                                                     <  6:382429/148‑1 (MQ=255)
                  cATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTACCGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGt                                                                                                                                  >  1:292286/1‑149 (MQ=255)
                   aTGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGtt                                                                                                                                 >  1:24576/1‑149 (MQ=255)
                         gCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGtt                                                                                                                           >  3:280030/1‑149 (MQ=255)
                          cccGACTGTTATTACCGTCAACGCCGATAATCTTGAAAATTGTATGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGATTGAGAAGGACTGAATACTAATGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGttt                                                                                                                          >  1:335644/1‑149 (MQ=255)
                          cccGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGttt                                                                                                                          <  6:271190/149‑1 (MQ=255)
                           ccGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGtttt                                                                                                                         >  4:69807/1‑149 (MQ=255)
                           ccGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGtttt                                                                                                                         >  7:143475/1‑149 (MQ=255)
                            cGAATGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCATAGCATGCAGAATCACTCCATGCTTGATAAGTACTGAAAACTACTGCGGAGAAAGCGTCTCCCCCTTCATGTTAAAGttttt                                                                                                                        >  2:140401/1‑149 (MQ=255)
                              aCTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGttttgg                                                                                                                       >  5:341963/1‑146 (MQ=255)
                                  ttattaCCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTaaa                                                                                                                   >  3:152724/1‑148 (MQ=255)
                                     ttaCCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAAt                                                                                                                <  4:211678/148‑1 (MQ=255)
                                       aCCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGaa                                                                                                             >  6:149546/1‑149 (MQ=255)
                                        ccGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAAt                                                                                                            <  4:71509/149‑1 (MQ=255)
                                        ccGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAAt                                                                                                            >  4:141781/1‑149 (MQ=255)
                                         cGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAAtt                                                                                                           <  7:237160/149‑1 (MQ=255)
                                          gTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAAttt                                                                                                          >  4:236931/1‑149 (MQ=255)
                                             aaCGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGt                                                                                                        <  2:26269/148‑1 (MQ=255)
                                              aCGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTGTCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTa                                                                                                      <  5:309346/149‑1 (MQ=255)
                                              aCGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGGATTTGTTa                                                                                                      >  3:259879/1‑149 (MQ=255)
                                              aCGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTa                                                                                                      >  8:276543/1‑149 (MQ=255)
                                               cGCCGATAAGCTTGTAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGATAAGGCCTGAAAACTAAGGTGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTAt                                                                                                     <  1:140401/149‑1 (MQ=255)
                                               cGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTAt                                                                                                     <  4:152724/149‑1 (MQ=255)
                                               cGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTAt                                                                                                     <  8:232938/149‑1 (MQ=255)
                                                  cGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTAtctc                                                                                                  <  7:276543/149‑1 (MQ=255)
                                                     tAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATctcctc                                                                                               <  7:400269/149‑1 (MQ=255)
                                                     tAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATctcctc                                                                                               <  1:263672/149‑1 (MQ=255)
                                                       aGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCa                                                                                             >  5:301886/1‑149 (MQ=255)
                                                       aGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCa                                                                                             <  3:69807/149‑1 (MQ=255)
                                                       aGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCa                                                                                             <  3:95797/149‑1 (MQ=255)
                                                        gCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCAc                                                                                            >  6:187041/1‑149 (MQ=255)
                                                          ttGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGt                                                                                                                      >  5:96288/1‑121 (MQ=255)
                                                          ttGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGt                                                                                                                      <  6:96288/121‑1 (MQ=255)
                                                          ttGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCATCCACt                                                                                           >  4:88612/1‑148 (MQ=255)
                                                          ttGAAAATTGTCTGATGAGCTTAACGCTGAGTAGCCAGAGCCTGCAGAAGCACGCCATGCTTGCGAAGGCCTGAAAACTAAGGGGGCGAAAGCGTCTCCCCCTTCAGGTGTAAGTTTTTGGAAACATGCATTTGTTAGCTCCTCCCCt                                                                                           >  6:213503/1‑148 (MQ=255)
                                                              aaaTTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTa                                                                                      <  5:42997/149‑1 (MQ=255)
                                                              aaaTTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTa                                                                                      <  5:149546/149‑1 (MQ=255)
                                                                aTTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACg                                                                                    >  2:110899/1‑149 (MQ=255)
                                                                       gatgaGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAcgctttctcccccttagttttcaggccttctcaagcatggcgt                                                                                                           >  6:275744‑M1/1‑76 (MQ=255)
                                                                       gatgaGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAcgctttctcccccttagttttcaggccttctcaagcatggcgt                                                                                                           <  5:275744‑M1/119‑44 (MQ=255)
                                                                         tgaGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGcc                                                                           <  3:45593/149‑1 (MQ=255)
                                                                          gaGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGc                                                                            >  3:297551/1‑147 (MQ=255)
                                                                          gaGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTGGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCGTCATGGTTAAGTTTTTGTAAAAATGAAGTTGTTATCTCCTCCACTGACTACTCGTTAAga                                                                            >  3:98073/1‑146 (MQ=255)
                                                                           aGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCa                                                                          <  6:268105/148‑1 (MQ=255)
                                                                             cTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCagag                                                                       >  6:94270/1‑149 (MQ=255)
                                                                                aaCGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTc                                                                     <  5:187041/148‑1 (MQ=255)
                                                                                  cGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAAt                                                                  >  5:122879/1‑149 (MQ=255)
                                                                                        gTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAg                                                            <  6:122879/149‑1 (MQ=255)
                                                                                        gTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAg                                                            <  3:14495/149‑1 (MQ=255)
                                                                                           tCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAcgctttctcccccttagttttcaggccttc                                                                                                                        <  4:285101‑M1/86‑31 (MQ=255)
                                                                                           tCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAcgctttctcccccttagttttcaggccttc                                                                                                                        >  3:285101‑M1/1‑56 (MQ=255)
                                                                                           tCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCg                                                         >  2:379320/1‑149 (MQ=255)
                                                                                             cAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAATCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGt                                                        <  5:360246/148‑1 (MQ=255)
                                                                                             cAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTTCGCTTTAAGCCAGAGTCAATCCGGAGGCGtg                                                       >  6:112949/1‑148 (MQ=255)
                                                                                              agagCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATTAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTa                                                      <  6:73198/149‑1 (MQ=255)
                                                                                              agagCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTa                                                      <  1:379320/149‑1 (MQ=255)
                                                                                                      cAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATc                                                <  2:292286/147‑1 (MQ=255)
                                                                                                      cAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGa                                              >  1:373691/1‑149 (MQ=255)
                                                                                                       aGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGa                                              >  1:235639/1‑148 (MQ=255)
                                                                                                         aaGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACaa                                           >  3:358621/1‑149 (MQ=255)
                                                                                                          aGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAAt                                          >  8:121643/1‑149 (MQ=255)
                                                                                                             aCGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGtctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctggatactcagcgttaagctcatc                                                                     >  6:275744‑M2/1‑43 (MQ=255)
                                                                                                             aCGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGtctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctggatactcagcgttaagctcatc                                                                     <  5:275744‑M2/119‑77 (MQ=255)
                                                                                                             aCGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCt                                       >  5:18133/1‑149 (MQ=255)
                                                                                                                 cATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGCCTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCttttt                                   >  4:139050/1‑149 (MQ=255)
                                                                                                                  aTGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTc                                  >  6:209959/1‑149 (MQ=255)
                                                                                                                   tGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGGATCGCCACTCCTTTTTcc                                 >  4:296857/1‑149 (MQ=255)
                                                                                                                     cTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCtt                               <  3:132163/149‑1 (MQ=255)
                                                                                                                     cTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCtt                               <  3:236931/149‑1 (MQ=255)
                                                                                                                     cTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTG‑TATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTtg                              <  8:125973/149‑1 (MQ=255)
                                                                                                                        gagaAGTCATGAAAACTAATGGTGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCAGTAGGCGTTATGCATCGACAATCCTTTTTCCTtg                              <  2:335644/147‑1 (MQ=255)
                                                                                                                        gagaAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTtgt                             <  2:24576/148‑1 (MQ=255)
                                                                                                                          gaAGGCCTGAAAACTAAGGGGGAGAAAGCGtctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctgga                                                                                         <  4:285101‑M2/86‑57 (MQ=255)
                                                                                                                          gaAGGCCTGAAAACTAAGGGGGAGAAAGCGtctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctgga                                                                                         >  3:285101‑M2/1‑30 (MQ=255)
                                                                                                                          gaAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGcc                          >  1:165591/1‑149 (MQ=255)
                                                                                                                          gaAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGcc                          >  7:129966/1‑149 (MQ=255)
                                                                                                                           aaGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGccc                         >  2:124345/1‑149 (MQ=255)
                                                                                                                            aGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGcccc                        <  2:373691/149‑1 (MQ=255)
                                                                                                                                cTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTAt                    <  7:257737/149‑1 (MQ=255)
                                                                                                                                  gAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTAttt                  >  5:204409/1‑149 (MQ=255)
                                                                                                                                   aaaaCTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTAtt                   <  4:297551/147‑1 (MQ=255)
                                                                                                                                       cTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGtctt             <  6:204409/149‑1 (MQ=255)
                                                                                                                                        tAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGtcttt            >  1:51121/1‑149 (MQ=255)
                                                                                                                                          aGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGtcttt            <  8:129966/147‑1 (MQ=255)
                                                                                                                                            ggggAGAcgctttctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctggatactcagcgttaagctcatcagacaattttcaagcttatcggcgttgacggtaataacagtcgggcaatcatggtgcccac        >  6:341375‑M1/1‑7 (MQ=255)
                                                                                                                                             gggAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTcc       <  2:235639/149‑1 (MQ=255)
                                                                                                                                              ggAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCg      >  5:34044/1‑149 (MQ=255)
                                                                                                                                              ggAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCg      >  4:278189/1‑149 (MQ=255)
                                                                                                                                               gagacgctttctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctggatactcagcgttaagctcatcagacaattttcaagcttatcggcgttgacggtaatatcagtcgggcaatcatggtgcccactca     >  4:18428‑M1/1‑4 (MQ=255)
                                                                                                                                               gagaAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGc     >  3:331867/1‑149 (MQ=255)
                                                                                                                                                 gacgctttctcccccttagttttcaggccttctcaagcatggcgtgcttctgcaggctctggatactcagcgttaagctcatcagacaattttcaagcttatcggcgttgacggtaataacaggcgggcaatcatggtgcccactcatc   <  5:73198‑M1/149‑148 (MQ=255)
                                                                                                                                                 gaAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGct    >  7:178977/1‑148 (MQ=255)
                                                                                                                                                  aaaGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGctct  >  5:69172/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TGTTTGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGAAAACTAAGGGGGAGAAAGCGTCTCCCCCTTCATGTTTAAGTTTTTGTAAAAATGAATTTGTTATCTCCTCCACTGACTACGCTTTAAGCCAGAGTCAATCCGGAGGCGTTATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCT  >  NC_000913/878500‑878794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.