BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 533547	86 (0.950)	4 (0.050)	3/230	NT	5.1%	coding (537/816 nt)	allR	glyoxylate‑inducible transcriptional repressor of all and gcl operons
*	?	NC_000913	= 533529	75 (0.960)	4 (0.050)	3/230	NT	5.1%	coding (519/816 nt)	allR	glyoxylate‑inducible transcriptional repressor of all and gcl operons

Only 100 of 106 total aligned reads displayed.

CAATGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAAT  >  NC_000913/533382‑533675

cAATGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTC                                                                                                                                                   <  6:344975‑M1/149‑1 (MQ=255)

 aaTGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGAGGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTct                                                                                                                                                  <  2:208306‑M2/149‑3 (MQ=255)

  aTGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCAATGGGCAGTCGTCTGCCACTGCATGCTTCAGGTGCGGGCAAAGCGATGCTTTATCCGCTGGAGGAAGAGGAGTTGATGAGCATCATTCTG                                                                                                                                                 >  5:60495‑M1/1‑149 (MQ=255)

         ggTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTACGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCG                                                                                                                                          <  6:327933‑M1/149‑1 (MQ=255)

          gTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCGTGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccgg                                                                                                                                         <  5:152266‑M2/149‑12 (MQ=255)

             ttAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTT                                                                                                                                      <  6:268070‑M1/149‑1 (MQ=255)

             ttAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACGGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggttt                                                                                                                                      <  3:297290‑M2/149‑15 (MQ=255)

               aaTTGGTCAGTTAGAGTGTAAATCTATGGTCAGGAAGTGTCAGCAAATAATAATTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTG                                                                                                                                     >  6:394289‑M1/1‑148 (MQ=255)

               aaTTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttg                                                                                                                                     >  1:207951‑M2/1‑133 (MQ=255)

               aaTTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTG                                                                                                                                     >  7:272433‑M1/1‑148 (MQ=255)

                aTTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttg                                                                                                                                     <  6:59110‑M2/147‑16 (MQ=255)

                aTTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGC                                                                                                                                    <  5:327755‑M1/148‑1 (MQ=255)

                aTTGGGCAGTTAGAGTGTAAATCGAAGGGCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgc                                                                                                                                    >  6:251867‑M2/1‑132 (MQ=255)

                 ttGGTCAGTTATAGTGTAAATAGATTGTCAGGATGTGTGCGCCACTTGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAG                                                                                                                                  <  2:101132‑M1/149‑1 (MQ=255)

                      cAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGaatga                                                                                                                             <  8:233011‑M1/149‑6 (MQ=255)

                        gTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAAACGGTTTGCAGCAGTTTa                                                                                                                           >  3:72682/1‑149 (MQ=255)

                         ttAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTAc                                                                                                                          >  2:174616/1‑149 (MQ=255)

                         ttAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTAc                                                                                                                          >  2:407506/1‑149 (MQ=255)

                              gtgtAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGGATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCaa                                                                                                                     <  7:74125/149‑1 (MQ=255)

                               tgtAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAc                                                                                                                    >  5:353597/1‑149 (MQ=255)

                                  aaaTCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgca                                                                                                                                   <  4:10619‑M2/131‑18 (MQ=255)

                                  aaaTCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgca                                                                                                                                   >  3:10619‑M2/1‑114 (MQ=255)

                                   actCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTAc                                                                                                                 <  8:29447/146‑1 (MQ=255)

                                        aTGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTtgt                                                                                                           >  5:15165/1‑149 (MQ=255)

                                        aTGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTtgt                                                                                                           >  4:105067/1‑149 (MQ=255)

                                        aTGGTCAGGATGTGTGCGCCACTGGGCAGTCGGCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTtgt                                                                                                           <  5:182283/149‑1 (MQ=255)

                                           gTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGa                                                                                                        <  3:105067/149‑1 (MQ=255)

                                            tCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGat                                                                                                       <  1:407506/149‑1 (MQ=255)

                                            tCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGa                                                                                                        >  7:251202/1‑148 (MQ=255)

                                             cAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGata                                                                                                      <  8:125001/149‑1 (MQ=255)

                                              aGGATGTGTGCGCCACTTGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGatat                                                                                                     <  5:137103/149‑1 (MQ=255)

                                              aGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGata                                                                                                      <  8:272433/148‑1 (MQ=255)

                                              aGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGata                                                                                                      <  3:70182/148‑1 (MQ=255)

                                                gATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGc                                                                                                   >  1:40995/1‑149 (MQ=255)

                                                gATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGc                                                                                                   >  6:274043/1‑149 (MQ=255)

                                                    tgtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCAc                                                                                               <  6:179376/149‑1 (MQ=255)

                                                      tgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCt                                                                                             >  4:244289/1‑149 (MQ=255)

                                                        cgcCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTg                                                                                           <  7:251251/149‑1 (MQ=255)

                                                         gcCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGc                                                                                          <  2:40995/149‑1 (MQ=255)

                                                             cTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGaa                                                                                      <  7:48215/149‑1 (MQ=255)

                                                             cTGGGCAGTCGTATGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGaa                                                                                      <  3:93142/149‑1 (MQ=255)

                                                             cTGGGCAGTCGGCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGaa                                                                                      <  1:208306/149‑1 (MQ=255)

                                                              tGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAg                                                                                     >  3:255359/1‑149 (MQ=255)

                                                                  cAGTCGTCTGCCACTGCGTGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGAcc                                                                                 <  6:152266/149‑1 (MQ=255)

                                                                   aGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCt                                                                                >  5:191113/1‑149 (MQ=255)

                                                                     tcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTg                                                                               >  5:350403/1‑148 (MQ=255)

                                                                          tGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAAc                                                                           >  7:277591/1‑147 (MQ=255)

                                                                           gCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAgg                                                                                    <  7:45978/137‑1 (MQ=255)

                                                                           gCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAgg                                                                                    >  8:45978/1‑137 (MQ=255)

                                                                            ccACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAgc                                                                       <  8:260240/149‑1 (MQ=255)

                                                                            ccACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAg                                                                        <  4:331483/148‑1 (MQ=255)

                                                                                tGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCATCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGt                                                                   >  2:340206/1‑149 (MQ=255)

                                                                                tGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGa                                                                                                        <  4:266746/112‑1 (MQ=255)

                                                                                tGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGa                                                                                                        >  3:266746/1‑112 (MQ=255)

                                                                                  cATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgcagaatgatgctcatcaactcctcttcc                                                                                                         <  1:271289‑M2/109‑44 (MQ=255)

                                                                                  cATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgcagaatgatgctcatcaactcctcttcc                                                                                                         <  1:265463‑M2/109‑44 (MQ=255)

                                                                                  cATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGaatgatgctcatcaactcctcttcc                                                                                                         <  2:271289‑M1/109‑26 (MQ=255)

                                                                                  cATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTa                                                                                                                           >  8:49373/1‑91 (MQ=255)

                                                                                   aTGCTTCCGGTGCGGGCAATGCGATGCTTTATGCTCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCTGTTTGCAGCATTTTACGCCAACTACGCTTTTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTTaa                                                                <  8:277591/149‑1 (MQ=255)

                                                                                   aTGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa                                                                >  8:270193/1‑149 (MQ=255)

                                                                                      cTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTg                                                             <  8:279621/149‑1 (MQ=255)

                                                                                      cTTCCGGGGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTg                                                             <  6:224226/149‑1 (MQ=255)

                                                                                       ttCCGGCGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTgg                                                            <  7:88417/149‑1 (MQ=255)

                                                                                           ggTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa                                                                >  4:289673/1‑141 (MQ=255)

                                                                                           ggTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa                                                                <  3:289673/141‑1 (MQ=255)

                                                                                           ggTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCta                                                        <  5:216865/149‑1 (MQ=255)

                                                                                                 ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt                                                  <  7:270193/149‑1 (MQ=255)

                                                                                                   cAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCg                                                   >  1:100447/1‑146 (MQ=255)

                                                                                                    aaaGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCg                                                   >  2:291459/1‑145 (MQ=255)

                                                                                                     aaGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGa                                               >  3:283073/1‑148 (MQ=255)

                                                                                                      aGCGCTGCTTTATGAGCTGGCTGAATAGGATTTGATGAGCATCATTCTGCAATCCGTTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATa                                             <  6:60495/149‑1 (MQ=255)

                                                                                                             ctTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGat                                                                                                       >  6:189771/1‑84 (MQ=255)

                                                                                                             ctTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGat                                                                                                       <  5:189771/84‑1 (MQ=255)

                                                                                                             ctTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAaagaa                                        <  3:244289/147‑1 (MQ=255)

                                                                                                             ctTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGGGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGACAAagaaga                                      <  5:274043/149‑1 (MQ=255)

                                                                                                                  tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAtg                                 <  4:283073/149‑1 (MQ=255)

                                                                                                                  tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAtg                                 >  3:131892/1‑149 (MQ=255)

                                                                                                                  tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAt                                  <  8:361642/148‑1 (MQ=255)

                                                                                                                    cGCTGGCTGACGAGGCGTTGATGAGACTCATTCAGCCAACCGGAGGGCCGCACTGTCCGCCACCTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTATATAAAGAAGAGCAggtt                               <  2:298648/149‑1 (MQ=255)

                                                                                                                    cGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAtgtt                               <  4:255359/149‑1 (MQ=255)

                                                                                                                      cTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCACACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAtgttgt                             <  5:59110/149‑1 (MQ=255)

                                                                                                                         gCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATAAGCCCACATTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAg                           <  1:331354/148‑1 (MQ=255)

                                                                                                                           ggAAGAGGAGTTGATGAGCATCATTctgcaaaccggtttgcagaatgatgctcatcaactcctcttccgccagcggataaagcagcgctttgcccgcaccggaagcatg                                                                <  2:271289‑M2/109‑85 (MQ=255)

                                                                                                                           ggAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGaatgatgctcatcaactcctcttccgccagcggataaagcagcgctttgcccgcaccggaagcatg                                                                <  1:271289‑M1/109‑67 (MQ=255)

                                                                                                                           ggAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGaatgatgctcatcaactcctcttccgccagcggataaagcagcgctttgcccgcaccggaagcatg                                                                >  2:265463‑M1/1‑43 (MQ=255)

                                                                                                                           ggAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGaatgatgctcatcaactcctcttccgccagcggataaagcagcgctttgcccgcaccggaagcatg                                                                <  1:265463‑M1/109‑67 (MQ=255)

                                                                                                                            gAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCt                       >  1:366144/1‑149 (MQ=255)

                                                                                                                                 ggagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAAtt                  <  6:353597/149‑1 (MQ=255)

                                                                                                                                  gagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTg                 >  5:95246/1‑149 (MQ=255)

                                                                                                                                    gTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCa               <  6:191113/149‑1 (MQ=255)

                                                                                                                                    gTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCa               <  2:100447/149‑1 (MQ=255)

                                                                                                                                     ttGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCa               >  2:277102/1‑148 (MQ=255)

                                                                                                                                       gatgaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAg            >  1:51047/1‑149 (MQ=255)

                                                                                                                                       gatgaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAg            >  5:251300/1‑149 (MQ=255)

                                                                                                                                       gatgaGCATCATTCTGCAAACCGGTTTGCAGAAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAg            >  6:342323/1‑149 (MQ=255)

                                                                                                                                            gCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGAGAACTGGGCTATACCGTAGATAAAGAAGCGCATGTGGTAGGTCTGAATTGCATAGCtg         >  4:252000/1‑146 (MQ=255)

                                                                                                                                               tcatTctgcaaaccggtttgcagaatgatgctcatcaactcctcttccgccagcggataaagcagcgctttgcccgcaccggaagcatgcagtggcagacgactgcccagtggcgcacacatcctgaccatcgatttacactctaactg    <  8:233011‑M2/149‑145 (MQ=255)

                                                                                                                                               tcatTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGc     >  3:40767/1‑148 (MQ=255)

                                                                                                                                                 atTCTTCCAACCGGATTGCAGCAGGTTACGCCAACTCCGCTTGTGGCTATGCCCACCTTGATGAAGGACCTGGAACAAGCGCGTGAACTTGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAAt  <  6:345280/149‑1 (MQ=255)

                                                                                                                                                 atTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCaa   <  6:191096/148‑1 (MQ=255)

CAATGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAAT  >  NC_000913/533382‑533675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.