| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3262188 | 37 (1.030) | 4 (0.120) | 4/236 | 3.5 | 10.6% | coding (231/2295 nt) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase |
| ? | NC_000913 | = 3262210 | 33 (0.990) | coding (209/2295 nt) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTTTCAACGGCGCATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTAC > NC_000913/3262084‑3262357 | cGTTTCAACGGCGCATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCtt > 4:154021/1‑145 (MQ=255)cGTTTCAACGGCGCATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCtt < 3:154021/145‑1 (MQ=255) cATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTcaca > 5:8481/1‑148 (MQ=255) cATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCca > 1:79780/1‑148 (MQ=255) tttGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTcc < 1:44465/149‑1 (MQ=255) ggTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCgtg < 1:37260/122‑1 (MQ=255) ggTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAAATCCgtg > 2:37260/1‑122 (MQ=255) gTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCgtggtg < 8:59606/124‑1 (MQ=255) gTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCgtggtg > 7:59606/1‑124 (MQ=255) gTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGaaa < 6:8481/148‑1 (MQ=255) gTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGa > 1:182596/1‑146 (MQ=255) atCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTc < 3:131806/73‑1 (MQ=255) atCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTc > 4:131806/1‑73 (MQ=255) ccGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCt > 7:103265/1‑149 (MQ=255) gCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGAt < 8:37523/71‑1 (MQ=255) gCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGAt > 7:37523/1‑71 (MQ=255) tcatGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCa > 6:49047/1‑111 (MQ=255) tcatGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCa < 5:49047/111‑1 (MQ=255) atGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCgt < 8:23539/102‑1 (MQ=255) atGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCgt > 7:23539/1‑102 (MQ=255) gtggCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGtt < 8:103265/148‑1 (MQ=255) tggCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATa < 7:62229/130‑1 (MQ=255) tggCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATa > 8:62229/1‑130 (MQ=255) tGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATcg > 1:57735/1‑149 (MQ=255) gTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATcgcg > 5:32186/1‑149 (MQ=255) tATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATcgcg > 2:197939/1‑148 (MQ=255) tATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATcgcg < 1:197939/148‑1 (MQ=255) tCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGtt > 1:154288/1‑128 (MQ=255) tCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGtt < 2:154288/128‑1 (MQ=255) gAAATGAACCGGCGCGTGTGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGta < 8:129010/121‑1 (MQ=255) aTCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCtt < 4:148770/107‑1 (MQ=255) aTCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCtt > 3:148770/1‑107 (MQ=255) tGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCa < 2:57735/149‑1 (MQ=255) ttGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTc > 4:14394/1‑143 (MQ=255) ttGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTc < 3:14394/143‑1 (MQ=255) ttGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTcc > 2:14803/1‑149 (MQ=255) aTTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTAc < 1:14803/149‑1 (MQ=255) | CGTTTCAACGGCGCATCCGTTTGCAGGCCAACAATTTTTTCCAGCGGCTGGTTAATATATCCCGCATCATGAGCGGTAATTGTGGTGGCAATATTGGTATCGAAATCAACCGGCGCGTGGGTTGCATTTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTAC > NC_000913/3262084‑3262357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |