New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3621402 =NA (NA)4 (0.050) 4/252 NT 100% coding (2211/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3621407 = 0 (0.000)coding (2216/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAAC  >  NC_000913/3621260‑3621537
                                                                                                                                                   |                                                                                                                                  
ggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCg                                                                                                                                   <  2:192525‑M2/2‑1 (MQ=255)
 gtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                  >  1:93043‑M2/147‑149 (MQ=255)
 gtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                  >  7:171979‑M2/147‑149 (MQ=255)
 gtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                  >  7:177341‑M2/147‑149 (MQ=255)
 gtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                  >  8:6392‑M2/147‑149 (MQ=255)
  tatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                 <  2:53397‑M2/4‑1 (MQ=255)
  tatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                 >  3:350099‑M2/146‑149 (MQ=255)
    tacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                               <  7:274471‑M2/6‑1 (MQ=255)
    tacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                               <  7:368404‑M2/6‑1 (MQ=255)
    tacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                               >  8:361639‑M2/144‑149 (MQ=255)
    tacagcggttcgccagcccctgcgcgttgtacgcatgcctggtctcatgctgccagagcagtgctcccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                               <  5:178019‑M2/6‑1 (MQ=255)
                                                                                                                   ctttctcatcatacctgtaatgcaccgccaccCGGTGCCTTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACgcgc                >  7:93102‑M2/33‑149 (MQ=255)
                                                                                                                    tttctcatcatacctgtaatgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCa                                                        >  3:53431‑M2/32‑108 (MQ=255)
                                                                                                                    tttctcatcatacctgtaatgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCa                                                        <  4:53431‑M2/77‑1 (MQ=255)
                                                                                                                                 ctgtaatgctccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGACTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAAc  >  5:144252‑M2/19‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                  
ATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAAC  >  NC_000913/3621260‑3621537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.